| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224326
Identifier: 78224326
GI number: 78224326
Start: 3531498
End: 3532037
Strand: Direct
Name: 78224326
Synonym: Gmet_3135
Alternate gene names: NA
Gene position: 3531498-3532037 (Clockwise)
Preceding gene: 78224325
Following gene: 78224328
Centisome position: 88.34
GC content: 38.89
Gene sequence:
>540_bases ATGAACATTGAATCTACATATTCATATACATACCAAGACCAGCTCCACAAGAGCTATAAGGACTTTATAATGCAGTGCGC ACCGTTTTCGTACTTTATAACGCTAACGTTCAGAAATCGGCAATCCGAAGACGAAAGCAAGCGGCAGATAAACTTTCTGC TTCATTTGCTTAAACAAAAGGTATTGGGAAGGAAATCAGACGGAGAGTATTTGAACGGATTTTGTGCTTTTGAAAAACAT CGCTCTTTTGCAAACAATGAACTGCACTGTCATATTCTTTTATGTTCTCATGACAAACTGGACTGTGAGGGCAAAAAGCC CTTTTCTGAGCACTTTTATGAGTGCTTGGGGAAGGTCAATGTTCAGTACGGGGTGCTTCATGGAAAGGACATTCCGCAGG TCAAAGCCTTTGCCAAAAATTGTTGTGATATTACTGTAATTTATGACTTGGATGGTCTAGTTAGCTATTTCACAAAGACC TTTGAAAGGAATTTGAACTTAGATGCTTTTCAACCAATAGGCAAGTATGGAATACAATAG
Upstream 100 bases:
>100_bases AAATGAACAACGCAGATCACTCCATCAGCAATGCTATGGGGCACTGCAACTAAACATTGAAAAATCACTATATCTACTTG ATGGGAAAGGTGCATCTAAA
Downstream 100 bases:
>100_bases GAGAAGGATATGCTAAAGCCTTATCGACAATCTCTTTATCATTGCAAGAAAACAGGGACCAACAAACAGCGCCTCAGTAT TTATGTCCCAGAAGACACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNIESTYSYTYQDQLHKSYKDFIMQCAPFSYFITLTFRNRQSEDESKRQINFLLHLLKQKVLGRKSDGEYLNGFCAFEKH RSFANNELHCHILLCSHDKLDCEGKKPFSEHFYECLGKVNVQYGVLHGKDIPQVKAFAKNCCDITVIYDLDGLVSYFTKT FERNLNLDAFQPIGKYGIQ
Sequences:
>Translated_179_residues MNIESTYSYTYQDQLHKSYKDFIMQCAPFSYFITLTFRNRQSEDESKRQINFLLHLLKQKVLGRKSDGEYLNGFCAFEKH RSFANNELHCHILLCSHDKLDCEGKKPFSEHFYECLGKVNVQYGVLHGKDIPQVKAFAKNCCDITVIYDLDGLVSYFTKT FERNLNLDAFQPIGKYGIQ >Mature_179_residues MNIESTYSYTYQDQLHKSYKDFIMQCAPFSYFITLTFRNRQSEDESKRQINFLLHLLKQKVLGRKSDGEYLNGFCAFEKH RSFANNELHCHILLCSHDKLDCEGKKPFSEHFYECLGKVNVQYGVLHGKDIPQVKAFAKNCCDITVIYDLDGLVSYFTKT FERNLNLDAFQPIGKYGIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20939; Mature: 20939
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIESTYSYTYQDQLHKSYKDFIMQCAPFSYFITLTFRNRQSEDESKRQINFLLHLLKQK CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH VLGRKSDGEYLNGFCAFEKHRSFANNELHCHILLCSHDKLDCEGKKPFSEHFYECLGKVN HCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC VQYGVLHGKDIPQVKAFAKNCCDITVIYDLDGLVSYFTKTFERNLNLDAFQPIGKYGIQ CEEEEEECCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHCCCC >Mature Secondary Structure MNIESTYSYTYQDQLHKSYKDFIMQCAPFSYFITLTFRNRQSEDESKRQINFLLHLLKQK CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH VLGRKSDGEYLNGFCAFEKHRSFANNELHCHILLCSHDKLDCEGKKPFSEHFYECLGKVN HCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC VQYGVLHGKDIPQVKAFAKNCCDITVIYDLDGLVSYFTKTFERNLNLDAFQPIGKYGIQ CEEEEEECCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA