| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355107
Identifier: 78355107
GI number: 78355107
Start: 51082
End: 51579
Strand: Reverse
Name: 78355107
Synonym: Dde_0060
Alternate gene names: NA
Gene position: 51579-51082 (Counterclockwise)
Preceding gene: 78355110
Following gene: 78355106
Centisome position: 1.38
GC content: 48.8
Gene sequence:
>498_bases ATGTCCACGGAATTCGGCAAGGCCCTTAACCAGATTGTCGAAGTCATGATGTTTGAAAACTGGCTTCGCTTTTATTTTAT CAACGAAGAAGAAGATTCCGCTCTGCTTATCCGTGTTCCGGAACAGGCGGAAGAGCATATCACTAAGGATTATGCTCATC TGGCCGGCATGCTGGAGCTTCTGAACAATAAAGAAATCACCTTTGAATCGTCGCGCAACGCCGTCTGCACCTTTGTGGCC ACCAGTCTGGAAGGCCGCACCATGCGCAATGATCTGGCGGCGCGAGTTTTTGACAGCTCCGTCTTCCAGCTGGAAATGCA GCTCTTTAACATCTGGGTGCAGTCGCACGAAGAGCAGCTGGACAAATCCTTCATGGAATTCAGCACATGGAAAAGCATGT TCGAGGAGTGGAAAAAGTCTGACAAAGTAAAAGACTATGTGGCTGAAATGAAAGACACCCTCGTGCGTTCAGCCAAGGAA ACCTGTACTGTGCAGTAG
Upstream 100 bases:
>100_bases TCTGCGGACTTTGTGAAATTTTGGACTTGACGCCGCCCTGCTGAGTGTCCATAGTCTGCACACGCGCAATCCGCGCCAGA TCAGGAATCGAGGAGTTCTC
Downstream 100 bases:
>100_bases CTTTCTGACGGTTTTTTGCGTCTTTCCGGCGGCACCCTGCGGGGTGCCGCCTTTTTTATTGCCGCAGTTACGCCTTCTGC ACATAGCCAAAGCCTGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSTEFGKALNQIVEVMMFENWLRFYFINEEEDSALLIRVPEQAEEHITKDYAHLAGMLELLNNKEITFESSRNAVCTFVA TSLEGRTMRNDLAARVFDSSVFQLEMQLFNIWVQSHEEQLDKSFMEFSTWKSMFEEWKKSDKVKDYVAEMKDTLVRSAKE TCTVQ
Sequences:
>Translated_165_residues MSTEFGKALNQIVEVMMFENWLRFYFINEEEDSALLIRVPEQAEEHITKDYAHLAGMLELLNNKEITFESSRNAVCTFVA TSLEGRTMRNDLAARVFDSSVFQLEMQLFNIWVQSHEEQLDKSFMEFSTWKSMFEEWKKSDKVKDYVAEMKDTLVRSAKE TCTVQ >Mature_164_residues STEFGKALNQIVEVMMFENWLRFYFINEEEDSALLIRVPEQAEEHITKDYAHLAGMLELLNNKEITFESSRNAVCTFVAT SLEGRTMRNDLAARVFDSSVFQLEMQLFNIWVQSHEEQLDKSFMEFSTWKSMFEEWKKSDKVKDYVAEMKDTLVRSAKET CTVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19408; Mature: 19277
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEFGKALNQIVEVMMFENWLRFYFINEEEDSALLIRVPEQAEEHITKDYAHLAGMLEL CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH LNNKEITFESSRNAVCTFVATSLEGRTMRNDLAARVFDSSVFQLEMQLFNIWVQSHEEQL HCCCCEEEECCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKSFMEFSTWKSMFEEWKKSDKVKDYVAEMKDTLVRSAKETCTVQ HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STEFGKALNQIVEVMMFENWLRFYFINEEEDSALLIRVPEQAEEHITKDYAHLAGMLEL CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH LNNKEITFESSRNAVCTFVATSLEGRTMRNDLAARVFDSSVFQLEMQLFNIWVQSHEEQL HCCCCEEEECCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKSFMEFSTWKSMFEEWKKSDKVKDYVAEMKDTLVRSAKETCTVQ HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA