| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is dnaJ [H]
Identifier: 78224733
GI number: 78224733
Start: 3984971
End: 3985867
Strand: Reverse
Name: dnaJ [H]
Synonym: Gmet_3550
Alternate gene names: 78224733
Gene position: 3985867-3984971 (Counterclockwise)
Preceding gene: 78224736
Following gene: 78224729
Centisome position: 99.71
GC content: 63.1
Gene sequence:
>897_bases ATGGCGCAAACGGATTACTACGAGGTACTCGGCCTGAAGAAAGGGGCCACTGAAGCTGAGATCAAGAAAGCTTACCGGAA GCTGGCCGTCAAGTACCATCCCGACAAAAATCCCGGCGACAAGGGGGCCGAGGACAAATTCAAGGAGATCAACGAGGCCT ATGCGGTCCTCTCCGATCCCCAGAAGCGGGCCCAGTACGACCAGTTCGGCTCCAGCGGCTTCCACCAGCGCTACAGCCAG GAGGACATCTTCCGCGGGTTTGACGTGGGGGACATCTTCAAGGACATGGGGTTCGGCACCGACGACATCTTCTCCCGCAT CTTCGGCGGCGCCGGCGGTTTCCGCCAGGGTGGGTTCGGCTTCGGTGGCGGTCGCCGGCGGGGCGAGGACTTCACCATGG AGGTTCCCGTTACGTTCCGGGAATCGTATGACGGCGGAGAAAAGCGAGTGGCCTTCATGCGAGACGGGAAGCGGGAGGAG CTCGCCGTCAAGATACCGGCCGGGGTGGAGGACGGCGCGCGGCTTCGGGTAGCGGGGAAGGGGGGCTTTGGCCATGGCGG CGGACCAACCGGCGACCTCTACCTGATCATCAAGGTGGGAACCGATCCCCATTTCACTCGGGAGGGTGATGACATCGTGG TGGAGCGGAAGATCCGCTTTACCGACGCCCTCCTCGGTGCCTCCCTCGACGTGCCAACCTTGGAGGGTACCAAGCGGATC AAGATACCCGCCGGCATCCAGCCGGGGACCAAGATCCGCCTCAAGGGGCTCGGCTTCCCCCGCATGGGGAAGGCGGGAAA GGGAGATCTTTTCGTGCGGATTGGGGTGTCAGTGCCCGAGAGCCTTACCCCGGAGCAGAAGACCCTGGTGGAGGAGTTGC GGGGCAAGGGGCTGTAA
Upstream 100 bases:
>100_bases GCTGTCAAGAAAGTAAACATGGAGCCTTCTCCAGCTGAACCGTTGACAGGGTACTCCGGAGCGCTTACATTCTTTCAAGA CCTACGGAAAGGATTTTCAG
Downstream 100 bases:
>100_bases AGGCCGGGACCGGGGACCAGGGATCGGTAAAAGCGAAGAAAAACGTCAAGAGCATCCGAACCAAAAGTCGGCGAGAAGCG GGTGGAGGTTGGTTTACGGT
Product: heat shock protein DnaJ-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MAQTDYYEVLGLKKGATEAEIKKAYRKLAVKYHPDKNPGDKGAEDKFKEINEAYAVLSDPQKRAQYDQFGSSGFHQRYSQ EDIFRGFDVGDIFKDMGFGTDDIFSRIFGGAGGFRQGGFGFGGGRRRGEDFTMEVPVTFRESYDGGEKRVAFMRDGKREE LAVKIPAGVEDGARLRVAGKGGFGHGGGPTGDLYLIIKVGTDPHFTREGDDIVVERKIRFTDALLGASLDVPTLEGTKRI KIPAGIQPGTKIRLKGLGFPRMGKAGKGDLFVRIGVSVPESLTPEQKTLVEELRGKGL
Sequences:
>Translated_298_residues MAQTDYYEVLGLKKGATEAEIKKAYRKLAVKYHPDKNPGDKGAEDKFKEINEAYAVLSDPQKRAQYDQFGSSGFHQRYSQ EDIFRGFDVGDIFKDMGFGTDDIFSRIFGGAGGFRQGGFGFGGGRRRGEDFTMEVPVTFRESYDGGEKRVAFMRDGKREE LAVKIPAGVEDGARLRVAGKGGFGHGGGPTGDLYLIIKVGTDPHFTREGDDIVVERKIRFTDALLGASLDVPTLEGTKRI KIPAGIQPGTKIRLKGLGFPRMGKAGKGDLFVRIGVSVPESLTPEQKTLVEELRGKGL >Mature_297_residues AQTDYYEVLGLKKGATEAEIKKAYRKLAVKYHPDKNPGDKGAEDKFKEINEAYAVLSDPQKRAQYDQFGSSGFHQRYSQE DIFRGFDVGDIFKDMGFGTDDIFSRIFGGAGGFRQGGFGFGGGRRRGEDFTMEVPVTFRESYDGGEKRVAFMRDGKREEL AVKIPAGVEDGARLRVAGKGGFGHGGGPTGDLYLIIKVGTDPHFTREGDDIVVERKIRFTDALLGASLDVPTLEGTKRIK IPAGIQPGTKIRLKGLGFPRMGKAGKGDLFVRIGVSVPESLTPEQKTLVEELRGKGL
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI201862587, Length=347, Percent_Identity=34.0057636887608, Blast_Score=148, Evalue=7e-36, Organism=Homo sapiens, GI201862518, Length=347, Percent_Identity=34.0057636887608, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI56549115, Length=347, Percent_Identity=34.0057636887608, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI6631085, Length=332, Percent_Identity=34.6385542168675, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI5453690, Length=336, Percent_Identity=31.547619047619, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI205360840, Length=349, Percent_Identity=31.2320916905444, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI205360838, Length=349, Percent_Identity=31.2320916905444, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI7706495, Length=328, Percent_Identity=32.3170731707317, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI39204547, Length=316, Percent_Identity=30.0632911392405, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4504511, Length=155, Percent_Identity=36.1290322580645, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI194328760, Length=155, Percent_Identity=39.3548387096774, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI194328758, Length=155, Percent_Identity=39.3548387096774, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI194306642, Length=127, Percent_Identity=45.6692913385827, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI194306640, Length=127, Percent_Identity=45.6692913385827, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI29126218, Length=94, Percent_Identity=48.936170212766, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI45504382, Length=94, Percent_Identity=48.936170212766, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI17388799, Length=113, Percent_Identity=47.787610619469, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI23503241, Length=113, Percent_Identity=45.1327433628319, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI9558755, Length=105, Percent_Identity=49.5238095238095, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4885495, Length=113, Percent_Identity=47.787610619469, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI72534740, Length=125, Percent_Identity=46.4, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI5031741, Length=76, Percent_Identity=56.578947368421, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI21553335, Length=72, Percent_Identity=58.3333333333333, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI47777312, Length=113, Percent_Identity=46.0176991150442, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI56687498, Length=69, Percent_Identity=56.5217391304348, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI22749377, Length=109, Percent_Identity=43.1192660550459, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI88501736, Length=150, Percent_Identity=38, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI27151736, Length=149, Percent_Identity=36.9127516778523, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI68077168, Length=116, Percent_Identity=43.1034482758621, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI68077166, Length=116, Percent_Identity=43.1034482758621, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI27735107, Length=90, Percent_Identity=46.6666666666667, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI24308127, Length=95, Percent_Identity=41.0526315789474, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI217035105, Length=73, Percent_Identity=47.945205479452, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI21361912, Length=72, Percent_Identity=41.6666666666667, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI8922563, Length=69, Percent_Identity=42.0289855072464, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI6005872, Length=65, Percent_Identity=52.3076923076923, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787235, Length=306, Percent_Identity=35.9477124183007, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1786197, Length=278, Percent_Identity=37.410071942446, Blast_Score=128, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17534355, Length=329, Percent_Identity=35.5623100303951, Blast_Score=151, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17553098, Length=361, Percent_Identity=29.0858725761773, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17553096, Length=361, Percent_Identity=29.0858725761773, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI212645553, Length=331, Percent_Identity=27.4924471299094, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17554644, Length=112, Percent_Identity=49.1071428571429, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17568643, Length=69, Percent_Identity=60.8695652173913, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17507263, Length=94, Percent_Identity=50, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115532378, Length=98, Percent_Identity=43.8775510204082, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI86563276, Length=114, Percent_Identity=42.9824561403509, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17538236, Length=137, Percent_Identity=37.956204379562, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115532476, Length=67, Percent_Identity=50.7462686567164, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17563890, Length=67, Percent_Identity=56.7164179104478, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324321, Length=352, Percent_Identity=27.2727272727273, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324265, Length=154, Percent_Identity=40.2597402597403, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6323870, Length=69, Percent_Identity=59.4202898550725, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320888, Length=68, Percent_Identity=57.3529411764706, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324103, Length=123, Percent_Identity=38.2113821138211, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6322194, Length=67, Percent_Identity=52.2388059701493, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324252, Length=70, Percent_Identity=47.1428571428571, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323813, Length=127, Percent_Identity=37.7952755905512, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323119, Length=67, Percent_Identity=53.7313432835821, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6322388, Length=108, Percent_Identity=42.5925925925926, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI85726398, Length=352, Percent_Identity=34.6590909090909, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24658562, Length=335, Percent_Identity=32.8358208955224, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24658555, Length=335, Percent_Identity=32.8358208955224, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI19920464, Length=336, Percent_Identity=27.9761904761905, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI18858081, Length=349, Percent_Identity=27.5071633237822, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI17737735, Length=85, Percent_Identity=52.9411764705882, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI28574723, Length=85, Percent_Identity=52.9411764705882, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24668523, Length=85, Percent_Identity=52.9411764705882, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24654066, Length=121, Percent_Identity=42.1487603305785, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654070, Length=121, Percent_Identity=42.1487603305785, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654068, Length=121, Percent_Identity=42.1487603305785, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24654072, Length=121, Percent_Identity=42.1487603305785, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI20129487, Length=155, Percent_Identity=39.3548387096774, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24584014, Length=155, Percent_Identity=39.3548387096774, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24646562, Length=74, Percent_Identity=54.0540540540541, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24646560, Length=74, Percent_Identity=54.0540540540541, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24646558, Length=74, Percent_Identity=54.0540540540541, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24646556, Length=74, Percent_Identity=54.0540540540541, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI21357547, Length=74, Percent_Identity=54.0540540540541, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=56.25, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI45549272, Length=69, Percent_Identity=55.0724637681159, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI45552813, Length=69, Percent_Identity=55.0724637681159, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI45552811, Length=69, Percent_Identity=55.0724637681159, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24651436, Length=124, Percent_Identity=36.2903225806452, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI21358311, Length=133, Percent_Identity=34.5864661654135, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24651439, Length=76, Percent_Identity=44.7368421052632, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24762799, Length=111, Percent_Identity=40.5405405405405, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI21358273, Length=66, Percent_Identity=56.0606060606061, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357687, Length=63, Percent_Identity=55.5555555555556, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24668492, Length=70, Percent_Identity=45.7142857142857, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI17648033, Length=68, Percent_Identity=50, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24584630, Length=68, Percent_Identity=50, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355073, Length=66, Percent_Identity=45.4545454545455, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641698, Length=65, Percent_Identity=46.1538461538462, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24641696, Length=65, Percent_Identity=46.1538461538462, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI21355911, Length=65, Percent_Identity=52.3076923076923, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356411, Length=68, Percent_Identity=48.5294117647059, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 32595; Mature: 32464
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTDYYEVLGLKKGATEAEIKKAYRKLAVKYHPDKNPGDKGAEDKFKEINEAYAVLSDP CCCCCCCHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCH QKRAQYDQFGSSGFHQRYSQEDIFRGFDVGDIFKDMGFGTDDIFSRIFGGAGGFRQGGFG HHHHHHHHCCCCHHHHHCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC FGGGRRRGEDFTMEVPVTFRESYDGGEKRVAFMRDGKREELAVKIPAGVEDGARLRVAGK CCCCCCCCCCEEEEECEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEEC GGFGHGGGPTGDLYLIIKVGTDPHFTREGDDIVVERKIRFTDALLGASLDVPTLEGTKRI CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEEE KIPAGIQPGTKIRLKGLGFPRMGKAGKGDLFVRIGVSVPESLTPEQKTLVEELRGKGL EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure AQTDYYEVLGLKKGATEAEIKKAYRKLAVKYHPDKNPGDKGAEDKFKEINEAYAVLSDP CCCCCCHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCH QKRAQYDQFGSSGFHQRYSQEDIFRGFDVGDIFKDMGFGTDDIFSRIFGGAGGFRQGGFG HHHHHHHHCCCCHHHHHCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC FGGGRRRGEDFTMEVPVTFRESYDGGEKRVAFMRDGKREELAVKIPAGVEDGARLRVAGK CCCCCCCCCCEEEEECEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEEC GGFGHGGGPTGDLYLIIKVGTDPHFTREGDDIVVERKIRFTDALLGASLDVPTLEGTKRI CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEEE KIPAGIQPGTKIRLKGLGFPRMGKAGKGDLFVRIGVSVPESLTPEQKTLVEELRGKGL EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA