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The map label for this gene is flgB

Identifier: 78355403

GI number: 78355403

Start: 345232

End: 345699

Strand: Reverse

Name: flgB

Synonym: Dde_0356

Alternate gene names: 78355403

Gene position: 345699-345232 (Counterclockwise)

Preceding gene: 78355405

Following gene: 78355402

Centisome position: 9.27

GC content: 55.34

Gene sequence:

>468_bases
TTGTGCAGATGGCAGCGTCCGGCTTTCCGGCGCATGGCTTCATCGGAGGCAGACACCATGAAAACACTTTTCGGACAGCA
CATGGAAGTGACCGCCAAGGTCATGGACATGCAGCTCAAGCGCCAGAACGTCATCATGAGCAATATGGCGAACGTGCGCA
CGCCCGGGTACAAGGCCCGCGAACTGGACTTTGAAAAAGACCTGCAGGCAGCACTTTCGCTGGGTACGGAAGGCAAGATA
GCCCGTACCCATGAAAAGCACGTACCGGCGACCTTTGACCCCGAGACTTTCGGCCCGGAATGGACCAAGGCGTTCAGACC
GCGTGTCGTCCACGGCGAAGATCAGGTCGATCTGGACAAGGAAATGGCCAAGATGGCCAAGAACACCCTGCAGTACAACA
CGCTTTCCACCATCATCAAAGGCAACTTTCAGGGCCTTAAAGACGTCATCATGACAGGGCAGAAATAA

Upstream 100 bases:

>100_bases
ACCAGTGACCAAATATTGACACCATGGCCGCAAAACTGCGCAGAAATCATATTTAAAATATATTTTTCAAACAGTTAACA
ATCATGGAACACACCTTGCT

Downstream 100 bases:

>100_bases
TGGATTTCATGACAGCACTCGACATCGGCGCATCGGCACTCAGTGCGGAACGCACGAGCATGAACATAACCTCCATGAAC
CTGGCCAACGCAAAGACGAC

Product: flagellar basal body rod protein FlgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MCRWQRPAFRRMASSEADTMKTLFGQHMEVTAKVMDMQLKRQNVIMSNMANVRTPGYKARELDFEKDLQAALSLGTEGKI
ARTHEKHVPATFDPETFGPEWTKAFRPRVVHGEDQVDLDKEMAKMAKNTLQYNTLSTIIKGNFQGLKDVIMTGQK

Sequences:

>Translated_155_residues
MCRWQRPAFRRMASSEADTMKTLFGQHMEVTAKVMDMQLKRQNVIMSNMANVRTPGYKARELDFEKDLQAALSLGTEGKI
ARTHEKHVPATFDPETFGPEWTKAFRPRVVHGEDQVDLDKEMAKMAKNTLQYNTLSTIIKGNFQGLKDVIMTGQK
>Mature_155_residues
MCRWQRPAFRRMASSEADTMKTLFGQHMEVTAKVMDMQLKRQNVIMSNMANVRTPGYKARELDFEKDLQAALSLGTEGKI
ARTHEKHVPATFDPETFGPEWTKAFRPRVVHGEDQVDLDKEMAKMAKNTLQYNTLSTIIKGNFQGLKDVIMTGQK

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=126, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 17723; Mature: 17723

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRWQRPAFRRMASSEADTMKTLFGQHMEVTAKVMDMQLKRQNVIMSNMANVRTPGYKAR
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELDFEKDLQAALSLGTEGKIARTHEKHVPATFDPETFGPEWTKAFRPRVVHGEDQVDLDK
HCCHHHHHHHHHHCCCCCCEECCHHCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCHHH
EMAKMAKNTLQYNTLSTIIKGNFQGLKDVIMTGQK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MCRWQRPAFRRMASSEADTMKTLFGQHMEVTAKVMDMQLKRQNVIMSNMANVRTPGYKAR
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ELDFEKDLQAALSLGTEGKIARTHEKHVPATFDPETFGPEWTKAFRPRVVHGEDQVDLDK
HCCHHHHHHHHHHCCCCCCEECCHHCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCHHH
EMAKMAKNTLQYNTLSTIIKGNFQGLKDVIMTGQK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]