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The map label for this gene is cstA [C]

Identifier: 78355274

GI number: 78355274

Start: 212050

End: 213519

Strand: Reverse

Name: cstA [C]

Synonym: Dde_0227

Alternate gene names: 78355274

Gene position: 213519-212050 (Counterclockwise)

Preceding gene: 78355275

Following gene: 78355272

Centisome position: 5.72

GC content: 59.32

Gene sequence:

>1470_bases
ATGCTGTACTTTTTTCTGGCTGTTGCAGCACTGCTGGTCGGCTACGCCGTATACAGCAAGGTAGTGGAACGCGCCTTCGG
CGCGGATGAATGCCGGGCCACACCGGCCTGCACCATGGAAGACGGTGTGGACTATGTGAAGATGGATCCCAAAAAAATCT
GGCTGATCCAGCTTCTGAACATTGCCGGTCTGGGTCCCATCTTCGGCCCCATTCTGGGTGCGCTGTACGGTCCCGCGGCC
CTGCTGTGGATTGTCATCGGATCTATTTTCGCGGGTGCTGTGCACGACTACTTCGCAGGCATGATGTCGGTGCGCTACAG
CGGCAAATCCATCCCCGACGCCGTCGGCTACAACCTTGGTTCTTTCGCCAAGCACTTCATGAACGTGTTCGCCGTCATTC
TGCTGCTGCTTGTGGGCGTCGTGTTTGTTCTCGGTCCGGCAAAGCTGCTGGCAGTCAAGCTGGGCTTCGGCCTTGAAGGC
GACGGCGCCGTGGCTACCGCCACCATGATCTGGACGGGCATCATTTTCTGTTACTACTTTATCGCCACCGTACTGCCCGT
GGATAAAATCATCGGCCGGTTGTACCCCCTGTTCGCCGTGGTGCTGCTTATCATGGCGTTCGGCCTGACCATCATGCTCA
TCGCCAAGGGATACGAATTCTATCCGCAGGGTCTCACGCTTGAAAACCTGCATCCCAAAAACCTGCCCATGTGGCCGCTG
ATGTTCATCACCATCGCCTGCGGTGCCATTTCCGGCTTCCATGCCACGCAGTCTCCGCTGATGGCCCGCTGCGTGCCCGA
TGAAAAATGCGGACGCCCCATATTCTACGGCGCCATGATCGGCGAAGGCATCATCGCCCTTATCTGGGCAACTCTGGGCA
TGAGCTTTTTCCACACCCCCGGAGAACTGCAGGCCGTGCTGGATAACGGCGGCCCCGCAGCCGTGGTGGATACTGTATCC
ATGACCCTTATGGGGCCCATAGGCGGCTTCCTTGCCATCATCGGCGTGGTGGTTCTGCCCATCACTTCCGGTGACACGGC
TTTCCGTTCCGCCCGTCTCATCATTGCCGACTTCATCAAGCTGCCTCAGAAGGCACCGGTCAAGCGTCTGTTCATTGCCG
TGCCGCTGTTCGCAGTCGGCTACGCCATCACGCTCACGCCGTTTGCAGTCATCTGGCGCTACTTCGGCTTTTCCAACCAG
CTGCTGGCCACCATCGTGCTGTGGGCGGGCGCCATGTATCTTGTCCGCCACGGCAAGGCACACTGGATGGCATCCATCCC
CGCCACATTCATGACGGCAGTATGCGCAACCTACCTTGCCTACGCCAAAATCGGCTTCGGCCTTTCCATGGATATCGCAC
AGGTTTTCGGCATTGCCGTGGCTGTGCTGTGCGCCGGTTTCTTCCTGGTGAAGATCCGCAGCGTGCCCGTGGAGCCCGAC
GCCGCCGACGGTCCCGGCCGCATCGGCTGA

Upstream 100 bases:

>100_bases
CGGGCACCGGACGGCTGGCCTGCCGCTGCAGCCCGTTTTCTGGCGGAGGAGGGATGCGCCCCCGCGCATCGAACCGGAGT
TTTGAAAAAGGAGTGGAGTC

Downstream 100 bases:

>100_bases
TCCGTCACAGCACTCAGAGCCCCCGCCGCAGCGGGGGCTTTTTTATGCGGCGCCGCATGCCGGTCCGACCACAGGCCCTG
CCGATCACCCCGCGCAATTC

Product: carbon starvation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MLYFFLAVAALLVGYAVYSKVVERAFGADECRATPACTMEDGVDYVKMDPKKIWLIQLLNIAGLGPIFGPILGALYGPAA
LLWIVIGSIFAGAVHDYFAGMMSVRYSGKSIPDAVGYNLGSFAKHFMNVFAVILLLLVGVVFVLGPAKLLAVKLGFGLEG
DGAVATATMIWTGIIFCYYFIATVLPVDKIIGRLYPLFAVVLLIMAFGLTIMLIAKGYEFYPQGLTLENLHPKNLPMWPL
MFITIACGAISGFHATQSPLMARCVPDEKCGRPIFYGAMIGEGIIALIWATLGMSFFHTPGELQAVLDNGGPAAVVDTVS
MTLMGPIGGFLAIIGVVVLPITSGDTAFRSARLIIADFIKLPQKAPVKRLFIAVPLFAVGYAITLTPFAVIWRYFGFSNQ
LLATIVLWAGAMYLVRHGKAHWMASIPATFMTAVCATYLAYAKIGFGLSMDIAQVFGIAVAVLCAGFFLVKIRSVPVEPD
AADGPGRIG

Sequences:

>Translated_489_residues
MLYFFLAVAALLVGYAVYSKVVERAFGADECRATPACTMEDGVDYVKMDPKKIWLIQLLNIAGLGPIFGPILGALYGPAA
LLWIVIGSIFAGAVHDYFAGMMSVRYSGKSIPDAVGYNLGSFAKHFMNVFAVILLLLVGVVFVLGPAKLLAVKLGFGLEG
DGAVATATMIWTGIIFCYYFIATVLPVDKIIGRLYPLFAVVLLIMAFGLTIMLIAKGYEFYPQGLTLENLHPKNLPMWPL
MFITIACGAISGFHATQSPLMARCVPDEKCGRPIFYGAMIGEGIIALIWATLGMSFFHTPGELQAVLDNGGPAAVVDTVS
MTLMGPIGGFLAIIGVVVLPITSGDTAFRSARLIIADFIKLPQKAPVKRLFIAVPLFAVGYAITLTPFAVIWRYFGFSNQ
LLATIVLWAGAMYLVRHGKAHWMASIPATFMTAVCATYLAYAKIGFGLSMDIAQVFGIAVAVLCAGFFLVKIRSVPVEPD
AADGPGRIG
>Mature_489_residues
MLYFFLAVAALLVGYAVYSKVVERAFGADECRATPACTMEDGVDYVKMDPKKIWLIQLLNIAGLGPIFGPILGALYGPAA
LLWIVIGSIFAGAVHDYFAGMMSVRYSGKSIPDAVGYNLGSFAKHFMNVFAVILLLLVGVVFVLGPAKLLAVKLGFGLEG
DGAVATATMIWTGIIFCYYFIATVLPVDKIIGRLYPLFAVVLLIMAFGLTIMLIAKGYEFYPQGLTLENLHPKNLPMWPL
MFITIACGAISGFHATQSPLMARCVPDEKCGRPIFYGAMIGEGIIALIWATLGMSFFHTPGELQAVLDNGGPAAVVDTVS
MTLMGPIGGFLAIIGVVVLPITSGDTAFRSARLIIADFIKLPQKAPVKRLFIAVPLFAVGYAITLTPFAVIWRYFGFSNQ
LLATIVLWAGAMYLVRHGKAHWMASIPATFMTAVCATYLAYAKIGFGLSMDIAQVFGIAVAVLCAGFFLVKIRSVPVEPD
AADGPGRIG

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=119, Percent_Identity=33.6134453781513, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082431, Length=117, Percent_Identity=34.1880341880342, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 52405; Mature: 52405

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFFLAVAALLVGYAVYSKVVERAFGADECRATPACTMEDGVDYVKMDPKKIWLIQLLN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHCCCCEEEECCHHHHHHHHHH
IAGLGPIFGPILGALYGPAALLWIVIGSIFAGAVHDYFAGMMSVRYSGKSIPDAVGYNLG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHH
SFAKHFMNVFAVILLLLVGVVFVLGPAKLLAVKLGFGLEGDGAVATATMIWTGIIFCYYF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IATVLPVDKIIGRLYPLFAVVLLIMAFGLTIMLIAKGYEFYPQGLTLENLHPKNLPMWPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHH
MFITIACGAISGFHATQSPLMARCVPDEKCGRPIFYGAMIGEGIIALIWATLGMSFFHTP
HHHHHHHHHHCCCCCCCCCHHHHCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC
GELQAVLDNGGPAAVVDTVSMTLMGPIGGFLAIIGVVVLPITSGDTAFRSARLIIADFIK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LPQKAPVKRLFIAVPLFAVGYAITLTPFAVIWRYFGFSNQLLATIVLWAGAMYLVRHGKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
HWMASIPATFMTAVCATYLAYAKIGFGLSMDIAQVFGIAVAVLCAGFFLVKIRSVPVEPD
HHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AADGPGRIG
CCCCCCCCC
>Mature Secondary Structure
MLYFFLAVAALLVGYAVYSKVVERAFGADECRATPACTMEDGVDYVKMDPKKIWLIQLLN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHCCCCEEEECCHHHHHHHHHH
IAGLGPIFGPILGALYGPAALLWIVIGSIFAGAVHDYFAGMMSVRYSGKSIPDAVGYNLG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHH
SFAKHFMNVFAVILLLLVGVVFVLGPAKLLAVKLGFGLEGDGAVATATMIWTGIIFCYYF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IATVLPVDKIIGRLYPLFAVVLLIMAFGLTIMLIAKGYEFYPQGLTLENLHPKNLPMWPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHH
MFITIACGAISGFHATQSPLMARCVPDEKCGRPIFYGAMIGEGIIALIWATLGMSFFHTP
HHHHHHHHHHCCCCCCCCCHHHHCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCC
GELQAVLDNGGPAAVVDTVSMTLMGPIGGFLAIIGVVVLPITSGDTAFRSARLIIADFIK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LPQKAPVKRLFIAVPLFAVGYAITLTPFAVIWRYFGFSNQLLATIVLWAGAMYLVRHGKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCH
HWMASIPATFMTAVCATYLAYAKIGFGLSMDIAQVFGIAVAVLCAGFFLVKIRSVPVEPD
HHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AADGPGRIG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]