| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yyaM [H]
Identifier: 78355577
GI number: 78355577
Start: 536390
End: 537415
Strand: Reverse
Name: yyaM [H]
Synonym: Dde_0530
Alternate gene names: 78355577
Gene position: 537415-536390 (Counterclockwise)
Preceding gene: 78355580
Following gene: 78355572
Centisome position: 14.41
GC content: 59.16
Gene sequence:
>1026_bases ATGAAAAAGTCATCGACTCCACCTGATCTTATCCTGTATACGCCTGCAAGGCGTCCAATGTTATGTCTCACCTTCACTCC TGCGTCACGCAGCCGTGCAGGCCGCCTGCCGCAACCGGAGTATGGCACACGTTTTCTGCAATTCCATGCCGGAATAAGTA TGATCTACCTGAAACTTGTTCTTTCCGCACTCATCTGGGGCGGAACATTTGTGGCGGGACGTCTGGCAGCGGCCGAACTC GGCCCCTTTTCCTGTGCATTTCTGCGTTTTGCCATGGCCTCGGTATGCCTGACCTTCCTCGCCCGCCTGCAGGAAGGCGG ACTGCCCGCCCTGACGCGCAAAACCCTTCCGGGCGTGCTGCTGCTGGGGCTGTCCGGCGTATTCGCCTACAATGCCTTTT TCTTTCTGGGGCTTCAGACCGTAGCTGCCGGTCGCGCTGCAGTAATCATTGCCCTAAACCCCGTATTCATAGCTCTTTTC GCCGCGCTTCTGCTGCGCGAGCCGCTGTCCGGCCTGCGCCTGACAGGAATAGCACTCTCTGTCTGCGGCGCCATCACCGT CATCTCACGGGCGGACCCGCTGGCCCTGTTCACACACGCGCTTTCCGCAGGAGACATGGCCATCTTCGGATGTGTGGCAA GCTGGGTGACTTACTCATTGGCCGGACGCAAAGTCATGGCCGATCTGTCGCCGCTGGCATCGGTAACATGGTCATGCATC ACCGGCGCGCTCATGCTGTTTCCTTTCGCCCTGTCCGAAGGCCTTCCGGCCCGCATGGGTTCCATCTCACTCACCACATG GACATCCATAACCTATCTTGCCCTGCTGGGCACCGTGGCGGCATTCACATGGTTTTATCAGGGGGTCAAAGCCATAGGAG CATCACGCGCAGGCGTTTTCATCAACATTGTGCCGGTAAGCGCAATTCTGCTGGCTGCCCTGCTGCTGGACGAACCCGTG GCCCTTTCGCTGCTGGGCGGCGCAGTGCTGGTAGGCTGCGGCGTGTGGCTGACCAACAGACACTGA
Upstream 100 bases:
>100_bases GGAGGGGTTTTTACAGTTTCAGCATGCCCCGCAGCGGCCAGCATCCACAACAACGCCGCAGCAGCCAGCACGGCCGCGGA ACGGCATCCCCTTATGCGCA
Downstream 100 bases:
>100_bases GCGCTTACAGCCCCGCAGACAGGCTTCAATCAGCTTCTGCGTCACGATAACGGGCCGCAGCCCGCACAAAATTCACTGCC CAGTGCGGTTCGCCCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLVLSALIWGGTFVAGRLAAAEL GPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVLLLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALF AALLLREPLSGLRLTGIALSVCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVFINIVPVSAILLAALLLDEPV ALSLLGGAVLVGCGVWLTNRH
Sequences:
>Translated_341_residues MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLVLSALIWGGTFVAGRLAAAEL GPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVLLLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALF AALLLREPLSGLRLTGIALSVCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVFINIVPVSAILLAALLLDEPV ALSLLGGAVLVGCGVWLTNRH >Mature_341_residues MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLVLSALIWGGTFVAGRLAAAEL GPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVLLLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALF AALLLREPLSGLRLTGIALSVCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVFINIVPVSAILLAALLLDEPV ALSLLGGAVLVGCGVWLTNRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35961; Mature: 35961
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLV CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LSALIWGGTFVAGRLAAAELGPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVL HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHH LLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALFAALLLREPLSGLRLTGIALS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHH VCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVF HHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE INIVPVSAILLAALLLDEPVALSLLGGAVLVGCGVWLTNRH EEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLV CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LSALIWGGTFVAGRLAAAELGPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVL HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHH LLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALFAALLLREPLSGLRLTGIALS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHH VCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVF HHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE INIVPVSAILLAALLLDEPVALSLLGGAVLVGCGVWLTNRH EEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]