| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355110
Identifier: 78355110
GI number: 78355110
Start: 53429
End: 54892
Strand: Reverse
Name: 78355110
Synonym: Dde_0063
Alternate gene names: NA
Gene position: 54892-53429 (Counterclockwise)
Preceding gene: 78355111
Following gene: 78355107
Centisome position: 1.47
GC content: 60.31
Gene sequence:
>1464_bases ATGAAGTGTATTGCCGCCGTCATCATCTGCCTGCTGCTGTCCGTCACGGGAACTGCGGCTGCCGCCCAATGTGTCAGCCG CACCGCTCCGGCGCTTGACTTCACCCTGCACTGCCTGGGCACAGACACTCCGGCGGCGGCAAACGCCACGGCTTCGGCAT CCGGCCCCACGCTGCTTATTGTCGGCGGCATACAGGGAGACGAACCCGGCGGTTTCAATGCCGCCTCGCTTGTGGCTTCG CATTACACCATAACCCGCGGCAGTGTCTGGGTGGTGCCCGACCTCAATTTTCCCAGCATCATCAAACGGTCACGCGGCAT ACATGGCGACATGAACCGCAAATTCGCCCGCCTGCCCCGACGCGATCCCGAATTTGACACCGTGGCGCGCATCAAATCCA TCATTCTGGACCCCAGAGTGGACGCCGTGCTCAATCTGCATGACGGCAGCGGTTTCTACCGGCCGCAGTGGGAAGACGCG CAACGCAATCCCAACCGGTGGGGCCAGTCCGTCATCATTGACCAGTCGGACATAAAGGCACAACGGTTCAGCAATCTGGA GCTGCTGGCCAGAAACGCCGTGGACCACGTCAACAGCGAACTGCTGGACACCGCCCACCGGTATTACCTGAAAAACACCC ATACCAGCATGGGCGACCGCGAAATGGAAAAGACCCTGACCTATTTCGCCATCCTGCACGGCAAACCGGCGTTCGGAATT GAAGCCAGCAAACAGTTTCCCACACATATCCGCGCCTATTACCATCTGCAGATTCTCGAATCGTTCATGCGCCAGATGGG CATACAGTTCCGGCGGCACTTTCCGCTGACCAAAGGCGGGGTATACGCCGCCATAGAACGCGACGTAGCCATGCGCCTGT ATGACGGCCGCATCACACTGCCGCTGGACGACATACGCCGCGCGGTCAACTATGTGCCCATGCGCAAAGACCGTCCGGTA ACCTTTTCGCCCCTGCGCCCGCTGGTCACGCTGCTGCCGCAGAGCGGGTCCTTTGACGTGTACTACGGCAACCGCAGACT CACCGCCATAAGACCGCAGTATTTTGATTTCGACGATACACTGCACAGCGTGACGCTGGACATAGACGGCCGCACCGTTG CCGCAAGTCCCGGCGACATCGTTTCGGTGAACAAGGTGTTTGCCGTGCGCCCGCTGGCAGGGTACCGGGTAAACATTATC GGCATGACCAGAGACGGCGTGGACGACGAGGCAGGGCTGTCCGTACGGCGGGAAGACTTTATGCCGGGCTTTTCGCTGGA CACCGGAGAATCGCTGTACAGGGTTGAAGTATACCGGCTGCGGCAGGGCCGCGATGATGCCTTTGCCGGCATGCTCATAA TGAACTTCGGCGGACCGCAGTCACGCCAGCAGCTGGCCATGGAAGCACCCGACGCCATGAACGCCGCCGGAACGGAAAAA AAAGCCGATCAGGCAGGCCGCTGA
Upstream 100 bases:
>100_bases TCTTCAAACAGCTTGAAAAACGCGGCTACATCACGCTGCGCTATCCGCAGGACAACCTGCTGGGCGTGCGTTTCGAGCCG TGGCATGTAAAGGTACCTTC
Downstream 100 bases:
>100_bases CGGCCATGCCGTCAGCACGGCGGCATCATGTACCGGACAGACAAAAACGGCGCCGGATTCCACAGGAATCCGGCGCCGTT CAGTATACGGGCAGGGCAGA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Succinylglutamate Desuccinylase/Aspartoacylase; Purine Nucleoside Phosphorylase; Tat Pathway Signal Sequence Domain Protein; Secreted Protein
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLIVGGIQGDEPGGFNAASLVAS HYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPRRDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDA QRNPNRWGQSVIIDQSDIKAQRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITLPLDDIRRAVNYVPMRKDRPV TFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDTLHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNII GMTRDGVDDEAGLSVRREDFMPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK KADQAGR
Sequences:
>Translated_487_residues MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLIVGGIQGDEPGGFNAASLVAS HYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPRRDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDA QRNPNRWGQSVIIDQSDIKAQRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITLPLDDIRRAVNYVPMRKDRPV TFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDTLHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNII GMTRDGVDDEAGLSVRREDFMPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK KADQAGR >Mature_487_residues MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLIVGGIQGDEPGGFNAASLVAS HYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPRRDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDA QRNPNRWGQSVIIDQSDIKAQRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITLPLDDIRRAVNYVPMRKDRPV TFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDTLHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNII GMTRDGVDDEAGLSVRREDFMPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK KADQAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54081; Mature: 54081
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLI CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE VGGIQGDEPGGFNAASLVASHYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPR EECCCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHCCC RDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDAQRNPNRWGQSVIIDQSDIKA CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHH QRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCC EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITL CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEEHHCEEEEEECCEEEE PLDDIRRAVNYVPMRKDRPVTFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDT CHHHHHHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCC LHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNIIGMTRDGVDDEAGLSVRREDF EEEEEEEECCEEEECCCCCEEEECCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEHHHC MPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK CCCCCCCCCCCEEEEEEEEHHCCCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC KADQAGR CHHCCCC >Mature Secondary Structure MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLI CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE VGGIQGDEPGGFNAASLVASHYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPR EECCCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHCCC RDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDAQRNPNRWGQSVIIDQSDIKA CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHH QRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCC EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITL CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEEHHCEEEEEECCEEEE PLDDIRRAVNYVPMRKDRPVTFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDT CHHHHHHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCC LHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNIIGMTRDGVDDEAGLSVRREDF EEEEEEEECCEEEECCCCCEEEECCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEHHHC MPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK CCCCCCCCCCCEEEEEEEEHHCCCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC KADQAGR CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA