Click here to switch to the map view.

The map label for this gene is glgA2

Identifier: 78224366

GI number: 78224366

Start: 3572960

End: 3574414

Strand: Reverse

Name: glgA2

Synonym: Gmet_3175

Alternate gene names: 78224366

Gene position: 3574414-3572960 (Counterclockwise)

Preceding gene: 78224367

Following gene: 78224364

Centisome position: 89.42

GC content: 63.02

Gene sequence:

>1455_bases
ATGAAAATCCTGCAGGTTGCATCCGAGGTTGCCCCCCTTGCCAAGACCGGCGGTCTGGCGGACGTGGTCGCTGCTCTCCC
CAAGGAGCTCCGGCGGATGGGGCACGATGTCCGCGTTGCCATCCCCTTCTACAAGGAGGTGTCGTCGGGGAATCTCCCGG
TGCGCAAGGCCCGTAAGAGTGCGGAGGTGGCGTTGGGGGGGGAGCTCCACAAGGGGTACCTGCGCCAGACTGCCTTGGGG
GAGGTGCCGGTCTACCTGGTTGAAAACCGCGATCTCTTCGGGCGGGACCACCTCTATGGCCCCCCCGAGGGGGACTATCC
CGATAATCCCCTGCGCTTCGCCTTCTTTTGCCGCAGCGTGCTCCAGTTCCTGAAGCGGATGGACTTCCGCCCCGACGTGA
TCCATTGCCACGACTGGCAGTCGGCCCTCATTCCCATCATCCTGAAATACGAACTGGGCCATGACCCGTTCTTCAACCGC
ACGGCAGTCATCTTTACCATCCACAACCTGGCCTACCAGGGGGTGTTCCCCGCTGACGCCCTGGCGCAGACGGGGCTCGA
CCCGTCCCTCTTCTCCGTGGACCGGATTGAATTCTACGGCCGCATCAACCTCCTGAAAGGGGCGATCCTTGCCGCCGACG
CCATCACGACCGTTTCGGAAACCTACTGCCACGAGATACTGAGCCCTGGCCAGGGATGCGGGCTTGAAGGGGTGCTCGAG
CGCCGTCAGGCCGACCTTGCCGGCATCCTCAACGGTCTCGACTCGGAAGAGTGGAACCCATCCCTGGATCGGCGCATTTT
CCGGAACTACTCGTCCAAGTCCCTGGCGGGAAAGGGGGCTGACAAGCGGGAGCTCCAACGGGAACTGGGGCTCAAGGCGG
GAGCGTCGATCCCCATCATCGGCATGGTGGGACGGATTGTGGAGCAGAAGGGGATCGACCTGGTCATCGACCTCCTTCCC
CGGTTTGCCGCCGAAGAGCTGCAGTTGGTGATTCTTGGCACCGGCGACCTCCGCCTCATGCATCAGCTCCATGAATTCAG
GAACAAGGGGGTGAAGAACGTCTCCATCAACCTCGGCTTCAAGGAGCCCCTGGCGCCAAAGATCTATGCCGGATGCGACA
TGTTTCTCATGCCCTCGCGATTCGAGCCCTGCGGCCTGAGCCAGCTCATTGCCCTCAGCTACGGCACGGTGCCGATCGTG
CGAAGGACCGGCGGACTTGCCGACACGGTCATCGATGTCACCGCCAATCCCCGGGAAGGGAACGGCTTCTCCTTCACGGA
GTTCAGTGCCGATGCGTGCTGGGACGCTGTCCAGCGGGCGCTGGCCGCCTACCGGGACCGGGAGGGGTGGCGCAAGATCA
TGCGGCGTGGTATGCTCCGTGACGTTTCCTGGCGCAGTGCCGCCGGCAAGTACGAGGAACTCTATCGCACATGTGCGGAC
AATAGGCGGGGGTAA

Upstream 100 bases:

>100_bases
CCTCGCCGGAAGACGCAGCCACATTCCTTCGGGGGGCTGAGCTGTAGATGCCCGAAGCCTGACGCCACCTATCGACTCTG
AGCCGCTGCGAGGCCCGATA

Downstream 100 bases:

>100_bases
GGAGATGGGTGACGAGCGCAACGAGTTGGACGAATTGAGCAGGGAGATCCGGAAGGTCATCGAGAACAACCGGAAATTTC
TCGACCATGTCATGGATGAG

Product: glycogen/starch synthase, ADP-glucose type

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase 2

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKILQVASEVAPLAKTGGLADVVAALPKELRRMGHDVRVAIPFYKEVSSGNLPVRKARKSAEVALGGELHKGYLRQTALG
EVPVYLVENRDLFGRDHLYGPPEGDYPDNPLRFAFFCRSVLQFLKRMDFRPDVIHCHDWQSALIPIILKYELGHDPFFNR
TAVIFTIHNLAYQGVFPADALAQTGLDPSLFSVDRIEFYGRINLLKGAILAADAITTVSETYCHEILSPGQGCGLEGVLE
RRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLAGKGADKRELQRELGLKAGASIPIIGMVGRIVEQKGIDLVIDLLP
RFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGFKEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIV
RRTGGLADTVIDVTANPREGNGFSFTEFSADACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEELYRTCAD
NRRG

Sequences:

>Translated_484_residues
MKILQVASEVAPLAKTGGLADVVAALPKELRRMGHDVRVAIPFYKEVSSGNLPVRKARKSAEVALGGELHKGYLRQTALG
EVPVYLVENRDLFGRDHLYGPPEGDYPDNPLRFAFFCRSVLQFLKRMDFRPDVIHCHDWQSALIPIILKYELGHDPFFNR
TAVIFTIHNLAYQGVFPADALAQTGLDPSLFSVDRIEFYGRINLLKGAILAADAITTVSETYCHEILSPGQGCGLEGVLE
RRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLAGKGADKRELQRELGLKAGASIPIIGMVGRIVEQKGIDLVIDLLP
RFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGFKEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIV
RRTGGLADTVIDVTANPREGNGFSFTEFSADACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEELYRTCAD
NRRG
>Mature_484_residues
MKILQVASEVAPLAKTGGLADVVAALPKELRRMGHDVRVAIPFYKEVSSGNLPVRKARKSAEVALGGELHKGYLRQTALG
EVPVYLVENRDLFGRDHLYGPPEGDYPDNPLRFAFFCRSVLQFLKRMDFRPDVIHCHDWQSALIPIILKYELGHDPFFNR
TAVIFTIHNLAYQGVFPADALAQTGLDPSLFSVDRIEFYGRINLLKGAILAADAITTVSETYCHEILSPGQGCGLEGVLE
RRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLAGKGADKRELQRELGLKAGASIPIIGMVGRIVEQKGIDLVIDLLP
RFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGFKEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIV
RRTGGLADTVIDVTANPREGNGFSFTEFSADACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEELYRTCAD
NRRG

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=488, Percent_Identity=38.1147540983607, Blast_Score=306, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA2_GEOMG (Q39QT6)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_386113.1
- ProteinModelPortal:   Q39QT6
- SMR:   Q39QT6
- STRING:   Q39QT6
- GeneID:   3741046
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_3175
- NMPDR:   fig|269799.3.peg.2410
- eggNOG:   COG0297
- HOGENOM:   HBG596384
- OMA:   IYLVGHP
- PhylomeDB:   Q39QT6
- ProtClustDB:   CLSK829188
- BioCyc:   GMET269799:GMET_3175-MONOMER
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 53849; Mature: 53849

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILQVASEVAPLAKTGGLADVVAALPKELRRMGHDVRVAIPFYKEVSSGNLPVRKARKS
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCHHHHHCC
AEVALGGELHKGYLRQTALGEVPVYLVENRDLFGRDHLYGPPEGDYPDNPLRFAFFCRSV
CCEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LQFLKRMDFRPDVIHCHDWQSALIPIILKYELGHDPFFNRTAVIFTIHNLAYQGVFPADA
HHHHHHCCCCCCEEEECCCHHHHEEEEEEEECCCCCCCCCEEEEEEEEHHHHCCCCCHHH
LAQTGLDPSLFSVDRIEFYGRINLLKGAILAADAITTVSETYCHEILSPGQGCGLEGVLE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLAGKGADKRELQRELGLKAGASIPII
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHH
GMVGRIVEQKGIDLVIDLLPRFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGF
HHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC
KEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIVRRTGGLADTVIDVTANPREG
CCCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCC
NGFSFTEFSADACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEELYRTCAD
CCCCEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHC
NRRG
CCCC
>Mature Secondary Structure
MKILQVASEVAPLAKTGGLADVVAALPKELRRMGHDVRVAIPFYKEVSSGNLPVRKARKS
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCHHHHHCC
AEVALGGELHKGYLRQTALGEVPVYLVENRDLFGRDHLYGPPEGDYPDNPLRFAFFCRSV
CCEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LQFLKRMDFRPDVIHCHDWQSALIPIILKYELGHDPFFNRTAVIFTIHNLAYQGVFPADA
HHHHHHCCCCCCEEEECCCHHHHEEEEEEEECCCCCCCCCEEEEEEEEHHHHCCCCCHHH
LAQTGLDPSLFSVDRIEFYGRINLLKGAILAADAITTVSETYCHEILSPGQGCGLEGVLE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLAGKGADKRELQRELGLKAGASIPII
HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHH
GMVGRIVEQKGIDLVIDLLPRFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGF
HHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC
KEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIVRRTGGLADTVIDVTANPREG
CCCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCC
NGFSFTEFSADACWDAVQRALAAYRDREGWRKIMRRGMLRDVSWRSAAGKYEELYRTCAD
CCCCEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHC
NRRG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA