| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is accA1 [H]
Identifier: 78224483
GI number: 78224483
Start: 3704587
End: 3706593
Strand: Direct
Name: accA1 [H]
Synonym: Gmet_3292
Alternate gene names: 78224483
Gene position: 3704587-3706593 (Clockwise)
Preceding gene: 78224482
Following gene: 78224484
Centisome position: 92.67
GC content: 66.87
Gene sequence:
>2007_bases ATGTTCGATACGATTCTCATTGCAAACCGGGGCGAAATTGCCTGCCGCGTCATCAGCACCGCCCGCCGCCTCGGCATCCG CACCGTGGCCGTCTACTCCGACACCGACGCCGACGCCCTTCACGTGACCATGGCCGACGAGGCGTACCACATTGGCCTGG CCCCTGCCCGGGAAAGCTACCTGAGAGGTGACGTCATCCTGGAGGTGGCGGCCAGGAGCGGCGCCCAAGCCATTCACCCC GGCTATGGCTTCCTTTCCGAAAACGCTGAATTTGCAGAAGCCTGCGCCAAGGCCGGTGTCGTATTCATCGGCCCCCCCAC CGGGGCGATTCGCGCCATGGGCTCCAAGAGCGCCGCCAAGGAGATCATGGAGAAGGCCGGCGTCCCCCTGGTTCCCGGCT ACCACGGCGAGAACCAGGATCCGGAGTTTCTGGGGCGGGAAGCGAAGCGGATTGGTTTCCCGGTCCTCATCAAGGCGAGT GCCGGCGGTGGCGGCAAAGGGATGCGGGCCGTGCGGGAGGCAGTGGAGTTTCCCGATGCCCTCGCCTCGGCCAAGCGGGA GGCCCAGGCCTCCTTCGGCGATGACCGGGTGCTCCTCGAAAAATACCTCACCAAGCCCCGCCACGTGGAGATCCAGGTTT TCGCCGATACCCACGGCAACGCGGTGCACCTCTTCGAACGCGACTGCTCCATCCAGCGCCGCCACCAGAAGGTGCTGGAG GAGGCACCGGCCCCCGGCATGAAGCCTGCCCTCCGCAAGAAGATGGGGGAGGCGGCGGTAGCCGCGGCCAGCGCCATCGG CTACGTGGGGGCGGGAACCGTGGAGTTTCTTCTGGACGAAGACGGCTCCTTCTACTTCATGGAGATGAACACCCGCCTCC AGGTTGAGCACCCCGTGACCGAGATGATCACCGGCCAGGACCTGGTTGAGTGGCAGCTCCAGGTGGCGGCCGGCGCCCCC CTCCCCTGCCGGCAGAAGGATCTCGCCATTGGCGGCCACGCCATCGAGGCCCGCATCTACGCCGAAGACCCGGCCAAGGA CTTTCTCCCCTCCATCGGCCGGCTGGCCCATCTCCGCACCCCCGCCGAAAGCGCCAACGTCCGGATCGACACCGGCGTGG GCCAGGGGGGGGAGGTGAGCATCTACTATGACCCCATGATTGCCAAACTGATCGTCTGGGACACCGACCGGGCCGGGGCA CTGCGCCGACTTCAGAAGGCCCTGGCCGACTATCAGGTGGTCGGGGTTACCACCAACATCGGCTTCCTCGGGAGCGTAGC GGCACACCCCGCCTTTGCCGCCGCAGACCTGGACACCGGCTTTATCGAGCGGCACCGGACCGACCTCTTCCCCGATCCCA GCCTGGCATCGGACCGGACCCTGGCCCTCGCCTCCCTCGACGTGCTCCTGCGCCGGGCCGCCGAGGCGAAGCGGACGGCC CTCGCCTCCGCCGATCCCTATTCCCCGTGGCACCAGACCAGCGGCTGGCGCCTCAACTTCGACAACCACCACGACCTCCA CTTCCTGGACGGGGAAAAGGTCGTGACGATCACGGTCCACTACCGCGCAGAGGGGTATCTCCTTGCCCTGCCGGGGGGAG ATCTCCTTGTCCGGGGCGAGCTGGATGCAGCCGGAGATATTCTGGCCGATCTGGGTGGGGCACGGGTTAAGGCCACCGTG GTTCGCCACGGCGCCACCCTCACCATCATGAAGGGAGGGCGGAGCCATACTCTGGCCATCCATAACCCCTACGCCCTCTC CGGCGACGAGGAGGGTGCCGGCGGCAGACTCACCGCCCCAATGCCGGGAAAAGTTGTGGCGGTCATGGTGGAACCGGGGG AGCGGGTGGAAAAGGGGCGCCCCCTCATGATCCTGGAGGCCATGAAGATGGAGCACACCATCGCCGCCCCCCGGGACGGA CTCGTGGCCCGGCTCAACTTCACCGTCGGCTCCCTGGTGAGCGATGGGGCGGAACTTCTGGCCCTTGCCGACGAAGAGGG GGTCTGA
Upstream 100 bases:
>100_bases CCGAACGGATCGCCGACACCCGCGCCTCCGCCGAGGGGAAAGAGGGGCTCTCCGCCTTCCTGGAAAAAAGAAAACCTCGC TGGGTGAAAGGATAGATACC
Downstream 100 bases:
>100_bases GATGCCAATGCCGACGCGGGTGAAGATGGTGGAGGTGGGGCCCCGGGACGGTCTCCAGAACGAGAAGGCGATCATCCCGG CCGAGGTAAAGATCGCCCTT
Product: 3-methylcrotonoyl-CoA carboxylase subunit alpha
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MFDTILIANRGEIACRVISTARRLGIRTVAVYSDTDADALHVTMADEAYHIGLAPARESYLRGDVILEVAARSGAQAIHP GYGFLSENAEFAEACAKAGVVFIGPPTGAIRAMGSKSAAKEIMEKAGVPLVPGYHGENQDPEFLGREAKRIGFPVLIKAS AGGGGKGMRAVREAVEFPDALASAKREAQASFGDDRVLLEKYLTKPRHVEIQVFADTHGNAVHLFERDCSIQRRHQKVLE EAPAPGMKPALRKKMGEAAVAAASAIGYVGAGTVEFLLDEDGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLQVAAGAP LPCRQKDLAIGGHAIEARIYAEDPAKDFLPSIGRLAHLRTPAESANVRIDTGVGQGGEVSIYYDPMIAKLIVWDTDRAGA LRRLQKALADYQVVGVTTNIGFLGSVAAHPAFAAADLDTGFIERHRTDLFPDPSLASDRTLALASLDVLLRRAAEAKRTA LASADPYSPWHQTSGWRLNFDNHHDLHFLDGEKVVTITVHYRAEGYLLALPGGDLLVRGELDAAGDILADLGGARVKATV VRHGATLTIMKGGRSHTLAIHNPYALSGDEEGAGGRLTAPMPGKVVAVMVEPGERVEKGRPLMILEAMKMEHTIAAPRDG LVARLNFTVGSLVSDGAELLALADEEGV
Sequences:
>Translated_668_residues MFDTILIANRGEIACRVISTARRLGIRTVAVYSDTDADALHVTMADEAYHIGLAPARESYLRGDVILEVAARSGAQAIHP GYGFLSENAEFAEACAKAGVVFIGPPTGAIRAMGSKSAAKEIMEKAGVPLVPGYHGENQDPEFLGREAKRIGFPVLIKAS AGGGGKGMRAVREAVEFPDALASAKREAQASFGDDRVLLEKYLTKPRHVEIQVFADTHGNAVHLFERDCSIQRRHQKVLE EAPAPGMKPALRKKMGEAAVAAASAIGYVGAGTVEFLLDEDGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLQVAAGAP LPCRQKDLAIGGHAIEARIYAEDPAKDFLPSIGRLAHLRTPAESANVRIDTGVGQGGEVSIYYDPMIAKLIVWDTDRAGA LRRLQKALADYQVVGVTTNIGFLGSVAAHPAFAAADLDTGFIERHRTDLFPDPSLASDRTLALASLDVLLRRAAEAKRTA LASADPYSPWHQTSGWRLNFDNHHDLHFLDGEKVVTITVHYRAEGYLLALPGGDLLVRGELDAAGDILADLGGARVKATV VRHGATLTIMKGGRSHTLAIHNPYALSGDEEGAGGRLTAPMPGKVVAVMVEPGERVEKGRPLMILEAMKMEHTIAAPRDG LVARLNFTVGSLVSDGAELLALADEEGV >Mature_668_residues MFDTILIANRGEIACRVISTARRLGIRTVAVYSDTDADALHVTMADEAYHIGLAPARESYLRGDVILEVAARSGAQAIHP GYGFLSENAEFAEACAKAGVVFIGPPTGAIRAMGSKSAAKEIMEKAGVPLVPGYHGENQDPEFLGREAKRIGFPVLIKAS AGGGGKGMRAVREAVEFPDALASAKREAQASFGDDRVLLEKYLTKPRHVEIQVFADTHGNAVHLFERDCSIQRRHQKVLE EAPAPGMKPALRKKMGEAAVAAASAIGYVGAGTVEFLLDEDGSFYFMEMNTRLQVEHPVTEMITGQDLVEWQLQVAAGAP LPCRQKDLAIGGHAIEARIYAEDPAKDFLPSIGRLAHLRTPAESANVRIDTGVGQGGEVSIYYDPMIAKLIVWDTDRAGA LRRLQKALADYQVVGVTTNIGFLGSVAAHPAFAAADLDTGFIERHRTDLFPDPSLASDRTLALASLDVLLRRAAEAKRTA LASADPYSPWHQTSGWRLNFDNHHDLHFLDGEKVVTITVHYRAEGYLLALPGGDLLVRGELDAAGDILADLGGARVKATV VRHGATLTIMKGGRSHTLAIHNPYALSGDEEGAGGRLTAPMPGKVVAVMVEPGERVEKGRPLMILEAMKMEHTIAAPRDG LVARLNFTVGSLVSDGAELLALADEEGV
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=669, Percent_Identity=51.1210762331839, Blast_Score=684, Evalue=0.0, Organism=Homo sapiens, GI189095269, Length=684, Percent_Identity=43.859649122807, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI65506442, Length=684, Percent_Identity=43.859649122807, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI295821183, Length=674, Percent_Identity=42.7299703264095, Blast_Score=495, Evalue=1e-140, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=46.0850111856823, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=46.0850111856823, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=46.0850111856823, Blast_Score=375, Evalue=1e-104, Organism=Homo sapiens, GI38679977, Length=708, Percent_Identity=30.225988700565, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI38679967, Length=708, Percent_Identity=30.225988700565, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI38679971, Length=708, Percent_Identity=30.225988700565, Blast_Score=286, Evalue=5e-77, Organism=Homo sapiens, GI38679974, Length=708, Percent_Identity=30.225988700565, Blast_Score=286, Evalue=5e-77, Organism=Homo sapiens, GI38679960, Length=708, Percent_Identity=30.225988700565, Blast_Score=286, Evalue=5e-77, Organism=Homo sapiens, GI134142062, Length=506, Percent_Identity=34.1897233201581, Blast_Score=266, Evalue=4e-71, Organism=Escherichia coli, GI1789654, Length=445, Percent_Identity=51.0112359550562, Blast_Score=410, Evalue=1e-115, Organism=Caenorhabditis elegans, GI71987519, Length=670, Percent_Identity=48.955223880597, Blast_Score=581, Evalue=1e-166, Organism=Caenorhabditis elegans, GI17567343, Length=681, Percent_Identity=43.0249632892805, Blast_Score=510, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17562816, Length=449, Percent_Identity=44.097995545657, Blast_Score=360, Evalue=1e-99, Organism=Caenorhabditis elegans, GI133931226, Length=678, Percent_Identity=27.4336283185841, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI71997163, Length=504, Percent_Identity=29.7619047619048, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71997168, Length=504, Percent_Identity=29.7619047619048, Blast_Score=209, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6319685, Length=447, Percent_Identity=44.7427293064877, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6319695, Length=449, Percent_Identity=43.652561247216, Blast_Score=340, Evalue=3e-94, Organism=Saccharomyces cerevisiae, GI6321376, Length=449, Percent_Identity=44.543429844098, Blast_Score=328, Evalue=2e-90, Organism=Saccharomyces cerevisiae, GI6324343, Length=754, Percent_Identity=30.106100795756, Blast_Score=271, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6323863, Length=482, Percent_Identity=34.2323651452282, Blast_Score=250, Evalue=5e-67, Organism=Drosophila melanogaster, GI24651757, Length=675, Percent_Identity=50.6666666666667, Blast_Score=663, Evalue=0.0, Organism=Drosophila melanogaster, GI24651759, Length=640, Percent_Identity=49.375, Blast_Score=608, Evalue=1e-174, Organism=Drosophila melanogaster, GI281363050, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652224, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652222, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652220, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652218, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652212, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652210, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652214, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI19921944, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652216, Length=463, Percent_Identity=44.9244060475162, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI161076409, Length=706, Percent_Identity=30.028328611898, Blast_Score=275, Evalue=9e-74, Organism=Drosophila melanogaster, GI24586458, Length=706, Percent_Identity=30.028328611898, Blast_Score=275, Evalue=1e-73, Organism=Drosophila melanogaster, GI161076407, Length=706, Percent_Identity=30.028328611898, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI24586460, Length=706, Percent_Identity=30.028328611898, Blast_Score=274, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 71535; Mature: 71535
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDTILIANRGEIACRVISTARRLGIRTVAVYSDTDADALHVTMADEAYHIGLAPARESY CCCEEEEECCCCEEEHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCEEEECCCCCHHHH LRGDVILEVAARSGAQAIHPGYGFLSENAEFAEACAKAGVVFIGPPTGAIRAMGSKSAAK HCCCEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHCCCCHHHHH EIMEKAGVPLVPGYHGENQDPEFLGREAKRIGFPVLIKASAGGGGKGMRAVREAVEFPDA HHHHHCCCCCCCCCCCCCCCHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCHH LASAKREAQASFGDDRVLLEKYLTKPRHVEIQVFADTHGNAVHLFERDCSIQRRHQKVLE HHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHH EAPAPGMKPALRKKMGEAAVAAASAIGYVGAGTVEFLLDEDGSFYFMEMNTRLQVEHPVT HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCEEEECCCHH EMITGQDLVEWQLQVAAGAPLPCRQKDLAIGGHAIEARIYAEDPAKDFLPSIGRLAHLRT HHHCCCCCEEEEEEEECCCCCCCCCCCEEECCEEEEEEEEECCCHHHHHHHHHHHHCCCC PAESANVRIDTGVGQGGEVSIYYDPMIAKLIVWDTDRAGALRRLQKALADYQVVGVTTNI CCCCCCEEEECCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHHCCEEEEEEEECC GFLGSVAAHPAFAAADLDTGFIERHRTDLFPDPSLASDRTLALASLDVLLRRAAEAKRTA CCHHHHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH LASADPYSPWHQTSGWRLNFDNHHDLHFLDGEKVVTITVHYRAEGYLLALPGGDLLVRGE HCCCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEEEEEEECCEEEEEECCCCEEEEEC LDAAGDILADLGGARVKATVVRHGATLTIMKGGRSHTLAIHNPYALSGDEEGAGGRLTAP CCCHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCEEECCCCCCCCCEEECC MPGKVVAVMVEPGERVEKGRPLMILEAMKMEHTIAAPRDGLVARLNFTVGSLVSDGAELL CCCCEEEEEECCCHHHHCCCCEEEEEHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCEEE ALADEEGV EEECCCCC >Mature Secondary Structure MFDTILIANRGEIACRVISTARRLGIRTVAVYSDTDADALHVTMADEAYHIGLAPARESY CCCEEEEECCCCEEEHHHHHHHHCCEEEEEEEECCCCCEEEEEEECCEEEECCCCCHHHH LRGDVILEVAARSGAQAIHPGYGFLSENAEFAEACAKAGVVFIGPPTGAIRAMGSKSAAK HCCCEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHCCCCHHHHH EIMEKAGVPLVPGYHGENQDPEFLGREAKRIGFPVLIKASAGGGGKGMRAVREAVEFPDA HHHHHCCCCCCCCCCCCCCCHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCHH LASAKREAQASFGDDRVLLEKYLTKPRHVEIQVFADTHGNAVHLFERDCSIQRRHQKVLE HHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHH EAPAPGMKPALRKKMGEAAVAAASAIGYVGAGTVEFLLDEDGSFYFMEMNTRLQVEHPVT HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCEEEECCCHH EMITGQDLVEWQLQVAAGAPLPCRQKDLAIGGHAIEARIYAEDPAKDFLPSIGRLAHLRT HHHCCCCCEEEEEEEECCCCCCCCCCCEEECCEEEEEEEEECCCHHHHHHHHHHHHCCCC PAESANVRIDTGVGQGGEVSIYYDPMIAKLIVWDTDRAGALRRLQKALADYQVVGVTTNI CCCCCCEEEECCCCCCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHHCCEEEEEEEECC GFLGSVAAHPAFAAADLDTGFIERHRTDLFPDPSLASDRTLALASLDVLLRRAAEAKRTA CCHHHHHCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH LASADPYSPWHQTSGWRLNFDNHHDLHFLDGEKVVTITVHYRAEGYLLALPGGDLLVRGE HCCCCCCCCCCCCCCEEEECCCCCCEEEECCCEEEEEEEEEECCEEEEEECCCCEEEEEC LDAAGDILADLGGARVKATVVRHGATLTIMKGGRSHTLAIHNPYALSGDEEGAGGRLTAP CCCHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCEEECCCCCCCCCEEECC MPGKVVAVMVEPGERVEKGRPLMILEAMKMEHTIAAPRDGLVARLNFTVGSLVSDGAELL CCCCEEEEEECCCHHHHCCCCEEEEEHHHHHHHHCCCCCCEEEEEEEEHHHHHCCCCEEE ALADEEGV EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]