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The map label for this gene is trg [H]

Identifier: 78224515

GI number: 78224515

Start: 3738391

End: 3739995

Strand: Direct

Name: trg [H]

Synonym: Gmet_3324

Alternate gene names: 78224515

Gene position: 3738391-3739995 (Clockwise)

Preceding gene: 78224514

Following gene: 78224528

Centisome position: 93.52

GC content: 66.17

Gene sequence:

>1605_bases
ATGAAGACATCCACCGCCAAAGAGACAAAACCGACTCTGCACAGCGAGATACAGAGGCTCGCCGAAGCCATGATGAACGG
CAGGCTCGACGAGCGGGGAAACCCCGCCCAGTTCACCGGTGACGACGCCGCCCTGGTCCTCACGGTCAACCGGATGCTGG
ACACCCTCGTGACCCCGCTGCGCCTGGCCGCCGGCGCCATCGACGAGATCGCCCACGGCAGGATCCCACCCTTCGTCATC
GACGACTATGCCGGGGAATACAACACCCTCAAGCGCAACCTCAACACCCTCCTGGCAACGCTGTACGGCCTCGACAGCGA
GACCCGGCACCTCATCGGCAACATCGGCGAGGGACGACTCCAGACCCGGGGCAACGACTGGGATTTCGAGGGGATCTGGC
GGGACCTCATCAGGGGGGTGAACGGCACCCTCGACGCGGTAATCGACCCGGTGAACGAAGCCGGGACCGTCCTGCAGCGC
CTGGCCCAATACGATCTGAGCGCCCGGATGCGGGGGAAGTACCACGGTGAGCATGCCGCCATCAAGAAGGCCATGAACGC
CACGGCGGAATCCCTCCACTCCGCCGTGACCCAGATGGCGGAGACGGTGGACCTGGTCTCCGCCGTCGGCGAGCAGATTG
CCGCCAGCAGCCAGACCGTCACCGCGGGTACCCGGGAGCAGGAGACGCAACTCACCGAGGCGGCCAGCGTCCTCAATCAC
ATCGCCGACACCTCCCAGAAGAGCGCCAAAAACACCGCCGACGCCCGGCAGGTGGCCCAGCAGGCCGCCGAGTCCATCGG
CACCGCCAAGACCGTCATGGACCAGATGCTCCACGCCATGGGGGAGATCCGCGGCTCCGCCGACAACACCGTCGGCATCG
TCCAGCAGATCGACGCCATCGCCAAGGAGACCGACAAGCTCTCCTCCAACGCCACCAGCAAGGCGGCCCTGATCCGCTCC
TCGGCCAGCGGCTTCAGCGTGGTCGCCTCCGAGGTGCGGAACCTGTCGAAGCGGTGCGAGGAGGCAGTCTCCCGGCTCCA
CGACTTCCGGCGCCGGGTCACTTTCACCCCCAATGCCGGCACCGACAGCACCACCGATCAGCTGGTGAGCGAGTATCTCG
ACCTCATCCACGACCTGAAGAGCGTCGCCTCCAACTCCGGGCTCCTGGGAGTGAACGCGGCCATTTCGGCGGCCCACGTG
GAGGGGGCCGGCAACGACTTCCAGGTCCTCACCGAAGAGATCCGTGAACTGGCCAAGCGCTCCACCGACGCGGCCAAGCA
GACCGACACCCTCATCAGGACATCGGTGGAGCAGGCCCGCAAGGGAGAGGACCTTTCCCAGGCAATCGACGGCCACCTCA
CCACGGCGGTGACCGGGGCATCCACCATCAGCTCCCTCACCGACGAGATCTCCCAGAGCAGCCAGGAACAGGCCAGCGCC
ATCGAGGAGATCAGCTGCTCCGTCACCCACATCAACGAGGTCACCCGGCAGAACGCCGCCTGCGCCCTCTCGTCGTCCGA
AGTGGCCCAGGGGCTGGGGCAGCAGGTGACGAAGTTGTCGAAGATGGTGAGCAAGTTCCGGCTGGCGAGGGCGGCGGGGC
AATAA

Upstream 100 bases:

>100_bases
CAGACCCGCGACGCCATGTCGCCGGAGGTGGCCGCCGCCATCGAGCCCGCCACCGCCTCCATCCGGGAACATCTTCACAC
TCTCCGCCAAGGAACCTGAC

Downstream 100 bases:

>100_bases
AAGCAGCCAATGCGGGACAAAAAAAGGGGGAGCCGGCAGTCAGCTCCCCCTTTTTCATCACCACTCCCTGAAGAACCCTG
TGTCAGGACTTCAGATACTC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKTSTAKETKPTLHSEIQRLAEAMMNGRLDERGNPAQFTGDDAALVLTVNRMLDTLVTPLRLAAGAIDEIAHGRIPPFVI
DDYAGEYNTLKRNLNTLLATLYGLDSETRHLIGNIGEGRLQTRGNDWDFEGIWRDLIRGVNGTLDAVIDPVNEAGTVLQR
LAQYDLSARMRGKYHGEHAAIKKAMNATAESLHSAVTQMAETVDLVSAVGEQIAASSQTVTAGTREQETQLTEAASVLNH
IADTSQKSAKNTADARQVAQQAAESIGTAKTVMDQMLHAMGEIRGSADNTVGIVQQIDAIAKETDKLSSNATSKAALIRS
SASGFSVVASEVRNLSKRCEEAVSRLHDFRRRVTFTPNAGTDSTTDQLVSEYLDLIHDLKSVASNSGLLGVNAAISAAHV
EGAGNDFQVLTEEIRELAKRSTDAAKQTDTLIRTSVEQARKGEDLSQAIDGHLTTAVTGASTISSLTDEISQSSQEQASA
IEEISCSVTHINEVTRQNAACALSSSEVAQGLGQQVTKLSKMVSKFRLARAAGQ

Sequences:

>Translated_534_residues
MKTSTAKETKPTLHSEIQRLAEAMMNGRLDERGNPAQFTGDDAALVLTVNRMLDTLVTPLRLAAGAIDEIAHGRIPPFVI
DDYAGEYNTLKRNLNTLLATLYGLDSETRHLIGNIGEGRLQTRGNDWDFEGIWRDLIRGVNGTLDAVIDPVNEAGTVLQR
LAQYDLSARMRGKYHGEHAAIKKAMNATAESLHSAVTQMAETVDLVSAVGEQIAASSQTVTAGTREQETQLTEAASVLNH
IADTSQKSAKNTADARQVAQQAAESIGTAKTVMDQMLHAMGEIRGSADNTVGIVQQIDAIAKETDKLSSNATSKAALIRS
SASGFSVVASEVRNLSKRCEEAVSRLHDFRRRVTFTPNAGTDSTTDQLVSEYLDLIHDLKSVASNSGLLGVNAAISAAHV
EGAGNDFQVLTEEIRELAKRSTDAAKQTDTLIRTSVEQARKGEDLSQAIDGHLTTAVTGASTISSLTDEISQSSQEQASA
IEEISCSVTHINEVTRQNAACALSSSEVAQGLGQQVTKLSKMVSKFRLARAAGQ
>Mature_534_residues
MKTSTAKETKPTLHSEIQRLAEAMMNGRLDERGNPAQFTGDDAALVLTVNRMLDTLVTPLRLAAGAIDEIAHGRIPPFVI
DDYAGEYNTLKRNLNTLLATLYGLDSETRHLIGNIGEGRLQTRGNDWDFEGIWRDLIRGVNGTLDAVIDPVNEAGTVLQR
LAQYDLSARMRGKYHGEHAAIKKAMNATAESLHSAVTQMAETVDLVSAVGEQIAASSQTVTAGTREQETQLTEAASVLNH
IADTSQKSAKNTADARQVAQQAAESIGTAKTVMDQMLHAMGEIRGSADNTVGIVQQIDAIAKETDKLSSNATSKAALIRS
SASGFSVVASEVRNLSKRCEEAVSRLHDFRRRVTFTPNAGTDSTTDQLVSEYLDLIHDLKSVASNSGLLGVNAAISAAHV
EGAGNDFQVLTEEIRELAKRSTDAAKQTDTLIRTSVEQARKGEDLSQAIDGHLTTAVTGASTISSLTDEISQSSQEQASA
IEEISCSVTHINEVTRQNAACALSSSEVAQGLGQQVTKLSKMVSKFRLARAAGQ

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=279, Percent_Identity=29.3906810035842, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1788195, Length=156, Percent_Identity=32.6923076923077, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788194, Length=155, Percent_Identity=30.9677419354839, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI2367378, Length=166, Percent_Identity=30.7228915662651, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57125; Mature: 57125

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSTAKETKPTLHSEIQRLAEAMMNGRLDERGNPAQFTGDDAALVLTVNRMLDTLVTPL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
RLAAGAIDEIAHGRIPPFVIDDYAGEYNTLKRNLNTLLATLYGLDSETRHLIGNIGEGRL
HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
QTRGNDWDFEGIWRDLIRGVNGTLDAVIDPVNEAGTVLQRLAQYDLSARMRGKYHGEHAA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IKKAMNATAESLHSAVTQMAETVDLVSAVGEQIAASSQTVTAGTREQETQLTEAASVLNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHH
IADTSQKSAKNTADARQVAQQAAESIGTAKTVMDQMLHAMGEIRGSADNTVGIVQQIDAI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AKETDKLSSNATSKAALIRSSASGFSVVASEVRNLSKRCEEAVSRLHDFRRRVTFTPNAG
HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
TDSTTDQLVSEYLDLIHDLKSVASNSGLLGVNAAISAAHVEGAGNDFQVLTEEIRELAKR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
STDAAKQTDTLIRTSVEQARKGEDLSQAIDGHLTTAVTGASTISSLTDEISQSSQEQASA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEISCSVTHINEVTRQNAACALSSSEVAQGLGQQVTKLSKMVSKFRLARAAGQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTSTAKETKPTLHSEIQRLAEAMMNGRLDERGNPAQFTGDDAALVLTVNRMLDTLVTPL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
RLAAGAIDEIAHGRIPPFVIDDYAGEYNTLKRNLNTLLATLYGLDSETRHLIGNIGEGRL
HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
QTRGNDWDFEGIWRDLIRGVNGTLDAVIDPVNEAGTVLQRLAQYDLSARMRGKYHGEHAA
CCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IKKAMNATAESLHSAVTQMAETVDLVSAVGEQIAASSQTVTAGTREQETQLTEAASVLNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHH
IADTSQKSAKNTADARQVAQQAAESIGTAKTVMDQMLHAMGEIRGSADNTVGIVQQIDAI
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AKETDKLSSNATSKAALIRSSASGFSVVASEVRNLSKRCEEAVSRLHDFRRRVTFTPNAG
HHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
TDSTTDQLVSEYLDLIHDLKSVASNSGLLGVNAAISAAHVEGAGNDFQVLTEEIRELAKR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
STDAAKQTDTLIRTSVEQARKGEDLSQAIDGHLTTAVTGASTISSLTDEISQSSQEQASA
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEISCSVTHINEVTRQNAACALSSSEVAQGLGQQVTKLSKMVSKFRLARAAGQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]