Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yyaM [H]

Identifier: 78355577

GI number: 78355577

Start: 536390

End: 537415

Strand: Reverse

Name: yyaM [H]

Synonym: Dde_0530

Alternate gene names: 78355577

Gene position: 537415-536390 (Counterclockwise)

Preceding gene: 78355580

Following gene: 78355572

Centisome position: 14.41

GC content: 59.16

Gene sequence:

>1026_bases
ATGAAAAAGTCATCGACTCCACCTGATCTTATCCTGTATACGCCTGCAAGGCGTCCAATGTTATGTCTCACCTTCACTCC
TGCGTCACGCAGCCGTGCAGGCCGCCTGCCGCAACCGGAGTATGGCACACGTTTTCTGCAATTCCATGCCGGAATAAGTA
TGATCTACCTGAAACTTGTTCTTTCCGCACTCATCTGGGGCGGAACATTTGTGGCGGGACGTCTGGCAGCGGCCGAACTC
GGCCCCTTTTCCTGTGCATTTCTGCGTTTTGCCATGGCCTCGGTATGCCTGACCTTCCTCGCCCGCCTGCAGGAAGGCGG
ACTGCCCGCCCTGACGCGCAAAACCCTTCCGGGCGTGCTGCTGCTGGGGCTGTCCGGCGTATTCGCCTACAATGCCTTTT
TCTTTCTGGGGCTTCAGACCGTAGCTGCCGGTCGCGCTGCAGTAATCATTGCCCTAAACCCCGTATTCATAGCTCTTTTC
GCCGCGCTTCTGCTGCGCGAGCCGCTGTCCGGCCTGCGCCTGACAGGAATAGCACTCTCTGTCTGCGGCGCCATCACCGT
CATCTCACGGGCGGACCCGCTGGCCCTGTTCACACACGCGCTTTCCGCAGGAGACATGGCCATCTTCGGATGTGTGGCAA
GCTGGGTGACTTACTCATTGGCCGGACGCAAAGTCATGGCCGATCTGTCGCCGCTGGCATCGGTAACATGGTCATGCATC
ACCGGCGCGCTCATGCTGTTTCCTTTCGCCCTGTCCGAAGGCCTTCCGGCCCGCATGGGTTCCATCTCACTCACCACATG
GACATCCATAACCTATCTTGCCCTGCTGGGCACCGTGGCGGCATTCACATGGTTTTATCAGGGGGTCAAAGCCATAGGAG
CATCACGCGCAGGCGTTTTCATCAACATTGTGCCGGTAAGCGCAATTCTGCTGGCTGCCCTGCTGCTGGACGAACCCGTG
GCCCTTTCGCTGCTGGGCGGCGCAGTGCTGGTAGGCTGCGGCGTGTGGCTGACCAACAGACACTGA

Upstream 100 bases:

>100_bases
GGAGGGGTTTTTACAGTTTCAGCATGCCCCGCAGCGGCCAGCATCCACAACAACGCCGCAGCAGCCAGCACGGCCGCGGA
ACGGCATCCCCTTATGCGCA

Downstream 100 bases:

>100_bases
GCGCTTACAGCCCCGCAGACAGGCTTCAATCAGCTTCTGCGTCACGATAACGGGCCGCAGCCCGCACAAAATTCACTGCC
CAGTGCGGTTCGCCCGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLVLSALIWGGTFVAGRLAAAEL
GPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVLLLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALF
AALLLREPLSGLRLTGIALSVCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI
TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVFINIVPVSAILLAALLLDEPV
ALSLLGGAVLVGCGVWLTNRH

Sequences:

>Translated_341_residues
MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLVLSALIWGGTFVAGRLAAAEL
GPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVLLLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALF
AALLLREPLSGLRLTGIALSVCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI
TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVFINIVPVSAILLAALLLDEPV
ALSLLGGAVLVGCGVWLTNRH
>Mature_341_residues
MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLVLSALIWGGTFVAGRLAAAEL
GPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVLLLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALF
AALLLREPLSGLRLTGIALSVCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI
TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVFINIVPVSAILLAALLLDEPV
ALSLLGGAVLVGCGVWLTNRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35961; Mature: 35961

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLV
CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LSALIWGGTFVAGRLAAAELGPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVL
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHH
LLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALFAALLLREPLSGLRLTGIALS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHH
VCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVF
HHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
INIVPVSAILLAALLLDEPVALSLLGGAVLVGCGVWLTNRH
EEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MKKSSTPPDLILYTPARRPMLCLTFTPASRSRAGRLPQPEYGTRFLQFHAGISMIYLKLV
CCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LSALIWGGTFVAGRLAAAELGPFSCAFLRFAMASVCLTFLARLQEGGLPALTRKTLPGVL
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHH
LLGLSGVFAYNAFFFLGLQTVAAGRAAVIIALNPVFIALFAALLLREPLSGLRLTGIALS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHH
VCGAITVISRADPLALFTHALSAGDMAIFGCVASWVTYSLAGRKVMADLSPLASVTWSCI
HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TGALMLFPFALSEGLPARMGSISLTTWTSITYLALLGTVAAFTWFYQGVKAIGASRAGVF
HHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
INIVPVSAILLAALLLDEPVALSLLGGAVLVGCGVWLTNRH
EEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]