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The map label for this gene is flgC [H]

Identifier: 78355402

GI number: 78355402

Start: 344792

End: 345232

Strand: Reverse

Name: flgC [H]

Synonym: Dde_0355

Alternate gene names: 78355402

Gene position: 345232-344792 (Counterclockwise)

Preceding gene: 78355403

Following gene: 78355401

Centisome position: 9.25

GC content: 59.18

Gene sequence:

>441_bases
ATGGATTTCATGACAGCACTCGACATCGGCGCATCGGCACTCAGTGCGGAACGCACGAGCATGAACATAACCTCCATGAA
CCTGGCCAACGCAAAGACGACCAGAACCATAGGCGGCGGGCCATACCGCCGCAAGGCCGTTGTCATGGCTGCCACAGAGG
TGGACGACCCCTTCAGCAAGCATATGCAGAGCGCGCTTGACCGCGAACTGCGCGGGGTGCGCGTACAACACATCGTGCGC
GACAACCGCCCTTTCCGTCAGGTGTACGAACCCGGACACCCCGACGCCGATGCCAACGGCTACGTTAAATACCCGGACAT
CAACGTGGTGGAGGAAATGGCCAACCTGATGACCTCGCAGCGCGGGTATCAGGCCAGCGTGTCCACCATCGAGGCTGTCA
AAAGCATGTACACCAAGGCACTGGAAATAGGCCGTTCATAG

Upstream 100 bases:

>100_bases
CCAAGATGGCCAAGAACACCCTGCAGTACAACACGCTTTCCACCATCATCAAAGGCAACTTTCAGGGCCTTAAAGACGTC
ATCATGACAGGGCAGAAATA

Downstream 100 bases:

>100_bases
GCGGGGTAACGCATCATGACCATTCAGAGTGTCGGCCTGAAGGCCTACAGCAACGCGCTGTCAAACTTTACCAAGGCAGA
ACGCAGCATCCAGTCGGGCA

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDFMTALDIGASALSAERTSMNITSMNLANAKTTRTIGGGPYRRKAVVMAATEVDDPFSKHMQSALDRELRGVRVQHIVR
DNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMTSQRGYQASVSTIEAVKSMYTKALEIGRS

Sequences:

>Translated_146_residues
MDFMTALDIGASALSAERTSMNITSMNLANAKTTRTIGGGPYRRKAVVMAATEVDDPFSKHMQSALDRELRGVRVQHIVR
DNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMTSQRGYQASVSTIEAVKSMYTKALEIGRS
>Mature_146_residues
MDFMTALDIGASALSAERTSMNITSMNLANAKTTRTIGGGPYRRKAVVMAATEVDDPFSKHMQSALDRELRGVRVQHIVR
DNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMTSQRGYQASVSTIEAVKSMYTKALEIGRS

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=145, Percent_Identity=39.3103448275862, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16159; Mature: 16159

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFMTALDIGASALSAERTSMNITSMNLANAKTTRTIGGGPYRRKAVVMAATEVDDPFSK
CCCHHHHHHCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHH
HMQSALDRELRGVRVQHIVRDNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMTSQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHC
RGYQASVSTIEAVKSMYTKALEIGRS
CCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFMTALDIGASALSAERTSMNITSMNLANAKTTRTIGGGPYRRKAVVMAATEVDDPFSK
CCCHHHHHHCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHEEEEEECCCCCHHHH
HMQSALDRELRGVRVQHIVRDNRPFRQVYEPGHPDADANGYVKYPDINVVEEMANLMTSQ
HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHC
RGYQASVSTIEAVKSMYTKALEIGRS
CCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]