Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is glgP [H]

Identifier: 78224350

GI number: 78224350

Start: 3555314

End: 3557878

Strand: Direct

Name: glgP [H]

Synonym: Gmet_3159

Alternate gene names: 78224350

Gene position: 3555314-3557878 (Clockwise)

Preceding gene: 78224349

Following gene: 78224351

Centisome position: 88.94

GC content: 64.91

Gene sequence:

>2565_bases
ATGGACTTCACCAAGGGAATGCACCGTTTTACCGTTGTCCCGTCGCTGACCGGCGAACTGGCCAGACTCCAGACCATCGC
CTACAACCTCTGGTGGACTTGGGAGCCCGAGGCGGTGGAGCTCTTCAAGCGGCTCGACATCGACCTCTGGCAGCAGACCC
GCCACAACCCGGTGGAGATGCTCGGTATCCTCCAGCAGACCACCCTCGACAAGCTCACCACCGACGAGGGATTCATGTCC
CAATTGAAACAGGTGGATGAGAAGTTCCGGGAATACCTCTCGGCCAGGACCTGGTTCGAGCGGACCTGCAACGGCGGCAG
GCCCATGTCCGTCGCTTACTTCTCCATGGAGTTCGGTATCCACGAGTCGCTCCCCACCTATTCGGGGGGACTCGGAATCC
TGGCCGGCGACCACCTGAAGTCGGCCAGCGACCTGGGGATTCCCCTGGTAGGAGTCGGACTCCTCTACCGGCAGGGCTAC
TTCCGCCAGTACCTGAACATTGAGGGGTGGCAGCAGGAACTCTACCCCGAAAACGACTTCTACAACCTCCCCCTCACCCT
GGAGCGGGATGCTTCCGGCGCCCCCCTGGCCGTGGAACTCAACATGCCAAGCCGCAAGGTGACGGCCCACATCTGGCGGG
TTCAGGTGGGGCGGGTCCCCCTCTACCTCCTGGACACGAACCTGGAGGAGAACGCCCCCGAGGACCGGGAGATCACGGCC
CAGCTCTACGGCGGCGACCTGGAGATGCGGATCCGGCAGGAGATCCTCCTGGGGATCGGCGGCATCCGGGCCCTCCACCT
CCTTGGGATCACCCCCAACGTCTGCCACATGAACGAGGGGCACGCGGCGTTTCTGGCCCTGGAGCGGACCCGCCTCCTCA
TGGAAGAGCACGGCATCCGGTTCGCCGAGGCCATGGAGGCGGTGCGGGCCGGCAACGTTTTCACCACCCACACCCCGGTG
GATGCCGGCATCGACCACTTTCCCCCCGATCTCCTAGAGAAGTACCTGGGGCGCTACTACCGCTTCCTGGGCCTCTCCCG
GGACGAGTTCCTGGCCTTGGGACGGATCAACCCCAAGAACTCCCACGAAGCGTTCTGCATGGCGGTCCTGGCCCTCAAGC
TGGCCGACCATGCCAACGGCGTCTCCCAGCTCCATGGCGAGGTGTCGCGGCTCATGTGGAAGAACCTCTGGCCCGAGCTC
CCCGACGAACATATCCCCATCACCTCGGTCACCAACGGAGTCCACACCAAGACCTGGCTCTCCAACGAGATGGCGGGGCT
CCTCACCCGGTACCTCGGCAACCGCTGGCGCGAGGACGCCACCGATCCCCTGCTCTGGAAGCGGGTCGCCCACATCCCCG
AATCGGAGCTCTGGCGGACCCACGAACGGTGCCGCGAGCGGCTCGTCCTCTTCGCCCGCCGCCGCCTCAAGGACCACCTG
AAGCAGGTGGGGGCCACGGCAAAAGAGATCGCCCAGGCCGACGAGGTTCTTGACCCGGAAGCCCTCACCATTGGCTTTGC
CCGCCGCTTCGCCACCTACAAGCGAGGGACCCTTCTCTTCCGGGACCTGGCGCGGCTGGAAAAAATCCTGGGGAGCACCG
ACCGGCCGGTGCAGATCATCTTTGCCGGCAAGGCCCACCCCCACGACACCGAAGGGAAGGAGCTGATCCGGGAGATCTTC
CAGCATTCCCTCGACAGTCGGTTCCGGGGACGGATCGTCTTCATCGAGGACTACGACATGGCCGTGGCCCGGCACCTGGT
CCAGGGGGTCGACGTCTGGCTCAACACCCCCCGCCGCCCCCTGGAGGCCAGCGGCACCAGCGGCATGAAGGTGGCCTTCA
ACGGCGGCCTCAACATGAGCATCCTCGACGGCTGGTGGCCCGAGGGGTACCAGGGGAACAATGGCTGGGCCATCGGCAAA
GGAGAGGTCTACGACGACCTCGATTACCAGAACGAAGTAGAGGGACGGGCCATCTATGACCTGCTGGAGAAAGAAGTGGT
CCCCCTCTTCTACGACCGGGGCCCCGACGGCATCCCCCGCGGCTGGCTCGCCTTCATGAAGGCAAGCCTCCAGACCCTCT
GCCCCCTTTTCAGCACCGAGCGGATGGTTCAGGAGTACACCAGGACCATGTACCGTCCCTCCTTCGCCCACTGGGAGATG
CTCTCGGCGGACGGCCTGGCCCTGGCAGTGGATCTCGCCGGCTGGAAGGGGGATATCCGCCGCACCTGGCACCAGGTAAG
GATTGCGGGGATCGAAGCCAAGACCCCCACCGAGGTCCCGTTGGGGGCGGTAATTCCGGTGACGGTGAACATTATCCTCG
GCGACATCCCCCCCGACCAGCTTTCCGCGGATCTCTACTGCGGGGTCCTGGACTCCCGAGGGAACATCGTCGGAGGAGAA
CTGGTTCCCCTTGCCTGGGAAGAAGCGACAGGGGACGGTGCCCACCGCTTCTACGGCGAGATCGAGAGCCGCTTCTGCGG
CAGGCACGGCTTCATGGTGCGGGTCATGCCCCGCCACCCGAAGCTGGGGCCGGTCTACGAGCAGGGAAGTATTGCGTGGG
GGTGA

