Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355110

Identifier: 78355110

GI number: 78355110

Start: 53429

End: 54892

Strand: Reverse

Name: 78355110

Synonym: Dde_0063

Alternate gene names: NA

Gene position: 54892-53429 (Counterclockwise)

Preceding gene: 78355111

Following gene: 78355107

Centisome position: 1.47

GC content: 60.31

Gene sequence:

>1464_bases
ATGAAGTGTATTGCCGCCGTCATCATCTGCCTGCTGCTGTCCGTCACGGGAACTGCGGCTGCCGCCCAATGTGTCAGCCG
CACCGCTCCGGCGCTTGACTTCACCCTGCACTGCCTGGGCACAGACACTCCGGCGGCGGCAAACGCCACGGCTTCGGCAT
CCGGCCCCACGCTGCTTATTGTCGGCGGCATACAGGGAGACGAACCCGGCGGTTTCAATGCCGCCTCGCTTGTGGCTTCG
CATTACACCATAACCCGCGGCAGTGTCTGGGTGGTGCCCGACCTCAATTTTCCCAGCATCATCAAACGGTCACGCGGCAT
ACATGGCGACATGAACCGCAAATTCGCCCGCCTGCCCCGACGCGATCCCGAATTTGACACCGTGGCGCGCATCAAATCCA
TCATTCTGGACCCCAGAGTGGACGCCGTGCTCAATCTGCATGACGGCAGCGGTTTCTACCGGCCGCAGTGGGAAGACGCG
CAACGCAATCCCAACCGGTGGGGCCAGTCCGTCATCATTGACCAGTCGGACATAAAGGCACAACGGTTCAGCAATCTGGA
GCTGCTGGCCAGAAACGCCGTGGACCACGTCAACAGCGAACTGCTGGACACCGCCCACCGGTATTACCTGAAAAACACCC
ATACCAGCATGGGCGACCGCGAAATGGAAAAGACCCTGACCTATTTCGCCATCCTGCACGGCAAACCGGCGTTCGGAATT
GAAGCCAGCAAACAGTTTCCCACACATATCCGCGCCTATTACCATCTGCAGATTCTCGAATCGTTCATGCGCCAGATGGG
CATACAGTTCCGGCGGCACTTTCCGCTGACCAAAGGCGGGGTATACGCCGCCATAGAACGCGACGTAGCCATGCGCCTGT
ATGACGGCCGCATCACACTGCCGCTGGACGACATACGCCGCGCGGTCAACTATGTGCCCATGCGCAAAGACCGTCCGGTA
ACCTTTTCGCCCCTGCGCCCGCTGGTCACGCTGCTGCCGCAGAGCGGGTCCTTTGACGTGTACTACGGCAACCGCAGACT
CACCGCCATAAGACCGCAGTATTTTGATTTCGACGATACACTGCACAGCGTGACGCTGGACATAGACGGCCGCACCGTTG
CCGCAAGTCCCGGCGACATCGTTTCGGTGAACAAGGTGTTTGCCGTGCGCCCGCTGGCAGGGTACCGGGTAAACATTATC
GGCATGACCAGAGACGGCGTGGACGACGAGGCAGGGCTGTCCGTACGGCGGGAAGACTTTATGCCGGGCTTTTCGCTGGA
CACCGGAGAATCGCTGTACAGGGTTGAAGTATACCGGCTGCGGCAGGGCCGCGATGATGCCTTTGCCGGCATGCTCATAA
TGAACTTCGGCGGACCGCAGTCACGCCAGCAGCTGGCCATGGAAGCACCCGACGCCATGAACGCCGCCGGAACGGAAAAA
AAAGCCGATCAGGCAGGCCGCTGA

Upstream 100 bases:

>100_bases
TCTTCAAACAGCTTGAAAAACGCGGCTACATCACGCTGCGCTATCCGCAGGACAACCTGCTGGGCGTGCGTTTCGAGCCG
TGGCATGTAAAGGTACCTTC

Downstream 100 bases:

>100_bases
CGGCCATGCCGTCAGCACGGCGGCATCATGTACCGGACAGACAAAAACGGCGCCGGATTCCACAGGAATCCGGCGCCGTT
CAGTATACGGGCAGGGCAGA

Product: putative lipoprotein

Products: NA

Alternate protein names: Lipoprotein; Succinylglutamate Desuccinylase/Aspartoacylase; Purine Nucleoside Phosphorylase; Tat Pathway Signal Sequence Domain Protein; Secreted Protein

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLIVGGIQGDEPGGFNAASLVAS
HYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPRRDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDA
QRNPNRWGQSVIIDQSDIKAQRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI
EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITLPLDDIRRAVNYVPMRKDRPV
TFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDTLHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNII
GMTRDGVDDEAGLSVRREDFMPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK
KADQAGR

Sequences:

>Translated_487_residues
MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLIVGGIQGDEPGGFNAASLVAS
HYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPRRDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDA
QRNPNRWGQSVIIDQSDIKAQRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI
EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITLPLDDIRRAVNYVPMRKDRPV
TFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDTLHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNII
GMTRDGVDDEAGLSVRREDFMPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK
KADQAGR
>Mature_487_residues
MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLIVGGIQGDEPGGFNAASLVAS
HYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPRRDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDA
QRNPNRWGQSVIIDQSDIKAQRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI
EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITLPLDDIRRAVNYVPMRKDRPV
TFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDTLHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNII
GMTRDGVDDEAGLSVRREDFMPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK
KADQAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54081; Mature: 54081

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLI
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE
VGGIQGDEPGGFNAASLVASHYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPR
EECCCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHCCC
RDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDAQRNPNRWGQSVIIDQSDIKA
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
QRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCC
EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITL
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEEHHCEEEEEECCEEEE
PLDDIRRAVNYVPMRKDRPVTFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDT
CHHHHHHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCC
LHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNIIGMTRDGVDDEAGLSVRREDF
EEEEEEEECCEEEECCCCCEEEECCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEHHHC
MPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK
CCCCCCCCCCCEEEEEEEEHHCCCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC
KADQAGR
CHHCCCC
>Mature Secondary Structure
MKCIAAVIICLLLSVTGTAAAAQCVSRTAPALDFTLHCLGTDTPAAANATASASGPTLLI
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEE
VGGIQGDEPGGFNAASLVASHYTITRGSVWVVPDLNFPSIIKRSRGIHGDMNRKFARLPR
EECCCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHCCC
RDPEFDTVARIKSIILDPRVDAVLNLHDGSGFYRPQWEDAQRNPNRWGQSVIIDQSDIKA
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHH
QRFSNLELLARNAVDHVNSELLDTAHRYYLKNTHTSMGDREMEKTLTYFAILHGKPAFGI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCC
EASKQFPTHIRAYYHLQILESFMRQMGIQFRRHFPLTKGGVYAAIERDVAMRLYDGRITL
CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEEHHCEEEEEECCEEEE
PLDDIRRAVNYVPMRKDRPVTFSPLRPLVTLLPQSGSFDVYYGNRRLTAIRPQYFDFDDT
CHHHHHHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCEEEEECCEEEEEECCCCCCCCCC
LHSVTLDIDGRTVAASPGDIVSVNKVFAVRPLAGYRVNIIGMTRDGVDDEAGLSVRREDF
EEEEEEEECCEEEECCCCCEEEECCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEHHHC
MPGFSLDTGESLYRVEVYRLRQGRDDAFAGMLIMNFGGPQSRQQLAMEAPDAMNAAGTEK
CCCCCCCCCCCEEEEEEEEHHCCCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC
KADQAGR
CHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA