| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is cat2 [H]
Identifier: 78224495
GI number: 78224495
Start: 3717764
End: 3719077
Strand: Reverse
Name: cat2 [H]
Synonym: Gmet_3304
Alternate gene names: 78224495
Gene position: 3719077-3717764 (Counterclockwise)
Preceding gene: 78224496
Following gene: 78224494
Centisome position: 93.04
GC content: 59.59
Gene sequence:
>1314_bases ATGGAAAGCGTAAAAAATGCCAAGCGCAGCTATGAAAAGGAGTACCGGCAGAAAGTCTGCTCGCCGGTAGAAGCCGCGGC AGTCGTCAAGTCGGGGGATTGTCTCTGCTTCCCCATCAGCGTCGGGGAGCCGACGCTCTTCGTGAGGGCGTTGGCGGCCC GCAGGCACGAGTTGGAAGGGGTCGTCATCAACCAGCAGCATCACCTCTGCCCCGATTACTTCACGGAGGATTCGGCTCCG CACATAAAGGTCAACGCATGGTTCACGAGCCACGTTTCCCGCGAGGCGGTCCAGAAGGGGTGGGCGGATTTCGTTCCCAA CTATTTCCATGAGGTTCCCCGGCTCCTGCGTGATTACTGGCCCGTTGACGTGGCCGGGACCGTGGTTTCCCCCATGGACG AGCATGGCTACTTCACCTGCAGCCTCTCCGTGGCCTACACCATGGAGGCGATTAAGAAGGCAAAGAAAGTGGTGGTGCAG GTGAACCCCCAGGCCCCCCGGACCCACGGCAACTGCCATATTCACATCTCCGAGGTGGACCACATCATCGAGTGTGACGA GCCCCTGGCATCCTTGACCATCCCCCCCATCACGCCAGTTGAAGAGGCTATCGGCGGCTATATCTCGGAACTTGTGGAAG ACGGTTCATGCCTGCAACTCGGCTGGGGCGGCATACCGAACTCGGTCTGCAAGGCACTGCTGCACAAGAAGGATCTGGGG ATACACACCGAGCTCCTTTCCGACGGCATGGTGGACCTGATGCTTTCAGGGGCGGTCAACAACTCCCGCAAGCAAACCCA TACCGGCAAGACCGTCGCCACGTTCGCCCTCGGCACCAGCCGGCTCTATGAGTTCATGAACGAAAATCCGCGGATAGAGA TGCACCCGGTGGATTACGTCAACTATCCCCACAACATCGGCAAAAACGACAACGTGGTGTCGATCAACGCCACGCTTGAG GTGGACCTGCTCGGCCAGTGCTGTTCCGAGTCGTTCGGGCATCTGCAGTACAGCGGAACCGGCGGCCAGGCCGATTTCGT CCGGGGTTCGAATATCTCCAACGGCGGGAAAGGCTTCATCACCACGGCGTCCACCGCAAAAAACGGAACCATATCACGCA TCGTTCCGACCTTGGCGCCGGGGGCATCTGTCACCACCGGGAAGAACGATGTGGATTATGTGGTCACCGAGTTCGGGGTG GCCAAGCTCCGGGGGCAGACTGCCCGGCAACGGGCCATCAACCTGATCAACATCGCACACCCCGATTTCCGGGGCGAACT CACCGAGGCAGCCAGAAGGATGAACCGCATTTAG
Upstream 100 bases:
>100_bases TGATGCTTCCGGTCGTCACGATGATCCGAGATGTCATCAGGTGCGTAACGTGCCGGCAGGTGTGCCGAACCAATGAAACC ATCCAACGGGGGTATCGTTT
Downstream 100 bases:
>100_bases AGCCTGTCGGCAGTACTGTCCCGCAACCGGTTTGGGAGGGGTACGTGATGAGATTTACATTGATGTATTGTGCAGCGGCT TTGGTAATGCTTGCGGTGCC
Product: Acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MESVKNAKRSYEKEYRQKVCSPVEAAAVVKSGDCLCFPISVGEPTLFVRALAARRHELEGVVINQQHHLCPDYFTEDSAP HIKVNAWFTSHVSREAVQKGWADFVPNYFHEVPRLLRDYWPVDVAGTVVSPMDEHGYFTCSLSVAYTMEAIKKAKKVVVQ VNPQAPRTHGNCHIHISEVDHIIECDEPLASLTIPPITPVEEAIGGYISELVEDGSCLQLGWGGIPNSVCKALLHKKDLG IHTELLSDGMVDLMLSGAVNNSRKQTHTGKTVATFALGTSRLYEFMNENPRIEMHPVDYVNYPHNIGKNDNVVSINATLE VDLLGQCCSESFGHLQYSGTGGQADFVRGSNISNGGKGFITTASTAKNGTISRIVPTLAPGASVTTGKNDVDYVVTEFGV AKLRGQTARQRAINLINIAHPDFRGELTEAARRMNRI
Sequences:
>Translated_437_residues MESVKNAKRSYEKEYRQKVCSPVEAAAVVKSGDCLCFPISVGEPTLFVRALAARRHELEGVVINQQHHLCPDYFTEDSAP HIKVNAWFTSHVSREAVQKGWADFVPNYFHEVPRLLRDYWPVDVAGTVVSPMDEHGYFTCSLSVAYTMEAIKKAKKVVVQ VNPQAPRTHGNCHIHISEVDHIIECDEPLASLTIPPITPVEEAIGGYISELVEDGSCLQLGWGGIPNSVCKALLHKKDLG IHTELLSDGMVDLMLSGAVNNSRKQTHTGKTVATFALGTSRLYEFMNENPRIEMHPVDYVNYPHNIGKNDNVVSINATLE VDLLGQCCSESFGHLQYSGTGGQADFVRGSNISNGGKGFITTASTAKNGTISRIVPTLAPGASVTTGKNDVDYVVTEFGV AKLRGQTARQRAINLINIAHPDFRGELTEAARRMNRI >Mature_437_residues MESVKNAKRSYEKEYRQKVCSPVEAAAVVKSGDCLCFPISVGEPTLFVRALAARRHELEGVVINQQHHLCPDYFTEDSAP HIKVNAWFTSHVSREAVQKGWADFVPNYFHEVPRLLRDYWPVDVAGTVVSPMDEHGYFTCSLSVAYTMEAIKKAKKVVVQ VNPQAPRTHGNCHIHISEVDHIIECDEPLASLTIPPITPVEEAIGGYISELVEDGSCLQLGWGGIPNSVCKALLHKKDLG IHTELLSDGMVDLMLSGAVNNSRKQTHTGKTVATFALGTSRLYEFMNENPRIEMHPVDYVNYPHNIGKNDNVVSINATLE VDLLGQCCSESFGHLQYSGTGGQADFVRGSNISNGGKGFITTASTAKNGTISRIVPTLAPGASVTTGKNDVDYVVTEFGV AKLRGQTARQRAINLINIAHPDFRGELTEAARRMNRI
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=461, Percent_Identity=23.2104121475054, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32563853, Length=426, Percent_Identity=39.2018779342723, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17538151, Length=426, Percent_Identity=36.8544600938967, Blast_Score=252, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6319456, Length=393, Percent_Identity=25.9541984732824, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358615, Length=420, Percent_Identity=40.7142857142857, Blast_Score=290, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 47912; Mature: 47912
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVKNAKRSYEKEYRQKVCSPVEAAAVVKSGDCLCFPISVGEPTLFVRALAARRHELEG CCHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHCCE VVINQQHHLCPDYFTEDSAPHIKVNAWFTSHVSREAVQKGWADFVPNYFHEVPRLLRDYW EEECCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHCC PVDVAGTVVSPMDEHGYFTCSLSVAYTMEAIKKAKKVVVQVNPQAPRTHGNCHIHISEVD CCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCC HIIECDEPLASLTIPPITPVEEAIGGYISELVEDGSCLQLGWGGIPNSVCKALLHKKDLG HHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCC IHTELLSDGMVDLMLSGAVNNSRKQTHTGKTVATFALGTSRLYEFMNENPRIEMHPVDYV HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCCCC NYPHNIGKNDNVVSINATLEVDLLGQCCSESFGHLQYSGTGGQADFVRGSNISNGGKGFI CCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCEEECCCCCCCEEEECCCCCCCCCEEE TTASTAKNGTISRIVPTLAPGASVTTGKNDVDYVVTEFGVAKLRGQTARQRAINLINIAH EECCCCCCCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEECC PDFRGELTEAARRMNRI CCCCHHHHHHHHHHHCC >Mature Secondary Structure MESVKNAKRSYEKEYRQKVCSPVEAAAVVKSGDCLCFPISVGEPTLFVRALAARRHELEG CCHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHCCE VVINQQHHLCPDYFTEDSAPHIKVNAWFTSHVSREAVQKGWADFVPNYFHEVPRLLRDYW EEECCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHCC PVDVAGTVVSPMDEHGYFTCSLSVAYTMEAIKKAKKVVVQVNPQAPRTHGNCHIHISEVD CCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCC HIIECDEPLASLTIPPITPVEEAIGGYISELVEDGSCLQLGWGGIPNSVCKALLHKKDLG HHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCC IHTELLSDGMVDLMLSGAVNNSRKQTHTGKTVATFALGTSRLYEFMNENPRIEMHPVDYV HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCCCC NYPHNIGKNDNVVSINATLEVDLLGQCCSESFGHLQYSGTGGQADFVRGSNISNGGKGFI CCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCEEECCCCCCCEEEECCCCCCCCCEEE TTASTAKNGTISRIVPTLAPGASVTTGKNDVDYVVTEFGVAKLRGQTARQRAINLINIAH EECCCCCCCCHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEECC PDFRGELTEAARRMNRI CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]