Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is 78224351

Identifier: 78224351

GI number: 78224351

Start: 3557975

End: 3559693

Strand: Direct

Name: 78224351

Synonym: Gmet_3160

Alternate gene names: NA

Gene position: 3557975-3559693 (Clockwise)

Preceding gene: 78224350

Following gene: 78224352

Centisome position: 89.01

GC content: 68.35

Gene sequence:

>1719_bases
ATGATCATCACCCAGGACATAGCCCGGATCGCCCAGGCCCTCCTCAAAGACACCACCGGTTCCCTGGTGGAGGCCACCTG
GCAGTCCCTTACCCCCCTTAACCTCACGCCGGGACAGATGGTCCACGGCGAGGTCATGGCGAACTTCGCCAACAGCCGCT
ACCTGGTGAGAATCGCCAACGAGCTCCTCCACATGGAGCTTCCCCTCAACCTCCAGCCGGGCCAGGCAGTGGAGCTCACC
TACGTCACCGACGAGCCCCGGCTGGTCTTTTCCCTGTCGAAGTCGGGCAATTCCGCGACGCCCGTCCAGATCAGCGACAC
AGGGCGCTGGCTCAACACCCTGGCCCAGGGGACCGGCGGCACACAGGCCGCGAGCTCTCTCCCCCGCCCTTCCCTCGTAA
TCTCGGGCCCTCCCCGGGACCCGGCCCTCCTGGCCGAGGGGTTGAAGAACGTCCTCAGCCGGAGCGGAGTCTTCTACGAA
TCCCACCTGGCCCAGTGGGTGCAGGGGGAATATCCCCTTACCGACCTCCTCCGGGAGCCCCAGGGGCAACTCTCCCCCCT
TGCCGGCCGGCTCCCGGCCGAGGGAAACGGGGCAACCACGACACTTCATGGCGTCCGGGTTTCTCCTGGCGAGACGCCAC
CGGCGCCGGCGCCTCCAGCTGTGACGCCAGGACTACCTCTCGAGGAAGGCGTCACTCCACCCCCCCCACGAACCATCGCG
GAGGGGAGTCCGTCCGCACCAGGGAACGCCGCCCCCGACGCGGCACCCCGGCAGGGGGAAACTCCGCCCTCTCCCGACAC
CCCGAAAGGGGGCCAGACGACCTCAGCAGCGCCCCGAGACCCCCTTCCCCAAACGGCTATTTCGCCCCAGAACCAGCCCC
AGGCCCCGGGACGGCCAGGAGCGCCTGCACCTCTCCCTGCGGAGCCTCAGGGAGGCGTGGCCACGACCTCACCAGACCCC
GAGACCGTCGACGCACCGCCGGCCGCCCCGCAAAACGCAGCGGCACCGACCGGAGCCCCCCTGCCAAAATCTGTTGGTGA
GGTTCCCGGTCAACAGCTTGCAACGACGGTTCTCCAGGGGGGGCAGCCACCTCAACCGCGGGACACCGTTGTCCCGAACC
CTACGGAATTCGGGCACCCCGCCCCGGCATCATCACCGGACGCACGCCCCCAGACAGAAGGCCACCCACAGTCCCTCCTT
AGGGACGGAGCAGCAGCCACATCCCCCGGCAGGGCGTCCTCTCCTCCCCCCCTCCCCGGAACGCCGGAGGGAGGAGCACG
AGTTGTAATTCCCGGAGAGACCGCGCCAACCAGCCGGGGCGCAATGGGCCGGCTGGGGGAGCCACCGCCTCCCGCAGGCA
TTGAGTCCCAGACCATCCCCATCATCAAGGAGCAGCTCACCACCCTCACCACCGGCGTCTTCACCTGGTTCGGCCAGGCC
TGGCCCGGCCAGGACATGGAATGGAAGGTGGAGGAGCGGGAGGCGGAAGGGGGTAAGGGGGAGCGGTCGTGGCTGACCGA
GGTGGCCGTGGAGTTGCCAAGCCTGGGGGCTGTCCGGGCAACCCTCCGTGCGGGAAAGGAGGGGATCGGTGTGACCCTGG
TTGCGGAAGACGGACGGACGGCGGAGATTCTTGCGGCAGGGCAGAATGGCCTTGATGAGCGGTTCGACGCCGCAGGGCTG
CGGCTCGGCGGTTTTACGGTGAGAGATGGATCACAGTGA

Upstream 100 bases:

>100_bases
GTGAAGACCGGGACCGGGGATCGGGGATCGGAAACATCCCGGTCGCGCAGCCTGGGGTCTCTCCCTTCAAGTTTCTGCCG
TTTCGGCCGATACGTATGAC

Downstream 100 bases:

>100_bases
GCGGGAAAAAAAGGCGGTGGCCCTCTCCTACCGGGAGGGGCAGTATGCGCCGCAGGTGGTGGCAAAGGGGCACGGTGTGA
CCGCCGAGGCGATCATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIANELLHMELPLNLQPGQAVELT
YVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGGTQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYE
SHLAQWVQGEYPLTDLLREPQGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA
EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPGAPAPLPAEPQGGVATTSPDP
ETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQGGQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLL
RDGAAATSPGRASSPPPLPGTPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA
WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRTAEILAAGQNGLDERFDAAGL
RLGGFTVRDGSQ

Sequences:

>Translated_572_residues
MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIANELLHMELPLNLQPGQAVELT
YVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGGTQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYE
SHLAQWVQGEYPLTDLLREPQGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA
EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPGAPAPLPAEPQGGVATTSPDP
ETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQGGQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLL
RDGAAATSPGRASSPPPLPGTPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA
WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRTAEILAAGQNGLDERFDAAGL
RLGGFTVRDGSQ
>Mature_572_residues
MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIANELLHMELPLNLQPGQAVELT
YVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGGTQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYE
SHLAQWVQGEYPLTDLLREPQGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA
EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPGAPAPLPAEPQGGVATTSPDP
ETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQGGQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLL
RDGAAATSPGRASSPPPLPGTPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA
WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRTAEILAAGQNGLDERFDAAGL
RLGGFTVRDGSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58943; Mature: 58943

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIAN
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHH
ELLHMELPLNLQPGQAVELTYVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGG
HHHEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHCCCCC
TQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYESHLAQWVQGEYPLTDLLREP
CHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCC
QGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA
CCCCCCHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAPLPAEPQGGVATTSPDPETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQG
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC
GQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLLRDGAAATSPGRASSPPPLPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
TPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRT
CCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCE
AEILAAGQNGLDERFDAAGLRLGGFTVRDGSQ
EEEEECCCCCHHHHHHHCCEEECCEEECCCCC
>Mature Secondary Structure
MIITQDIARIAQALLKDTTGSLVEATWQSLTPLNLTPGQMVHGEVMANFANSRYLVRIAN
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHH
ELLHMELPLNLQPGQAVELTYVTDEPRLVFSLSKSGNSATPVQISDTGRWLNTLAQGTGG
HHHEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHCCCCC
TQAASSLPRPSLVISGPPRDPALLAEGLKNVLSRSGVFYESHLAQWVQGEYPLTDLLREP
CHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCC
QGQLSPLAGRLPAEGNGATTTLHGVRVSPGETPPAPAPPAVTPGLPLEEGVTPPPPRTIA
CCCCCCHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
EGSPSAPGNAAPDAAPRQGETPPSPDTPKGGQTTSAAPRDPLPQTAISPQNQPQAPGRPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAPLPAEPQGGVATTSPDPETVDAPPAAPQNAAAPTGAPLPKSVGEVPGQQLATTVLQG
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC
GQPPQPRDTVVPNPTEFGHPAPASSPDARPQTEGHPQSLLRDGAAATSPGRASSPPPLPG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
TPEGGARVVIPGETAPTSRGAMGRLGEPPPPAGIESQTIPIIKEQLTTLTTGVFTWFGQA
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
WPGQDMEWKVEEREAEGGKGERSWLTEVAVELPSLGAVRATLRAGKEGIGVTLVAEDGRT
CCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCE
AEILAAGQNGLDERFDAAGLRLGGFTVRDGSQ
EEEEECCCCCHHHHHHHCCEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA