| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355090
Identifier: 78355090
GI number: 78355090
Start: 34764
End: 35009
Strand: Direct
Name: 78355090
Synonym: Dde_0043
Alternate gene names: NA
Gene position: 34764-35009 (Clockwise)
Preceding gene: 78355089
Following gene: 78355091
Centisome position: 0.93
GC content: 55.69
Gene sequence:
>246_bases ATGGCACGGGTTACTTTTCTGGATGAACGGTGCAAGGGGTGCCTGCTGTGCACCACTGTCTGCCCCAAGGAAATCATCCG TCAGTCTTCCCGCTTTAACCGTAAAGGGTACAAAGTGGCCGAAGTGACTGAAGAGGACATGGAACAGTGTACGGGGTGCG CTTCGTGCGCGCTTATCTGCCCCGACTTAGCGATACGGGTATACCGGCCCGAAAAGCCCGCCAAAGGCGAAAAGGCAAAG GAGTAG
Upstream 100 bases:
>100_bases GCGGTATACCCACGGCACTTAGAATTACCAAAAAAACTCATGACACAGTGAGCTTTTCTTTTCTGAAAAAAGCTTGCGGA AAAAACAGAGGGTAGTGCGA
Downstream 100 bases:
>100_bases GCGCATGTCGGCAAAGCCCTCAAGAATTTTCATCAAAGGGAACGAGGCCATAGCTCGCGGAGCGCTGGCTGCCGGGTGCA CCTGTTACTTCGGGTATCCC
Product: 2-oxoglutarate ferredoxin oxidoreductase subunit delta
Products: NA
Alternate protein names: Ferredoxin; 2-Oxoglutarate Ferredoxin Oxidoreductase Subunit Delta; 2-OxoacidAcceptor Oxidoreductase Delta Subunit; Ketoisovalerate Oxidoreductase Subunit VorC; 2-Oxoacid Oxidoreductase Subunit Delta; Keto/Oxoacid Ferredoxin Oxidoreductase Subunit; 2-OxoacidFerredoxin Oxidoreductase Ferredoxin Subunit; 3-Methyl-2-Oxobutanoate Dehydrogenase Delta Subunit
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MARVTFLDERCKGCLLCTTVCPKEIIRQSSRFNRKGYKVAEVTEEDMEQCTGCASCALICPDLAIRVYRPEKPAKGEKAK E
Sequences:
>Translated_81_residues MARVTFLDERCKGCLLCTTVCPKEIIRQSSRFNRKGYKVAEVTEEDMEQCTGCASCALICPDLAIRVYRPEKPAKGEKAK E >Mature_80_residues ARVTFLDERCKGCLLCTTVCPKEIIRQSSRFNRKGYKVAEVTEEDMEQCTGCASCALICPDLAIRVYRPEKPAKGEKAKE
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9118; Mature: 8987
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 10.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVTFLDERCKGCLLCTTVCPKEIIRQSSRFNRKGYKVAEVTEEDMEQCTGCASCALIC CCCCCCHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCHHHHHHHC PDLAIRVYRPEKPAKGEKAKE CCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure ARVTFLDERCKGCLLCTTVCPKEIIRQSSRFNRKGYKVAEVTEEDMEQCTGCASCALIC CCCCCHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHCHHHHHHHC PDLAIRVYRPEKPAKGEKAKE CCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA