| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is menB [H]
Identifier: 78224496
GI number: 78224496
Start: 3719175
End: 3720299
Strand: Reverse
Name: menB [H]
Synonym: Gmet_3305
Alternate gene names: 78224496
Gene position: 3720299-3719175 (Counterclockwise)
Preceding gene: 78224497
Following gene: 78224495
Centisome position: 93.07
GC content: 62.58
Gene sequence:
>1125_bases ATGGCTAGGACAAATGTGATGATCGCCGAGACCTTTCCGGAATATCTGGTCGACCACAACCTGATCGACTGTGAGGTGGA GAGCCTCTGCAACGGCATGGTCCGGTACGAGAAACGGCCGGCCAGGCGCCGTGACGGGTCGGTGGCGGAAGGGCTCTACA ACGCCTGGATCATCTTCAACAACCCCAGGCAGTACAACTCCTACACGACCGAGATGGTCAAGGCCACCATCCTTGCCTTC CGTCGCGCCTCCGTCGATCGCGAGGTGAATGCCGTGGTCTTCACCGGCGTTGGCGACAAGGCGTTCTGCACCGGCGGCAA CACCAAGGAGTACGCGGAGTACTATGCCGGCAACCCCCAGGAGTACCGGCAGTACATGCGGCTGTTCAACGACATGGTCT CCTCCATCCTCGGCTGCGACCGGCCGGTGATCTGCCGGGTGAACGGCATGCGGATCGGCGGCGGCCAGGAGATCGGCATG GCCTGCGACTTCTCCATCGCCCAGGATCTGGCGAAATTCGGGCAGGCTGGCCCCAAGCACGGCTCAGCCGCCATCGGCGG GGCAACCGACTTCCTGCCGATCATGATTGGCTGCGAGCAGGCCATGGTGTCCGGGACCCTCTGCGAGCCCTTCTCGGCCC ACAAGGCGGCGCGGCTCGGCATCATCGCCGATGTGGTCCCGGCCCTCAAGGTTGGCGGTACGTTCGTCGCCAACCCCACC GTCGTCACCGACCGGTTCCTGGACGAGTATGGCAGGGTAGTCCAGGGCGAATTCAAGACCGGCGCCGACTTCAAGGCGGG ACAGGCCCGGATCAAGGAAGGGGAGGTCGATCTCAGCCTCCTCGATGAGAAAGTGGAAGAGCTCTGCGCCAAGCTTCTGG AGACCTTCCCCGAGTGCATGACCAAGAGCTTGGAAGAGTTGCGCAAACCAAAGCTCCAGGCGTGGAACCTGAACAAGGAG AACTCCCGCGCGTGGCTGGCGCTCAACATGATGAACGAGGCCCGCATCGGCTTCCGGGCGTTCAATGAAGGAACCAAGGA GACGGGGCGCGAGATCGATTTCGTCAAGCTTCGCCGTCAGCTGGCCGAGGGAACGCCCTGGGCCGAGGAGTTGATTGAGA TTTGA
Upstream 100 bases:
>100_bases ACCCGCATGGTGACGGGGAGGGCCCTGTTGTTCCCGTAAAGGGTAACAACAGGAATGTATCGTGACATCAGGCAGATAGC CTTAAGAGCGGAGAAAGAGA
Downstream 100 bases:
>100_bases TGCTTCCGGTCGTCACGATGATCCGAGATGTCATCAGGTGCGTAACGTGCCGGCAGGTGTGCCGAACCAATGAAACCATC CAACGGGGGTATCGTTTATG
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MARTNVMIAETFPEYLVDHNLIDCEVESLCNGMVRYEKRPARRRDGSVAEGLYNAWIIFNNPRQYNSYTTEMVKATILAF RRASVDREVNAVVFTGVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSSILGCDRPVICRVNGMRIGGGQEIGM ACDFSIAQDLAKFGQAGPKHGSAAIGGATDFLPIMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKVGGTFVANPT VVTDRFLDEYGRVVQGEFKTGADFKAGQARIKEGEVDLSLLDEKVEELCAKLLETFPECMTKSLEELRKPKLQAWNLNKE NSRAWLALNMMNEARIGFRAFNEGTKETGREIDFVKLRRQLAEGTPWAEELIEI
Sequences:
>Translated_374_residues MARTNVMIAETFPEYLVDHNLIDCEVESLCNGMVRYEKRPARRRDGSVAEGLYNAWIIFNNPRQYNSYTTEMVKATILAF RRASVDREVNAVVFTGVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSSILGCDRPVICRVNGMRIGGGQEIGM ACDFSIAQDLAKFGQAGPKHGSAAIGGATDFLPIMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKVGGTFVANPT VVTDRFLDEYGRVVQGEFKTGADFKAGQARIKEGEVDLSLLDEKVEELCAKLLETFPECMTKSLEELRKPKLQAWNLNKE NSRAWLALNMMNEARIGFRAFNEGTKETGREIDFVKLRRQLAEGTPWAEELIEI >Mature_373_residues ARTNVMIAETFPEYLVDHNLIDCEVESLCNGMVRYEKRPARRRDGSVAEGLYNAWIIFNNPRQYNSYTTEMVKATILAFR RASVDREVNAVVFTGVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSSILGCDRPVICRVNGMRIGGGQEIGMA CDFSIAQDLAKFGQAGPKHGSAAIGGATDFLPIMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKVGGTFVANPTV VTDRFLDEYGRVVQGEFKTGADFKAGQARIKEGEVDLSLLDEKVEELCAKLLETFPECMTKSLEELRKPKLQAWNLNKEN SRAWLALNMMNEARIGFRAFNEGTKETGREIDFVKLRRQLAEGTPWAEELIEI
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) (Probable) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=171, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1788597, Length=194, Percent_Identity=33.5051546391753, Blast_Score=107, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17554946, Length=223, Percent_Identity=26.9058295964126, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17549921, Length=191, Percent_Identity=26.7015706806283, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17535521, Length=215, Percent_Identity=23.2558139534884, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI20129971, Length=189, Percent_Identity=32.8042328042328, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24653477, Length=189, Percent_Identity=32.8042328042328, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24654903, Length=170, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 41613; Mature: 41482
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTNVMIAETFPEYLVDHNLIDCEVESLCNGMVRYEKRPARRRDGSVAEGLYNAWIIFN CCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEC NPRQYNSYTTEMVKATILAFRRASVDREVNAVVFTGVGDKAFCTGGNTKEYAEYYAGNPQ CCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHCCCHH EYRQYMRLFNDMVSSILGCDRPVICRVNGMRIGGGQEIGMACDFSIAQDLAKFGQAGPKH HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCEECHHHHHHHHHHCCCCCCC GSAAIGGATDFLPIMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKVGGTFVANPT CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC VVTDRFLDEYGRVVQGEFKTGADFKAGQARIKEGEVDLSLLDEKVEELCAKLLETFPECM HHHHHHHHHHCHHEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TKSLEELRKPKLQAWNLNKENSRAWLALNMMNEARIGFRAFNEGTKETGREIDFVKLRRQ HHHHHHHHCCCCEEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH LAEGTPWAEELIEI HHCCCCHHHHHHCC >Mature Secondary Structure ARTNVMIAETFPEYLVDHNLIDCEVESLCNGMVRYEKRPARRRDGSVAEGLYNAWIIFN CCCCEEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEC NPRQYNSYTTEMVKATILAFRRASVDREVNAVVFTGVGDKAFCTGGNTKEYAEYYAGNPQ CCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHCCCHH EYRQYMRLFNDMVSSILGCDRPVICRVNGMRIGGGQEIGMACDFSIAQDLAKFGQAGPKH HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCEECHHHHHHHHHHCCCCCCC GSAAIGGATDFLPIMIGCEQAMVSGTLCEPFSAHKAARLGIIADVVPALKVGGTFVANPT CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC VVTDRFLDEYGRVVQGEFKTGADFKAGQARIKEGEVDLSLLDEKVEELCAKLLETFPECM HHHHHHHHHHCHHEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TKSLEELRKPKLQAWNLNKENSRAWLALNMMNEARIGFRAFNEGTKETGREIDFVKLRRQ HHHHHHHHCCCCEEECCCCCCCCEEEEEEEHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH LAEGTPWAEELIEI HHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA