| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355550
Identifier: 78355550
GI number: 78355550
Start: 510509
End: 511069
Strand: Reverse
Name: 78355550
Synonym: Dde_0503
Alternate gene names: NA
Gene position: 511069-510509 (Counterclockwise)
Preceding gene: 78355551
Following gene: 78355549
Centisome position: 13.7
GC content: 63.28
Gene sequence:
>561_bases ATGACACAACCGGAGAAAAAATCGGCCCCTGCGGGATACCTGTGCAAAATGCGGGGCTGTGCAACCAATGACTGGCGCCC CTGCATGCACGAAGCCTGCTGGTCAGCCGCAGGTGCTTTTGCGGGCATCCTGCTGCTGGGACTGCTCAATTCGTTTCTTT CCCGCGCAGACAGCGTGCTGCTGATAGGGTCCTTCGGCGCATCGGCAGTGCTGGCCTACGGCGCCCCCGATGCTCCTCTG TCGCAGCCGCGCAATCTGGTGGGCGGGCACCTGCTGTCGGCCGCGACAGGCGTTGCCTGTTTCCAACTGCTGGGCAACGA CGCCTTTGCCGCGGCGGCGGCTGTTTCGCTGGCCATTTTTTTCATGCATCTTACCGGCACGCTGCATCCTTCGGGCGGTG CCACCGCGCTTATCGCCGTTATCGGCAGCCCCGCCGTGCACGCGCTGGGCTACATGTATGTAATCATACCCGCCGGCGCG GGTGCAGCCATCATTCTGGGCGTGGCTCTTGTGGTCAACAACCTCAGCCGCAGGCGCAGTTATCCGCGCTGGTGGTGGTG A
Upstream 100 bases:
>100_bases GGCTTTTTTTAAACGCACGGCCGGGCGTGGCGGTACACACCGCATGCCGGATGTGACGCAGGTCACAGTGTTCCGCCGCA GGACAGGGCATATCCGGCAC
Downstream 100 bases:
>100_bases GTGTCTCATACTCTTGCGCTGATGCCCCCGACAACGTACTATGCCCGACTGTTACTTCCCGTCCGGAATCGCAAGTCTCC GGCACATCCCGCAAGGAGAA
Product: HPP family membrane protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; CBS Domain-Containing Protein; HPP Family Protein+B; HPP Domain-Containing Protein; HPP Family Membrane Protein; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; Cbs Domain Containing Membrane Protein; HPP Family; HPP Domain Protein; CbsHpp
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTQPEKKSAPAGYLCKMRGCATNDWRPCMHEACWSAAGAFAGILLLGLLNSFLSRADSVLLIGSFGASAVLAYGAPDAPL SQPRNLVGGHLLSAATGVACFQLLGNDAFAAAAAVSLAIFFMHLTGTLHPSGGATALIAVIGSPAVHALGYMYVIIPAGA GAAIILGVALVVNNLSRRRSYPRWWW
Sequences:
>Translated_186_residues MTQPEKKSAPAGYLCKMRGCATNDWRPCMHEACWSAAGAFAGILLLGLLNSFLSRADSVLLIGSFGASAVLAYGAPDAPL SQPRNLVGGHLLSAATGVACFQLLGNDAFAAAAAVSLAIFFMHLTGTLHPSGGATALIAVIGSPAVHALGYMYVIIPAGA GAAIILGVALVVNNLSRRRSYPRWWW >Mature_185_residues TQPEKKSAPAGYLCKMRGCATNDWRPCMHEACWSAAGAFAGILLLGLLNSFLSRADSVLLIGSFGASAVLAYGAPDAPLS QPRNLVGGHLLSAATGVACFQLLGNDAFAAAAAVSLAIFFMHLTGTLHPSGGATALIAVIGSPAVHALGYMYVIIPAGAG AAIILGVALVVNNLSRRRSYPRWWW
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19254; Mature: 19122
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPEKKSAPAGYLCKMRGCATNDWRPCMHEACWSAAGAFAGILLLGLLNSFLSRADSVL CCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LIGSFGASAVLAYGAPDAPLSQPRNLVGGHLLSAATGVACFQLLGNDAFAAAAAVSLAIF EEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FMHLTGTLHPSGGATALIAVIGSPAVHALGYMYVIIPAGAGAAIILGVALVVNNLSRRRS HHHHHCCCCCCCCCEEEHHHHCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC YPRWWW CCCCCC >Mature Secondary Structure TQPEKKSAPAGYLCKMRGCATNDWRPCMHEACWSAAGAFAGILLLGLLNSFLSRADSVL CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LIGSFGASAVLAYGAPDAPLSQPRNLVGGHLLSAATGVACFQLLGNDAFAAAAAVSLAIF EEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FMHLTGTLHPSGGATALIAVIGSPAVHALGYMYVIIPAGAGAAIILGVALVVNNLSRRRS HHHHHCCCCCCCCCEEEHHHHCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC YPRWWW CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA