| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is glgP [H]
Identifier: 78224350
GI number: 78224350
Start: 3555314
End: 3557878
Strand: Direct
Name: glgP [H]
Synonym: Gmet_3159
Alternate gene names: 78224350
Gene position: 3555314-3557878 (Clockwise)
Preceding gene: 78224349
Following gene: 78224351
Centisome position: 88.94
GC content: 64.91
Gene sequence:
>2565_bases ATGGACTTCACCAAGGGAATGCACCGTTTTACCGTTGTCCCGTCGCTGACCGGCGAACTGGCCAGACTCCAGACCATCGC CTACAACCTCTGGTGGACTTGGGAGCCCGAGGCGGTGGAGCTCTTCAAGCGGCTCGACATCGACCTCTGGCAGCAGACCC GCCACAACCCGGTGGAGATGCTCGGTATCCTCCAGCAGACCACCCTCGACAAGCTCACCACCGACGAGGGATTCATGTCC CAATTGAAACAGGTGGATGAGAAGTTCCGGGAATACCTCTCGGCCAGGACCTGGTTCGAGCGGACCTGCAACGGCGGCAG GCCCATGTCCGTCGCTTACTTCTCCATGGAGTTCGGTATCCACGAGTCGCTCCCCACCTATTCGGGGGGACTCGGAATCC TGGCCGGCGACCACCTGAAGTCGGCCAGCGACCTGGGGATTCCCCTGGTAGGAGTCGGACTCCTCTACCGGCAGGGCTAC TTCCGCCAGTACCTGAACATTGAGGGGTGGCAGCAGGAACTCTACCCCGAAAACGACTTCTACAACCTCCCCCTCACCCT GGAGCGGGATGCTTCCGGCGCCCCCCTGGCCGTGGAACTCAACATGCCAAGCCGCAAGGTGACGGCCCACATCTGGCGGG TTCAGGTGGGGCGGGTCCCCCTCTACCTCCTGGACACGAACCTGGAGGAGAACGCCCCCGAGGACCGGGAGATCACGGCC CAGCTCTACGGCGGCGACCTGGAGATGCGGATCCGGCAGGAGATCCTCCTGGGGATCGGCGGCATCCGGGCCCTCCACCT CCTTGGGATCACCCCCAACGTCTGCCACATGAACGAGGGGCACGCGGCGTTTCTGGCCCTGGAGCGGACCCGCCTCCTCA TGGAAGAGCACGGCATCCGGTTCGCCGAGGCCATGGAGGCGGTGCGGGCCGGCAACGTTTTCACCACCCACACCCCGGTG GATGCCGGCATCGACCACTTTCCCCCCGATCTCCTAGAGAAGTACCTGGGGCGCTACTACCGCTTCCTGGGCCTCTCCCG GGACGAGTTCCTGGCCTTGGGACGGATCAACCCCAAGAACTCCCACGAAGCGTTCTGCATGGCGGTCCTGGCCCTCAAGC TGGCCGACCATGCCAACGGCGTCTCCCAGCTCCATGGCGAGGTGTCGCGGCTCATGTGGAAGAACCTCTGGCCCGAGCTC CCCGACGAACATATCCCCATCACCTCGGTCACCAACGGAGTCCACACCAAGACCTGGCTCTCCAACGAGATGGCGGGGCT CCTCACCCGGTACCTCGGCAACCGCTGGCGCGAGGACGCCACCGATCCCCTGCTCTGGAAGCGGGTCGCCCACATCCCCG AATCGGAGCTCTGGCGGACCCACGAACGGTGCCGCGAGCGGCTCGTCCTCTTCGCCCGCCGCCGCCTCAAGGACCACCTG AAGCAGGTGGGGGCCACGGCAAAAGAGATCGCCCAGGCCGACGAGGTTCTTGACCCGGAAGCCCTCACCATTGGCTTTGC CCGCCGCTTCGCCACCTACAAGCGAGGGACCCTTCTCTTCCGGGACCTGGCGCGGCTGGAAAAAATCCTGGGGAGCACCG ACCGGCCGGTGCAGATCATCTTTGCCGGCAAGGCCCACCCCCACGACACCGAAGGGAAGGAGCTGATCCGGGAGATCTTC CAGCATTCCCTCGACAGTCGGTTCCGGGGACGGATCGTCTTCATCGAGGACTACGACATGGCCGTGGCCCGGCACCTGGT CCAGGGGGTCGACGTCTGGCTCAACACCCCCCGCCGCCCCCTGGAGGCCAGCGGCACCAGCGGCATGAAGGTGGCCTTCA ACGGCGGCCTCAACATGAGCATCCTCGACGGCTGGTGGCCCGAGGGGTACCAGGGGAACAATGGCTGGGCCATCGGCAAA GGAGAGGTCTACGACGACCTCGATTACCAGAACGAAGTAGAGGGACGGGCCATCTATGACCTGCTGGAGAAAGAAGTGGT CCCCCTCTTCTACGACCGGGGCCCCGACGGCATCCCCCGCGGCTGGCTCGCCTTCATGAAGGCAAGCCTCCAGACCCTCT GCCCCCTTTTCAGCACCGAGCGGATGGTTCAGGAGTACACCAGGACCATGTACCGTCCCTCCTTCGCCCACTGGGAGATG CTCTCGGCGGACGGCCTGGCCCTGGCAGTGGATCTCGCCGGCTGGAAGGGGGATATCCGCCGCACCTGGCACCAGGTAAG GATTGCGGGGATCGAAGCCAAGACCCCCACCGAGGTCCCGTTGGGGGCGGTAATTCCGGTGACGGTGAACATTATCCTCG GCGACATCCCCCCCGACCAGCTTTCCGCGGATCTCTACTGCGGGGTCCTGGACTCCCGAGGGAACATCGTCGGAGGAGAA CTGGTTCCCCTTGCCTGGGAAGAAGCGACAGGGGACGGTGCCCACCGCTTCTACGGCGAGATCGAGAGCCGCTTCTGCGG CAGGCACGGCTTCATGGTGCGGGTCATGCCCCGCCACCCGAAGCTGGGGCCGGTCTACGAGCAGGGAAGTATTGCGTGGG GGTGA
Upstream 100 bases:
>100_bases CATACGAAAACGCCATCAACCAGTCAAATACGGAGGATGCAACGACCGACCGTGGATCAAGGGTTTTCCCGGTCCCCGGT CCCCGGTCCCGGAGGTTTCA
Downstream 100 bases:
>100_bases AGACCGGGACCGGGGATCGGGGATCGGAAACATCCCGGTCGCGCAGCCTGGGGTCTCTCCCTTCAAGTTTCTGCCGTTTC GGCCGATACGTATGACATGA
Product: Alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLDKLTTDEGFMS QLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGIHESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGY FRQYLNIEGWQQELYPENDFYNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIRFAEAMEAVRAGNVFTTHTPV DAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKNSHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPEL PDEHIPITSVTNGVHTKTWLSNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQIIFAGKAHPHDTEGKELIREIF QHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRPLEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGK GEVYDDLDYQNEVEGRAIYDLLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQLSADLYCGVLDSRGNIVGGE LVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHPKLGPVYEQGSIAWG
Sequences:
>Translated_854_residues MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLDKLTTDEGFMS QLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGIHESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGY FRQYLNIEGWQQELYPENDFYNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIRFAEAMEAVRAGNVFTTHTPV DAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKNSHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPEL PDEHIPITSVTNGVHTKTWLSNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQIIFAGKAHPHDTEGKELIREIF QHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRPLEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGK GEVYDDLDYQNEVEGRAIYDLLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQLSADLYCGVLDSRGNIVGGE LVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHPKLGPVYEQGSIAWG >Mature_854_residues MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEMLGILQQTTLDKLTTDEGFMS QLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGIHESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGY FRQYLNIEGWQQELYPENDFYNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIRFAEAMEAVRAGNVFTTHTPV DAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKNSHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPEL PDEHIPITSVTNGVHTKTWLSNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQIIFAGKAHPHDTEGKELIREIF QHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRPLEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGK GEVYDDLDYQNEVEGRAIYDLLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQLSADLYCGVLDSRGNIVGGE LVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHPKLGPVYEQGSIAWG
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI2367228, Length=440, Percent_Identity=27.9545454545455, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI48994936, Length=577, Percent_Identity=23.3968804159445, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI78706832, Length=453, Percent_Identity=20.9713024282561, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581010, Length=453, Percent_Identity=20.9713024282561, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96964; Mature: 96964
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEM CCCCCCCCEEEECCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHCHHHHHHCCCCHHHH LGILQQTTLDKLTTDEGFMSQLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC HESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGYFRQYLNIEGWQQELYPENDF CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC YNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA EECCEEEECCCCCCCEEEEECCCCHHHEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEE QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIR EEECCCHHHHHHHHHHHHCCCHHHHHEECCCCCCEECCCCCEEEEHHHHHHHHHHHCCCH FAEAMEAVRAGNVFTTHTPVDAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKN HHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCC SHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPELPDEHIPITSVTNGVHTKTWL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH SNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQII HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE FAGKAHPHDTEGKELIREIFQHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRP EECCCCCCCCCHHHHHHHHHHHHHCHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCC LEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGKGEVYDDLDYQNEVEGRAIYD CCCCCCCCEEEEEECCCCEEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHHHH LLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM HHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQ ECCCCEEEEEEECCCCCHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCHHH LSADLYCGVLDSRGNIVGGELVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHP HCCCEEEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC KLGPVYEQGSIAWG CCCCCCCCCCCCCC >Mature Secondary Structure MDFTKGMHRFTVVPSLTGELARLQTIAYNLWWTWEPEAVELFKRLDIDLWQQTRHNPVEM CCCCCCCCEEEECCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHCHHHHHHCCCCHHHH LGILQQTTLDKLTTDEGFMSQLKQVDEKFREYLSARTWFERTCNGGRPMSVAYFSMEFGI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC HESLPTYSGGLGILAGDHLKSASDLGIPLVGVGLLYRQGYFRQYLNIEGWQQELYPENDF CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC YNLPLTLERDASGAPLAVELNMPSRKVTAHIWRVQVGRVPLYLLDTNLEENAPEDREITA EECCEEEECCCCCCCEEEEECCCCHHHEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEE QLYGGDLEMRIRQEILLGIGGIRALHLLGITPNVCHMNEGHAAFLALERTRLLMEEHGIR EEECCCHHHHHHHHHHHHCCCHHHHHEECCCCCCEECCCCCEEEEHHHHHHHHHHHCCCH FAEAMEAVRAGNVFTTHTPVDAGIDHFPPDLLEKYLGRYYRFLGLSRDEFLALGRINPKN HHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCC SHEAFCMAVLALKLADHANGVSQLHGEVSRLMWKNLWPELPDEHIPITSVTNGVHTKTWL CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH SNEMAGLLTRYLGNRWREDATDPLLWKRVAHIPESELWRTHERCRERLVLFARRRLKDHL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVGATAKEIAQADEVLDPEALTIGFARRFATYKRGTLLFRDLARLEKILGSTDRPVQII HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE FAGKAHPHDTEGKELIREIFQHSLDSRFRGRIVFIEDYDMAVARHLVQGVDVWLNTPRRP EECCCCCCCCCHHHHHHHHHHHHHCHHHCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCC LEASGTSGMKVAFNGGLNMSILDGWWPEGYQGNNGWAIGKGEVYDDLDYQNEVEGRAIYD CCCCCCCCEEEEEECCCCEEEECCCCCCCEECCCCEEECCCCCCCCCCCCCCCCHHHHHH LLEKEVVPLFYDRGPDGIPRGWLAFMKASLQTLCPLFSTERMVQEYTRTMYRPSFAHWEM HHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHE LSADGLALAVDLAGWKGDIRRTWHQVRIAGIEAKTPTEVPLGAVIPVTVNIILGDIPPDQ ECCCCEEEEEEECCCCCHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEEEEEECCCCHHH LSADLYCGVLDSRGNIVGGELVPLAWEEATGDGAHRFYGEIESRFCGRHGFMVRVMPRHP HCCCEEEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCC KLGPVYEQGSIAWG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]