| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is hflX [H]
Identifier: 78355423
GI number: 78355423
Start: 370684
End: 372156
Strand: Reverse
Name: hflX [H]
Synonym: Dde_0376
Alternate gene names: 78355423
Gene position: 372156-370684 (Counterclockwise)
Preceding gene: 78355424
Following gene: 78355422
Centisome position: 9.98
GC content: 61.98
Gene sequence:
>1473_bases ATGCTCGACAGACAGGGCAGGGTTTCTCTGGTTATTGTGGGCGATACGGGCTCCATCTATATTCCCGAGCTTCCCCGCGC CCGAACGGGCGCGGGCAGGCTGCGGGGGCTCAGGCTGCTGCACACCCACCTGACTGACTCCCTGCTTTCGCAGGAAGACC TCATGGACATGCTGTTTCTGCGTCTTGACGACGTGGGCGTGCTCACCGTGGACCAGCACGGCGGGCCGGCCAGCTTTCAG CATGCGCATCTGCTGCCCGGCGGCACACAGCCCTACATGGTGCACGACCCGCAGGGGTGGGACAGGGTAATAACAGATTT CACCGCACAGGCGCAGGCGCTGGAAGAAGAACTTTCGCGCATCACCGCCGATGCCCGCGAAACCGGCAGCGAATCCGGCA GGGCAGTGCTGGTGAGTGTTTCTCCCGACCCGCGTTCCGTGCAGGAATCGTCGCTGGCCGAACTGGCCGAACTGGCCGAT ACCGCCGGGCTGACCGTGGCGGGCACCATGGTGCAGCGCGTACGGCAGCTCAACTACAAATTCATTCTGGGCAAGGGCAA ACTGGCCGAACTTGAAGTGCTTGCGCTTACGGCAAACGCCGGAGTCATCCTTTTTGACGGAGAACTGTCGCCCGCGCAGC TGCACAACCTTGCCGATATCACCGAACGCAAGGTTATAGACCGCACCCAGCTTATTCTGGATATTTTCGCCCAGCGCGCT TCCACGCGTGCGGGCAAACTGCAGGTGGAACTGGCCCAGCTGCAATACACACAGCCCCGCCTGACCGGAAAAAACCGCGC CATGGACAGGCTGGCAGGCGGCATTGGCGGCCGCGGCCCCGGTGAAACCAAACTGGAAACCGACCGCCGCAAGGTGCGCG AACGCATAGCCCGCATCAAGCAGGACCTCAAAGCTCTGCGCACCCAGCGCGGTTTCACCCGCGGCCGCAGAGCCAAGGCG CGTGTGCCTGTGGCATCGCTGGTGGGGTACACCAACGCGGGCAAATCAACGCTGCTCAACACTCTGACCAATGCAGACGT GCTGGCCGAAGACAAGCTGTTTGCCACGCTGGACACCACCACCCGCAGACTGCGCTTTCCGCAGGAACGCGAACTCATCG TCACCGACACGGTGGGTTTCATCCGCTCGCTGCCCAAGGAACTCAAAGAGGCATTCCGGGCCACTCTTGAAGAACTGGAA GCCGCTGATCTGCTGCTGCATGTGGCCGATGCCGGACACCCCGAGCTGGAAATGCAGCTGCGCGCGGTGGAAGAGATTCT GGACGAGCTGGAACTGCAGGATATTCCGCGGCTTCTGGTGCTCAACAAATGGGAAACGCTGGACGATGAAACCCGTCTGG CCCTTGCCGCCCTGTACCCTGCCGCCATCCGCGTTTCCGCCAGAACACGGCTTGGCCTTGATGACCTCACCGCAGAAATC ATCAGACGCATAGACTGGGAGCGGATGCTGTAG
Upstream 100 bases:
>100_bases TCTGTACACACGCCGCTACCCTGCCGAGGGCGGCTACACCACGGAACAGGCAAGAGAACTGGCCGCCCTGAGCCGCAGCA TAGGCCGTCAGATAGGGCTG
Downstream 100 bases:
>100_bases CCGGCCCCTGCAGCCTCCGCGTATTAACCGCCGCACACAACCGTAAGCCGGGGCCTGCACGGCAGAACACGCTGCGGCCT ATTCCGCACAGGCCGCAGGC
Product: GTP-binding protein HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MLDRQGRVSLVIVGDTGSIYIPELPRARTGAGRLRGLRLLHTHLTDSLLSQEDLMDMLFLRLDDVGVLTVDQHGGPASFQ HAHLLPGGTQPYMVHDPQGWDRVITDFTAQAQALEEELSRITADARETGSESGRAVLVSVSPDPRSVQESSLAELAELAD TAGLTVAGTMVQRVRQLNYKFILGKGKLAELEVLALTANAGVILFDGELSPAQLHNLADITERKVIDRTQLILDIFAQRA STRAGKLQVELAQLQYTQPRLTGKNRAMDRLAGGIGGRGPGETKLETDRRKVRERIARIKQDLKALRTQRGFTRGRRAKA RVPVASLVGYTNAGKSTLLNTLTNADVLAEDKLFATLDTTTRRLRFPQERELIVTDTVGFIRSLPKELKEAFRATLEELE AADLLLHVADAGHPELEMQLRAVEEILDELELQDIPRLLVLNKWETLDDETRLALAALYPAAIRVSARTRLGLDDLTAEI IRRIDWERML
Sequences:
>Translated_490_residues MLDRQGRVSLVIVGDTGSIYIPELPRARTGAGRLRGLRLLHTHLTDSLLSQEDLMDMLFLRLDDVGVLTVDQHGGPASFQ HAHLLPGGTQPYMVHDPQGWDRVITDFTAQAQALEEELSRITADARETGSESGRAVLVSVSPDPRSVQESSLAELAELAD TAGLTVAGTMVQRVRQLNYKFILGKGKLAELEVLALTANAGVILFDGELSPAQLHNLADITERKVIDRTQLILDIFAQRA STRAGKLQVELAQLQYTQPRLTGKNRAMDRLAGGIGGRGPGETKLETDRRKVRERIARIKQDLKALRTQRGFTRGRRAKA RVPVASLVGYTNAGKSTLLNTLTNADVLAEDKLFATLDTTTRRLRFPQERELIVTDTVGFIRSLPKELKEAFRATLEELE AADLLLHVADAGHPELEMQLRAVEEILDELELQDIPRLLVLNKWETLDDETRLALAALYPAAIRVSARTRLGLDDLTAEI IRRIDWERML >Mature_490_residues MLDRQGRVSLVIVGDTGSIYIPELPRARTGAGRLRGLRLLHTHLTDSLLSQEDLMDMLFLRLDDVGVLTVDQHGGPASFQ HAHLLPGGTQPYMVHDPQGWDRVITDFTAQAQALEEELSRITADARETGSESGRAVLVSVSPDPRSVQESSLAELAELAD TAGLTVAGTMVQRVRQLNYKFILGKGKLAELEVLALTANAGVILFDGELSPAQLHNLADITERKVIDRTQLILDIFAQRA STRAGKLQVELAQLQYTQPRLTGKNRAMDRLAGGIGGRGPGETKLETDRRKVRERIARIKQDLKALRTQRGFTRGRRAKA RVPVASLVGYTNAGKSTLLNTLTNADVLAEDKLFATLDTTTRRLRFPQERELIVTDTVGFIRSLPKELKEAFRATLEELE AADLLLHVADAGHPELEMQLRAVEEILDELELQDIPRLLVLNKWETLDDETRLALAALYPAAIRVSARTRLGLDDLTAEI IRRIDWERML
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=232, Percent_Identity=37.5, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI310133116, Length=224, Percent_Identity=37.5, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI310124269, Length=207, Percent_Identity=38.6473429951691, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310124267, Length=207, Percent_Identity=38.6473429951691, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310124171, Length=207, Percent_Identity=38.6473429951691, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310124169, Length=207, Percent_Identity=38.6473429951691, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790615, Length=338, Percent_Identity=46.4497041420118, Blast_Score=260, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17561038, Length=275, Percent_Identity=29.8181818181818, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24650079, Length=353, Percent_Identity=31.728045325779, Blast_Score=117, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 54346; Mature: 54346
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRQGRVSLVIVGDTGSIYIPELPRARTGAGRLRGLRLLHTHLTDSLLSQEDLMDMLFL CCCCCCCEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLDDVGVLTVDQHGGPASFQHAHLLPGGTQPYMVHDPQGWDRVITDFTAQAQALEEELSR HHCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH ITADARETGSESGRAVLVSVSPDPRSVQESSLAELAELADTAGLTVAGTMVQRVRQLNYK HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE FILGKGKLAELEVLALTANAGVILFDGELSPAQLHNLADITERKVIDRTQLILDIFAQRA EEECCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STRAGKLQVELAQLQYTQPRLTGKNRAMDRLAGGIGGRGPGETKLETDRRKVRERIARIK CCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH QDLKALRTQRGFTRGRRAKARVPVASLVGYTNAGKSTLLNTLTNADVLAEDKLFATLDTT HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCEECCCEEEEEHHH TRRLRFPQERELIVTDTVGFIRSLPKELKEAFRATLEELEAADLLLHVADAGHPELEMQL HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RAVEEILDELELQDIPRLLVLNKWETLDDETRLALAALYPAAIRVSARTRLGLDDLTAEI HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHH IRRIDWERML HHHHHHHHCC >Mature Secondary Structure MLDRQGRVSLVIVGDTGSIYIPELPRARTGAGRLRGLRLLHTHLTDSLLSQEDLMDMLFL CCCCCCCEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLDDVGVLTVDQHGGPASFQHAHLLPGGTQPYMVHDPQGWDRVITDFTAQAQALEEELSR HHCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH ITADARETGSESGRAVLVSVSPDPRSVQESSLAELAELADTAGLTVAGTMVQRVRQLNYK HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE FILGKGKLAELEVLALTANAGVILFDGELSPAQLHNLADITERKVIDRTQLILDIFAQRA EEECCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STRAGKLQVELAQLQYTQPRLTGKNRAMDRLAGGIGGRGPGETKLETDRRKVRERIARIK CCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH QDLKALRTQRGFTRGRRAKARVPVASLVGYTNAGKSTLLNTLTNADVLAEDKLFATLDTT HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCEECCCEEEEEHHH TRRLRFPQERELIVTDTVGFIRSLPKELKEAFRATLEELEAADLLLHVADAGHPELEMQL HHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH RAVEEILDELELQDIPRLLVLNKWETLDDETRLALAALYPAAIRVSARTRLGLDDLTAEI HHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHH IRRIDWERML HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]