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The map label for this gene is 78224364

Identifier: 78224364

GI number: 78224364

Start: 3569777

End: 3570850

Strand: Reverse

Name: 78224364

Synonym: Gmet_3173

Alternate gene names: NA

Gene position: 3570850-3569777 (Counterclockwise)

Preceding gene: 78224366

Following gene: 78224363

Centisome position: 89.33

GC content: 60.34

Gene sequence:

>1074_bases
ATGGCAAAGAAGCTTTTTATCCCCGGACCGGTTGAGGTCCATCCCGATATCCTTCAGGCAATGGCGACCCCCATGGTCGG
CCACCGGATGGCGGAGTACGCAACTCTCCACGGCAGGGTGACGACGGGGCTCAAAAAGCTCCTCGCAACCGAGGCGAAGG
TTTTTCTCTCGACTTCCAGCGCCTTCGGCGCCATGGAAGGGGCGGTGCGCAACCTGGTGGCAGGGCGCTGCGTCAATTTC
TGCAACGGCGCTTTTTCCGACAAGTGGCACGATGTGACGCGTCGTTGCGGCAAAGAGGCCGATGCGGTCAAGGTGGAATG
GGGAAAGCCGATTACCGCGGAACTGGTTGACGAGGCACTGGCCACGGGAAAATACGACAGCCTTACCCTTATCCACAACG
AAACATCAACCGGCGTCATGTCCCCCCTGCCGGAGATCGCCGCGGTGCTTCGAAAGTACCCTGATGTGGTCTCCATCATC
GACACCGTCTCTTCCATGAGCGCCCTCCCGATTCCGGTGGATGAACTCGGCATCGACTGCTGCATTTTCGGCGTCCAGAA
GGCCTTCGCGCTTCCTCCCGGCCTTGCCGTTTTTACGGCGAGCGAAAAAGCGCTGGCCCGGGCCCGCACCGTCGAGGGGC
GCGGCTACTACTTCGATTTCCTCGAATTCGAGGCAAGCGACGCCAAGAACAATACGCCCTCCACCCCGTGCATTTCGCTG
ATCTACGCCATGGACAAGCAGCTGGAGCGGATGTTCGCCGAGGGGTTCGAACAACGCTGGGCCAGGCATCGGGCCCTGGC
CGACTTCGTGCGGGGCTGGGTGTCGGACCGCGGGTACGGTTTCTTCGCCGAGGAGGCCTACCGTTCCATGACCCTTACCT
GTGCCGTAAACTCCCGTGGCACCGATCTTGCTAGCCTCAAAAAGATGCTTGGCGAGCGGGGCTTCGCCTTTGACGACGGC
TACGGCAAGATCAAGGGGAAGACCTTCCGGATTCCCCATATGGGGGATATGCAGCGTTCCGACCTGGAGGAGTTCCTTGC
TGTGATTGATGAATGCCTCGCCGTACTCGGTTAA

Upstream 100 bases:

>100_bases
TTTGCTAATTTATTAAGCTCTCGATAGCACCGTGAATGGGCGCTTTGCAAGGCCCGTATCCCCCGTATCAGTTTCGATTC
CTTCTTCCCGAGGAGACTTT

Downstream 100 bases:

>100_bases
TGAAATTTTGTGTGACGCCCTGACTTTTTCTCACCTCCTGCTATACTGTGCTGTGGTGAACGAGCCACGCTCTCTGCCTG
CGGGGAGATCCGGCAAAAAG

Product: aminotransferase, class V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAKKLFIPGPVEVHPDILQAMATPMVGHRMAEYATLHGRVTTGLKKLLATEAKVFLSTSSAFGAMEGAVRNLVAGRCVNF
CNGAFSDKWHDVTRRCGKEADAVKVEWGKPITAELVDEALATGKYDSLTLIHNETSTGVMSPLPEIAAVLRKYPDVVSII
DTVSSMSALPIPVDELGIDCCIFGVQKAFALPPGLAVFTASEKALARARTVEGRGYYFDFLEFEASDAKNNTPSTPCISL
IYAMDKQLERMFAEGFEQRWARHRALADFVRGWVSDRGYGFFAEEAYRSMTLTCAVNSRGTDLASLKKMLGERGFAFDDG
YGKIKGKTFRIPHMGDMQRSDLEEFLAVIDECLAVLG

Sequences:

>Translated_357_residues
MAKKLFIPGPVEVHPDILQAMATPMVGHRMAEYATLHGRVTTGLKKLLATEAKVFLSTSSAFGAMEGAVRNLVAGRCVNF
CNGAFSDKWHDVTRRCGKEADAVKVEWGKPITAELVDEALATGKYDSLTLIHNETSTGVMSPLPEIAAVLRKYPDVVSII
DTVSSMSALPIPVDELGIDCCIFGVQKAFALPPGLAVFTASEKALARARTVEGRGYYFDFLEFEASDAKNNTPSTPCISL
IYAMDKQLERMFAEGFEQRWARHRALADFVRGWVSDRGYGFFAEEAYRSMTLTCAVNSRGTDLASLKKMLGERGFAFDDG
YGKIKGKTFRIPHMGDMQRSDLEEFLAVIDECLAVLG
>Mature_356_residues
AKKLFIPGPVEVHPDILQAMATPMVGHRMAEYATLHGRVTTGLKKLLATEAKVFLSTSSAFGAMEGAVRNLVAGRCVNFC
NGAFSDKWHDVTRRCGKEADAVKVEWGKPITAELVDEALATGKYDSLTLIHNETSTGVMSPLPEIAAVLRKYPDVVSIID
TVSSMSALPIPVDELGIDCCIFGVQKAFALPPGLAVFTASEKALARARTVEGRGYYFDFLEFEASDAKNNTPSTPCISLI
YAMDKQLERMFAEGFEQRWARHRALADFVRGWVSDRGYGFFAEEAYRSMTLTCAVNSRGTDLASLKKMLGERGFAFDDGY
GKIKGKTFRIPHMGDMQRSDLEEFLAVIDECLAVLG

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=343, Percent_Identity=26.530612244898, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17536281, Length=363, Percent_Identity=25.068870523416, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6321079, Length=358, Percent_Identity=27.0949720670391, Blast_Score=116, Evalue=6e-27,
Organism=Drosophila melanogaster, GI17530823, Length=367, Percent_Identity=25.6130790190736, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 39137; Mature: 39006

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKLFIPGPVEVHPDILQAMATPMVGHRMAEYATLHGRVTTGLKKLLATEAKVFLSTSS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCH
AFGAMEGAVRNLVAGRCVNFCNGAFSDKWHDVTRRCGKEADAVKVEWGKPITAELVDEAL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
ATGKYDSLTLIHNETSTGVMSPLPEIAAVLRKYPDVVSIIDTVSSMSALPIPVDELGIDC
HCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCHHH
CIFGVQKAFALPPGLAVFTASEKALARARTVEGRGYYFDFLEFEASDAKNNTPSTPCISL
HHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHH
IYAMDKQLERMFAEGFEQRWARHRALADFVRGWVSDRGYGFFAEEAYRSMTLTCAVNSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEEEEEECCCC
TDLASLKKMLGERGFAFDDGYGKIKGKTFRIPHMGDMQRSDLEEFLAVIDECLAVLG
CCHHHHHHHHCCCCCEEECCCCEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKKLFIPGPVEVHPDILQAMATPMVGHRMAEYATLHGRVTTGLKKLLATEAKVFLSTSS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCH
AFGAMEGAVRNLVAGRCVNFCNGAFSDKWHDVTRRCGKEADAVKVEWGKPITAELVDEAL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
ATGKYDSLTLIHNETSTGVMSPLPEIAAVLRKYPDVVSIIDTVSSMSALPIPVDELGIDC
HCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCHHH
CIFGVQKAFALPPGLAVFTASEKALARARTVEGRGYYFDFLEFEASDAKNNTPSTPCISL
HHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHH
IYAMDKQLERMFAEGFEQRWARHRALADFVRGWVSDRGYGFFAEEAYRSMTLTCAVNSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCEEEEEEECCCC
TDLASLKKMLGERGFAFDDGYGKIKGKTFRIPHMGDMQRSDLEEFLAVIDECLAVLG
CCHHHHHHHHCCCCCEEECCCCEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]