Upstream 100 bases:

>100_bases
CATACGAAAACGCCATCAACCAGTCAAATACGGAGGATGCAACGACCGACCGTGGATCAAGGGTTTTCCCGGTCCCCGGT
CCCCGGTCCCGGAGGTTTCA

Downstream 100 bases:

>100_bases
AGACCGGGACCGGGGATCGGGGATCGGAAACATCCCGGTCGCGCAGCCTGGGGTCTCTCCCTTCAAGTTTCTGCCGTTTC
GGCCGATACGTATGACATGA

Product: Alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLDKLTTDEGFMS
QLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGIHESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGY
FRQYLNIEGWQQELYPENDFYNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA
QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIRFAEAMEAVRAGNVFTTHTPV
DAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKNSHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPEL
PDEHIPITSVTNGVHTKTWLSNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL
KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQIIFAGKAHPHDTEGKELIREIF
QHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRPLEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGK
GEVYDDLDYQNEVEGRAIYDLLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM
LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQLSADLYCGVLDSRGNIVGGE
LVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHPKLGPVYEQGSIAWG

Sequences:

>Translated_854_residues
MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLDKLTTDEGFMS
QLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGIHESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGY
FRQYLNIEGWQQELYPENDFYNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA
QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIRFAEAMEAVRAGNVFTTHTPV
DAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKNSHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPEL
PDEHIPITSVTNGVHTKTWLSNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL
KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQIIFAGKAHPHDTEGKELIREIF
QHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRPLEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGK
GEVYDDLDYQNEVEGRAIYDLLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM
LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQLSADLYCGVLDSRGNIVGGE
LVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHPKLGPVYEQGSIAWG
>Mature_854_residues
MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLDKLTTDEGFMS
QLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGIHESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGY
FRQYLNIEGWQQELYPENDFYNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA
QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIRFAEAMEAVRAGNVFTTHTPV
DAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKNSHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPEL
PDEHIPITSVTNGVHTKTWLSNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL
KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQIIFAGKAHPHDTEGKELIREIF
QHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRPLEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGK
GEVYDDLDYQNEVEGRAIYDLLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM
LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQLSADLYCGVLDSRGNIVGGE
LVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHPKLGPVYEQGSIAWG

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI2367228, Length=440, Percent_Identity=27.9545454545455, Blast_Score=111, Evalue=2e-25,
Organism=Escherichia coli, GI48994936, Length=577, Percent_Identity=23.3968804159445, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI78706832, Length=453, Percent_Identity=20.9713024282561, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581010, Length=453, Percent_Identity=20.9713024282561, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011834
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 96964; Mature: 96964

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEM
CCCCCCCCEEEECCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHCHHHHHHCCCCHHHH
LGILQQTTLDKLTTDEGFMSQLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
HESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGYFRQYLNIEGWQQELYPENDF
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
YNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA
EECCEEEECCCCCCCEEEEECCCCHHHEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEE
QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIR
EEECCCHHHHHHHHHHHHCCCHHHHHEECCCCCCEECCCCCEEEEHHHHHHHHHHHCCCH
FAEAMEAVRAGNVFTTHTPVDAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKN
HHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCC
SHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPELPDEHIPITSVTNGVHTKTWL
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
SNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQII
HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE
FAGKAHPHDTEGKELIREIFQHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRP
EECCCCCCCCCHHHHHHHHHHHHHCHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
LEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGKGEVYDDLDYQNEVEGRAIYD
CCCCCCCCEEEEEECCCCEEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHHHH
LLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM
HHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQ
ECCCCEEEEEEECCCCCHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCHHH
LSADLYCGVLDSRGNIVGGELVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHP
HCCCEEEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
KLGPVYEQGSIAWG
CCCCCCCCCCCCCC
>Mature Secondary Structure
MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEM
CCCCCCCCEEEECCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHCHHHHHHCCCCHHHH
LGILQQTTLDKLTTDEGFMSQLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
HESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGYFRQYLNIEGWQQELYPENDF
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
YNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA
EECCEEEECCCCCCCEEEEECCCCHHHEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEE
QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIR
EEECCCHHHHHHHHHHHHCCCHHHHHEECCCCCCEECCCCCEEEEHHHHHHHHHHHCCCH
FAEAMEAVRAGNVFTTHTPVDAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKN
HHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCC
SHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPELPDEHIPITSVTNGVHTKTWL
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
SNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQII
HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE
FAGKAHPHDTEGKELIREIFQHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRP
EECCCCCCCCCHHHHHHHHHHHHHCHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
LEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGKGEVYDDLDYQNEVEGRAIYD
CCCCCCCCEEEEEECCCCEEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHHHH
LLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM
HHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQ
ECCCCEEEEEEECCCCCHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCHHH
LSADLYCGVLDSRGNIVGGELVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHP
HCCCEEEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC
KLGPVYEQGSIAWG
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]