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The map label for this gene is ydiA [C]

Identifier: 78224574

GI number: 78224574

Start: 3797852

End: 3798661

Strand: Reverse

Name: ydiA [C]

Synonym: Gmet_3384

Alternate gene names: 78224574

Gene position: 3798661-3797852 (Counterclockwise)

Preceding gene: 78224575

Following gene: 78224573

Centisome position: 95.03

GC content: 59.88

Gene sequence:

>810_bases
ATGAACGGATCAATGCGGCATATCTACCTCTTTTCCGACGCCACGGGGGAAACCGTGGAGCGGGTGTTGCGCGCCGCCCT
CTCTCAGTTCCGCGACGTGGAGGCCCGCATCCACCGGATGAGCAAGATCCGGACGAGGGAAGATATCCTTTCCGCTCTGG
AGGACGTGCTCAAGGAGCCGGGGATAGTGATCTATACCCTTGTTGACGCGGAGCTGGCGCAACTGCTTCGGGACGAGGCC
GAGGCCCACGGCCTCGACGCCCTGGATCTCATCAGCTCGCTCCTCTTCAAGCTGTCGGATTTCTTCGGCGTTGCTCCCCA
GAATGAGCCGGGACTCCTGTACGAGCTCAACACCGAATATCACAAGCGGATCGAGGCCGTTGACTTTACGGTGAAGCACG
ACGACGGCCAGGACCCCCGTGGGCTCAGCAAGGCCGATTTTGTGCTGGTGGGGGTGTCGCGTTCCTCCAAGACCCCCCTC
TCCATGTACCTGGCCCACAAAGGGTACAAGGTGGCCAACGTCCCCCTGGTGAAGGGGATCGATCCTCCTGCTGAACTCTT
CAAGGTGGATCAGAACAAGATTGTGGGGCTCCTCATCGATCCCCACCGGCTTCTGGAGATACGGTCGGTGCGTCTCAAGA
ACCTGGGGCAGATGTCCAGGGGAAGCTACGCCGACTACGAAAAGATCGAGGACGAGCTCAACTACTGCCGCCAACTCTAC
CGGCGCAACCCCCAGTGGCTCGTCATCGACGTGACGAAACGATCGGTGGAAGAGTCGGCGGCGGAAATCATACAGAAACT
CTGCAGCTAG

Upstream 100 bases:

>100_bases
CTGGCGGGAATTTCGCTCATGAGAATTCTGCCATTGCCATGGTGAGAATACATGGTATATAGTATTTAATGAAAATGCTG
GCGACTCGAATAGGACGGCC

Downstream 100 bases:

>100_bases
AAACCATGAGTCCGCAGCATCGGAAAACAGAGAAAGGGAGGTGCAGACAATGAAGATTCTCGTGGTAGAGGACGAAAAGA
AGGTTTCGAGCTTCATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNGSMRHIYLFSDATGETVERVLRAALSQFRDVEARIHRMSKIRTREDILSALEDVLKEPGIVIYTLVDAELAQLLRDEA
EAHGLDALDLISSLLFKLSDFFGVAPQNEPGLLYELNTEYHKRIEAVDFTVKHDDGQDPRGLSKADFVLVGVSRSSKTPL
SMYLAHKGYKVANVPLVKGIDPPAELFKVDQNKIVGLLIDPHRLLEIRSVRLKNLGQMSRGSYADYEKIEDELNYCRQLY
RRNPQWLVIDVTKRSVEESAAEIIQKLCS

Sequences:

>Translated_269_residues
MNGSMRHIYLFSDATGETVERVLRAALSQFRDVEARIHRMSKIRTREDILSALEDVLKEPGIVIYTLVDAELAQLLRDEA
EAHGLDALDLISSLLFKLSDFFGVAPQNEPGLLYELNTEYHKRIEAVDFTVKHDDGQDPRGLSKADFVLVGVSRSSKTPL
SMYLAHKGYKVANVPLVKGIDPPAELFKVDQNKIVGLLIDPHRLLEIRSVRLKNLGQMSRGSYADYEKIEDELNYCRQLY
RRNPQWLVIDVTKRSVEESAAEIIQKLCS
>Mature_269_residues
MNGSMRHIYLFSDATGETVERVLRAALSQFRDVEARIHRMSKIRTREDILSALEDVLKEPGIVIYTLVDAELAQLLRDEA
EAHGLDALDLISSLLFKLSDFFGVAPQNEPGLLYELNTEYHKRIEAVDFTVKHDDGQDPRGLSKADFVLVGVSRSSKTPL
SMYLAHKGYKVANVPLVKGIDPPAELFKVDQNKIVGLLIDPHRLLEIRSVRLKNLGQMSRGSYADYEKIEDELNYCRQLY
RRNPQWLVIDVTKRSVEESAAEIIQKLCS

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=278, Percent_Identity=33.0935251798561, Blast_Score=107, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3384_GEOMG (Q39Q78)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_386321.1
- STRING:   Q39Q78
- GeneID:   3740699
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_3384
- NMPDR:   fig|269799.3.peg.3359
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   YANMDRI
- PhylomeDB:   Q39Q78
- ProtClustDB:   PRK05339
- BioCyc:   GMET269799:GMET_3384-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30526; Mature: 30526

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGSMRHIYLFSDATGETVERVLRAALSQFRDVEARIHRMSKIRTREDILSALEDVLKEP
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIVIYTLVDAELAQLLRDEAEAHGLDALDLISSLLFKLSDFFGVAPQNEPGLLYELNTEY
CEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHH
HKRIEAVDFTVKHDDGQDPRGLSKADFVLVGVSRSSKTPLSMYLAHKGYKVANVPLVKGI
HHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCEECCC
DPPAELFKVDQNKIVGLLIDPHRLLEIRSVRLKNLGQMSRGSYADYEKIEDELNYCRQLY
CCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
RRNPQWLVIDVTKRSVEESAAEIIQKLCS
HCCCCEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNGSMRHIYLFSDATGETVERVLRAALSQFRDVEARIHRMSKIRTREDILSALEDVLKEP
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIVIYTLVDAELAQLLRDEAEAHGLDALDLISSLLFKLSDFFGVAPQNEPGLLYELNTEY
CEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHH
HKRIEAVDFTVKHDDGQDPRGLSKADFVLVGVSRSSKTPLSMYLAHKGYKVANVPLVKGI
HHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCEECCC
DPPAELFKVDQNKIVGLLIDPHRLLEIRSVRLKNLGQMSRGSYADYEKIEDELNYCRQLY
CCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
RRNPQWLVIDVTKRSVEESAAEIIQKLCS
HCCCCEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA