| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355676
Identifier: 78355676
GI number: 78355676
Start: 648049
End: 650052
Strand: Reverse
Name: 78355676
Synonym: Dde_0629
Alternate gene names: NA
Gene position: 650052-648049 (Counterclockwise)
Preceding gene: 78355677
Following gene: 78355675
Centisome position: 17.43
GC content: 62.33
Gene sequence:
>2004_bases ATGACACAAGGCAACCCCGCCCGCCAGCCCGGACTGGTACGCACGTTTCTGCAACGCACCCTGCCTTTCAGCGAACTGCC AGCAGACAGCCTGCGCCGCCTTGCAGAAGTCTGCACGGTGGAGTTTGTTCCGGAAGGTACGGCACTGCCGCACAGCGCGC AGCGCCCCGAGGCCCTGCGCGTAGTGCAGCAGGGTGCCGTGCGGCTGACAGTTGCGCAGGAAGACGGCAGCCCTGCGCTG CAGGACACCAGAGGCGAAGGCGACATCATCGGGGCCGCCGCGCTGCTGGGGCGCAGCACTGCTTCAGTACATGCAACAAC ACTGGAGGATACTTTTTTCATCCGCATACCGGGAAAAACATTTCTCGGACTTGCTTCGGAATTTCCTGCCGTAGAACGTT ATTTCATGCGCACTCTGCCGGAAGAGTACCTTACACGGGCCTTTGACGAAATGCGCCTGCGCTGCGAAGGAGCCTCCGGC AGCGGAGGTCTGTATCTTTTTTCCGGTCTGGCGGGCGATCTGGTGCACAGACCGCCGGAAACGGTGGTGCGCGGCACCAC CCTGCAGCAGGCCGCGTACCGCATGATGAAATCCGGCACAGGATCGCTGCTGGTCTGCGAAGCAGCTCCGCCGCACGGAG AACCGGACGCGGCAGACATGCACCTGCACGCTGCGGTCCGGACTGCCGCACTCGGGGGCAGCCCCGCAGCAGGGCCGGTC ATCGGCATCGTCACCGATAAAGATCTGCGCAATGCAGTGGCGCTGGGCATGGGTCACGAGGCTCCGGCGGAAACCGTCAT GTCCGCTCCGGTGGCGGCTGTGGACGAAACCTGCACCTGTTTTGACGCGCTGCTCGAAATGATGCGCCGCCAGATTCATC ACCTTGCCGTTTTGCGTGCGGGCAGGGTTGTCGGCGTCATCACGGCCCACGACATCATGGTCGTACAGGGACGCACGCCG TTTTCACTCTTCCGCGAAATAATGCAGCAGCGCGATCTGCGCAGTCTGCACCCGCTGGGCCCGCGCGTGGCGCATGTTGT GCGCGCCGTGGTCGAAGAAGGTGCCCGCGCGGCTGCGGCAGTACGCATGATAACAGTGTTCAACGACCTTTTTCTGGAAA AGGTGCTCACCCTGCTGCAGGCCGAAACGGGTCCGCCGCCGGCAAAATTCAGCTGGATGCTGCTGGGCAGCGAAGGCCGC AGAGAGCAGACCTTTGCCACCGATCAGGACAACGCCCTTGTACTGGAAGACTGCCCTGACGATATCATAGCGCGGGCTGC ACAGGTGTACTTTGACGCTTTCTGCACGCGGGCCGTGGCAGAGCTGGAAGCATGCGGTTTCGCCCGATGCGCCGGAGGCA TAATGGCTTCGGAGCCGGGCATGCGTCTGTCTGTTTCCGGCTGGCAGCGACGCTTTATCCGCTGGATACACACGCCGGAA CCGCAGGAACTGCTCAAGTCGTCAATCTTTTTCGACTTCCGCCACGGGCATGGTCATGCCCCGCTGGTACGGCACCTGCG TGAATCGGTGGCTGCCGCGGCGCAGGCCGATCAGGTCTTTCTGCGTCATCTGGCCGCAGACGCACTGCGCGACCGGCCGC CCCTGTCTTTTTTCCGCAACCTTGTGGTCGAAAAAAGCGGAGACCACCGGAACATGCTGGATATCAAACGCCGCGGCATG CTGCCTTTCGTCAATATTGCACGCCTGATGGCGCTGGCGCACGGCATTGACGAAACATCCACGCCGGACAGGCTGACGGC GCTGGAACAGGAAGGTCACATGCCCGCCCAGCTGTGCCGCGAGGCGCGCGAAGGCTACGAGTTTCTCATGCATGTCCGGC TGGTACACCAGCTGGGACAGATACGGCGCGGCGAACCCGCGGGAAATCATATTTCACCGGCCGAACTGACCGGACTGGAA AAACGGACGCTCAAAGAGGTGTTTGCCGTAACCGAGCGGCTGCAGGCATTCACCCGGCAACGTTTCAAGCTGGATGTGTC CTGA
Upstream 100 bases:
>100_bases GACGGCATGGCGGACGGCGTCCTGCTAAACCGGCCCTGCGGGGGACGGCTGCAGGACACGCCCGGCCGTCCGCCGCTTTT ACCGCTGCACAGGAGAAGCC
Downstream 100 bases:
>100_bases AAGTTCTGTGCACGCAGCAGGCGTGTACAGCTATCCGGAGAAGTTATTATGGGAATACGCTCGTTATTGCGCAGCCTGCG CCACAGACCGCCGCTGCATC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; Signal Protein; CBS Domain Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; Cyclic-Nucleotide Signal Transduction Protein; DNA Polymerase III Subunit Epsilon; Multidomain-Containing Protein; CBS Signal-Transduction Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A
Number of amino acids: Translated: 667; Mature: 666
Protein sequence:
>667_residues MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALRVVQQGAVRLTVAQEDGSPAL QDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASG SGGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRAGRVVGVITAHDIMVVQGRTP FSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGR REQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHRNMLDIKRRGM LPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCREAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLE KRTLKEVFAVTERLQAFTRQRFKLDVS
Sequences:
>Translated_667_residues MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALRVVQQGAVRLTVAQEDGSPAL QDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASG SGGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRAGRVVGVITAHDIMVVQGRTP FSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGR REQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHRNMLDIKRRGM LPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCREAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLE KRTLKEVFAVTERLQAFTRQRFKLDVS >Mature_666_residues TQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALRVVQQGAVRLTVAQEDGSPALQ DTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKTFLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASGS GGLYLFSGLAGDLVHRPPETVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPVI GIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRAGRVVGVITAHDIMVVQGRTPF SLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAAVRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGRR EQTFATDQDNALVLEDCPDDIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPEP QELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRNLVVEKSGDHRNMLDIKRRGML PFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCREAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEK RTLKEVFAVTERLQAFTRQRFKLDVS
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73221; Mature: 73090
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS50042 CNMP_BINDING_3 ; PS00527 RIBOSOMAL_S14
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALR CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH VVQQGAVRLTVAQEDGSPALQDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKT HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEEECCHH FLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASGSGGLYLFSGLAGDLVHRPPE HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCHHHHHCCCHH TVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV HHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRA EEEEECHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRVVGVITAHDIMVVQGRTPFSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAA CCEEEEEEECEEEEEECCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHH VRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGRREQTFATDQDNALVLEDCPD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCH DIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEECCCCCEEEHHHHHHHHHHHHCCCC PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRN HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LVVEKSGDHRNMLDIKRRGMLPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCR HHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH EAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEKRTLKEVFAVTERLQAFTRQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH RFKLDVS HHEECCC >Mature Secondary Structure TQGNPARQPGLVRTFLQRTLPFSELPADSLRRLAEVCTVEFVPEGTALPHSAQRPEALR CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH VVQQGAVRLTVAQEDGSPALQDTRGEGDIIGAAALLGRSTASVHATTLEDTFFIRIPGKT HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEEECCHH FLGLASEFPAVERYFMRTLPEEYLTRAFDEMRLRCEGASGSGGLYLFSGLAGDLVHRPPE HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCHHHHHCCCHH TVVRGTTLQQAAYRMMKSGTGSLLVCEAAPPHGEPDAADMHLHAAVRTAALGGSPAAGPV HHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCE IGIVTDKDLRNAVALGMGHEAPAETVMSAPVAAVDETCTCFDALLEMMRRQIHHLAVLRA EEEEECHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRVVGVITAHDIMVVQGRTPFSLFREIMQQRDLRSLHPLGPRVAHVVRAVVEEGARAAAA CCEEEEEEECEEEEEECCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHH VRMITVFNDLFLEKVLTLLQAETGPPPAKFSWMLLGSEGRREQTFATDQDNALVLEDCPD HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCH DIIARAAQVYFDAFCTRAVAELEACGFARCAGGIMASEPGMRLSVSGWQRRFIRWIHTPE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEECCCCCEEEHHHHHHHHHHHHCCCC PQELLKSSIFFDFRHGHGHAPLVRHLRESVAAAAQADQVFLRHLAADALRDRPPLSFFRN HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LVVEKSGDHRNMLDIKRRGMLPFVNIARLMALAHGIDETSTPDRLTALEQEGHMPAQLCR HHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHH EAREGYEFLMHVRLVHQLGQIRRGEPAGNHISPAELTGLEKRTLKEVFAVTERLQAFTRQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH RFKLDVS HHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA