| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is tal [H]
Identifier: 161485610
GI number: 161485610
Start: 1095665
End: 1096312
Strand: Reverse
Name: tal [H]
Synonym: Dde_1070
Alternate gene names: 161485610
Gene position: 1096312-1095665 (Counterclockwise)
Preceding gene: 78356121
Following gene: 78356114
Centisome position: 29.39
GC content: 56.02
Gene sequence:
>648_bases ATGGAATTTTTTCTCGATACCGCCGATCTGGACGAAATACGTCTGGCCGGAAAGCAGGGACTTATTGACGGAGTAACCAC CAACCCCACTCTGCTTTCACGGCAGGGCGGCGACTGGAAAAAACGCATGCAGCAGATCTGCGACGAGGTCGACGGCCCTG TCAGCCTGGAGGTAATCAGTCCGGATGCTGAAGGCATGCTGCGCGAAGCGGAAGAACTGGTGCGTTACGGCGATAATGTG GTCATCAAAGTGCCCATGACCGCAGAAGGCCTTATCGCCACCCGCACTCTGACCGGCAAAGGCATAAAAACCAATGTGAC GCTGGTTTTTTCGGCCATGCAGGCACTTCTGGCCGCCAAAGCCGGAGCAACCTATGTCAGCCCTTTTCTGGGCAGGCTGG ACGGCATAGGGCATGAAGGTATGGAGATTGTCAGCCAGATACGCACCATTTTTGACAACTACGGCTACGAAACAAAAATA CTGGCCGCCAGCATACGCCACGCCCAGCACGTGCTGGACAGCGCGCTGGTGGGGGCGGATGTGGTCACAGTGCCCTACTC GGTGCTCAGACAGCTTATGCATCACCCGCTCACAGATTCCGGCCTTGATGCATTTCTTGCCGACTGGAACAAGCTTACGC AGTCGTAG
Upstream 100 bases:
>100_bases TGCAGACATACGGGGCGCGGCGTGCTACGCTGGCAGTAACATAAGACACAACAGCTGCCCCTTTCACCATGCGGTGCGCA GCGTATCCAAGGAGACGTAT
Downstream 100 bases:
>100_bases TCTGACAGTGCGGCATTAAAAAAGCCCCGCACGGCAACATACGCCGTGCGGGGGGAGACATACGGCACTTGCGGACATCA GGCCCCGAGCACCACAACGT
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MEFFLDTADLDEIRLAGKQGLIDGVTTNPTLLSRQGGDWKKRMQQICDEVDGPVSLEVISPDAEGMLREAEELVRYGDNV VIKVPMTAEGLIATRTLTGKGIKTNVTLVFSAMQALLAAKAGATYVSPFLGRLDGIGHEGMEIVSQIRTIFDNYGYETKI LAASIRHAQHVLDSALVGADVVTVPYSVLRQLMHHPLTDSGLDAFLADWNKLTQS
Sequences:
>Translated_215_residues MEFFLDTADLDEIRLAGKQGLIDGVTTNPTLLSRQGGDWKKRMQQICDEVDGPVSLEVISPDAEGMLREAEELVRYGDNV VIKVPMTAEGLIATRTLTGKGIKTNVTLVFSAMQALLAAKAGATYVSPFLGRLDGIGHEGMEIVSQIRTIFDNYGYETKI LAASIRHAQHVLDSALVGADVVTVPYSVLRQLMHHPLTDSGLDAFLADWNKLTQS >Mature_215_residues MEFFLDTADLDEIRLAGKQGLIDGVTTNPTLLSRQGGDWKKRMQQICDEVDGPVSLEVISPDAEGMLREAEELVRYGDNV VIKVPMTAEGLIATRTLTGKGIKTNVTLVFSAMQALLAAKAGATYVSPFLGRLDGIGHEGMEIVSQIRTIFDNYGYETKI LAASIRHAQHVLDSALVGADVVTVPYSVLRQLMHHPLTDSGLDAFLADWNKLTQS
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=174, Percent_Identity=31.0344827586207, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI87081788, Length=212, Percent_Identity=33.9622641509434, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1790382, Length=214, Percent_Identity=37.8504672897196, Blast_Score=130, Evalue=8e-32, Organism=Escherichia coli, GI1786189, Length=242, Percent_Identity=29.3388429752066, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788807, Length=242, Percent_Identity=30.9917355371901, Blast_Score=79, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25153750, Length=164, Percent_Identity=31.0975609756098, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321480, Length=171, Percent_Identity=35.672514619883, Blast_Score=78, Evalue=8e-16, Organism=Drosophila melanogaster, GI45549185, Length=175, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 23401; Mature: 23401
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFFLDTADLDEIRLAGKQGLIDGVTTNPTLLSRQGGDWKKRMQQICDEVDGPVSLEVIS CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEC PDAEGMLREAEELVRYGDNVVIKVPMTAEGLIATRTLTGKGIKTNVTLVFSAMQALLAAK CCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH AGATYVSPFLGRLDGIGHEGMEIVSQIRTIFDNYGYETKILAASIRHAQHVLDSALVGAD CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH VVTVPYSVLRQLMHHPLTDSGLDAFLADWNKLTQS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MEFFLDTADLDEIRLAGKQGLIDGVTTNPTLLSRQGGDWKKRMQQICDEVDGPVSLEVIS CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEC PDAEGMLREAEELVRYGDNVVIKVPMTAEGLIATRTLTGKGIKTNVTLVFSAMQALLAAK CCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH AGATYVSPFLGRLDGIGHEGMEIVSQIRTIFDNYGYETKILAASIRHAQHVLDSALVGAD CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH VVTVPYSVLRQLMHHPLTDSGLDAFLADWNKLTQS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA