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The map label for this gene is amsJ [H]

Identifier: 78355466

GI number: 78355466

Start: 417576

End: 418817

Strand: Reverse

Name: amsJ [H]

Synonym: Dde_0419

Alternate gene names: 78355466

Gene position: 418817-417576 (Counterclockwise)

Preceding gene: 78355467

Following gene: 78355465

Centisome position: 11.23

GC content: 62.88

Gene sequence:

>1242_bases
ATGACGCCCACCATTGTGTTTGACGGCGGCTACACCCTGTGGAGCGCCGGTGACGACGCGCCGCTTGCCTTTATGACCGA
CGGACTTGCCCGCCGTCTGGGCACCCCCGTGTTCAAGGCGTTTGTCCGGCATCCCCATGCCTCTTTTGACAGACGGTTCG
GCGTGCAGACACTGCCCAATCTGGAGCATGAATCCAAAGCCGGAGCCGCGGGACGCTGGTTCCGCGGGCTAAATTTTACC
GATCCGCGCGGCGAACTTGCGGCTGTTGCCGACACCGTTGCACAGGCTGATCTTCTGATCATGGGAGCGGGCAACTTCAT
CACCGAAGTGGGCATGGACGTGCTGCGCGGCCATCTTCCGCGGTTCTGCACCATGGCTCTCATGGCCCAGATGGCCGGAA
CGCCGTATATGCTCTTCGGACTGAGCGCCAATGTGCTGCACAATCCGTGGGCCGTCCGCGCAGCAGGCTGGCTGCTGCGG
GGTGCCGCCGCTGTCACCTTCCGCGAGCGCATGGCCGTGGAAAATCTGCGCGCCTGCGGCGTGGCCCTGCCGGAGCATAC
GCTGCTGCCCGATGCCGCTCTGGGCGCACCCCGTGCACCGCAGGGACGCGGAGACGAAATACTGCGGCAGGAACAAATTC
CTTCCCGTACTGCTGGACTCAGGCTGGCACTGGCCGTACGCGACCTGTCGTGGATGGGCAGCCATGCCGCCGCACTGTAC
GAACGGCATCAGACAGAACTGATAAACCTGTGGTGCGCCCGCAAGGACAACGACGTGCTGCTGGTGCCGCAGTGCTGCTA
CCATGCCGATTCCGGCATCACCGACGACAGAGTTCTGGGCCGCACCCTGCGCGGACGCAGCCGGTTTTCTGACAAAGTGC
ATGTAATTGAGGGCTGTTACCATTACGACGACATAGAATCGCTGTACACACAGGCTGACTGTGCCGTGGCCACGCGCCTG
CACGGCAGCGTGTTTGCCGCACGCATGGGCATACCCGTTGTGGGGCTGGCATACGAAGACAAGGTGCGCGGATTTTTCGG
ACAGCTGCAGGCGGAAGACCAGTGCCTGCCGTGGGATGCACCGGCAACGGATATTCTGGCCCTGCTGGACAGCCTGATGC
TACGGGTGCAGGCCGTGCGCGACCACATGCTGCACCGTATAGAACAGCTGCAACAGCAGCTTGCAGGCTACATCGACATT
GCGGCAGCACTTGCCGCCCCTGCCGGAGACCACACTCCATGA

Upstream 100 bases:

>100_bases
GCGGACCGCAGGGCGGACTGCGCAGAACGCTGTACCGTGCCCTTGCGGAACAGGGAGCGGGCCGCTCACTTCTTGTTTAC
GCGGTAAAAGGAACTACCGA

Downstream 100 bases:

>100_bases
AACCCTGCATACTGATAGTGGGCGCGGGCCCCAACCAGCTGCCCGCCATAGAAAAAGCCCTTGAGCGCGGATACGAGGTG
GCCGCGACGGACATGAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTPTIVFDGGYTLWSAGDDAPLAFMTDGLARRLGTPVFKAFVRHPHASFDRRFGVQTLPNLEHESKAGAAGRWFRGLNFT
DPRGELAAVADTVAQADLLIMGAGNFITEVGMDVLRGHLPRFCTMALMAQMAGTPYMLFGLSANVLHNPWAVRAAGWLLR
GAAAVTFRERMAVENLRACGVALPEHTLLPDAALGAPRAPQGRGDEILRQEQIPSRTAGLRLALAVRDLSWMGSHAAALY
ERHQTELINLWCARKDNDVLLVPQCCYHADSGITDDRVLGRTLRGRSRFSDKVHVIEGCYHYDDIESLYTQADCAVATRL
HGSVFAARMGIPVVGLAYEDKVRGFFGQLQAEDQCLPWDAPATDILALLDSLMLRVQAVRDHMLHRIEQLQQQLAGYIDI
AAALAAPAGDHTP

Sequences:

>Translated_413_residues
MTPTIVFDGGYTLWSAGDDAPLAFMTDGLARRLGTPVFKAFVRHPHASFDRRFGVQTLPNLEHESKAGAAGRWFRGLNFT
DPRGELAAVADTVAQADLLIMGAGNFITEVGMDVLRGHLPRFCTMALMAQMAGTPYMLFGLSANVLHNPWAVRAAGWLLR
GAAAVTFRERMAVENLRACGVALPEHTLLPDAALGAPRAPQGRGDEILRQEQIPSRTAGLRLALAVRDLSWMGSHAAALY
ERHQTELINLWCARKDNDVLLVPQCCYHADSGITDDRVLGRTLRGRSRFSDKVHVIEGCYHYDDIESLYTQADCAVATRL
HGSVFAARMGIPVVGLAYEDKVRGFFGQLQAEDQCLPWDAPATDILALLDSLMLRVQAVRDHMLHRIEQLQQQLAGYIDI
AAALAAPAGDHTP
>Mature_412_residues
TPTIVFDGGYTLWSAGDDAPLAFMTDGLARRLGTPVFKAFVRHPHASFDRRFGVQTLPNLEHESKAGAAGRWFRGLNFTD
PRGELAAVADTVAQADLLIMGAGNFITEVGMDVLRGHLPRFCTMALMAQMAGTPYMLFGLSANVLHNPWAVRAAGWLLRG
AAAVTFRERMAVENLRACGVALPEHTLLPDAALGAPRAPQGRGDEILRQEQIPSRTAGLRLALAVRDLSWMGSHAAALYE
RHQTELINLWCARKDNDVLLVPQCCYHADSGITDDRVLGRTLRGRSRFSDKVHVIEGCYHYDDIESLYTQADCAVATRLH
GSVFAARMGIPVVGLAYEDKVRGFFGQLQAEDQCLPWDAPATDILALLDSLMLRVQAVRDHMLHRIEQLQQQLAGYIDIA
AALAAPAGDHTP

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor [H]

COG id: COG2327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007345 [H]

Pfam domain/function: PF04230 PS_pyruv_trans [H]

EC number: NA

Molecular weight: Translated: 45202; Mature: 45071

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTIVFDGGYTLWSAGDDAPLAFMTDGLARRLGTPVFKAFVRHPHASFDRRFGVQTLPN
CCCEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCCC
LEHESKAGAAGRWFRGLNFTDPRGELAAVADTVAQADLLIMGAGNFITEVGMDVLRGHLP
CCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHH
RFCTMALMAQMAGTPYMLFGLSANVLHNPWAVRAAGWLLRGAAAVTFRERMAVENLRACG
HHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VALPEHTLLPDAALGAPRAPQGRGDEILRQEQIPSRTAGLRLALAVRDLSWMGSHAAALY
CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCHHHCEEEEEEHHHHHHHHHHHHHHH
ERHQTELINLWCARKDNDVLLVPQCCYHADSGITDDRVLGRTLRGRSRFSDKVHVIEGCY
HHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
HYDDIESLYTQADCAVATRLHGSVFAARMGIPVVGLAYEDKVRGFFGQLQAEDQCLPWDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
PATDILALLDSLMLRVQAVRDHMLHRIEQLQQQLAGYIDIAAALAAPAGDHTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TPTIVFDGGYTLWSAGDDAPLAFMTDGLARRLGTPVFKAFVRHPHASFDRRFGVQTLPN
CCEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCCC
LEHESKAGAAGRWFRGLNFTDPRGELAAVADTVAQADLLIMGAGNFITEVGMDVLRGHLP
CCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHH
RFCTMALMAQMAGTPYMLFGLSANVLHNPWAVRAAGWLLRGAAAVTFRERMAVENLRACG
HHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VALPEHTLLPDAALGAPRAPQGRGDEILRQEQIPSRTAGLRLALAVRDLSWMGSHAAALY
CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCHHHCEEEEEEHHHHHHHHHHHHHHH
ERHQTELINLWCARKDNDVLLVPQCCYHADSGITDDRVLGRTLRGRSRFSDKVHVIEGCY
HHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
HYDDIESLYTQADCAVATRLHGSVFAARMGIPVVGLAYEDKVRGFFGQLQAEDQCLPWDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
PATDILALLDSLMLRVQAVRDHMLHRIEQLQQQLAGYIDIAAALAAPAGDHTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]