| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78224244
Identifier: 78224244
GI number: 78224244
Start: 3445091
End: 3446341
Strand: Direct
Name: 78224244
Synonym: Gmet_3051
Alternate gene names: NA
Gene position: 3445091-3446341 (Clockwise)
Preceding gene: 78224243
Following gene: 78224250
Centisome position: 86.18
GC content: 43.73
Gene sequence:
>1251_bases GTGCCTAAATGTACTGCACAAGAAATAATTAAAGAGATTTCAGAAGTTCAAAGCATTTCATTGCCTAATGACTGGTTTGA TAATTTGAGTGACAAGCAATCTGTTTTTTCATCGCTGTATCAATGGATGACTGATAGTGGCAGAGTCCCTTCTGATCAGC TTACAACGTTACACAATAGAACTTATGTGGGAGAAAAGACATACAGCAAATTGCTTACGTTTGAAAGGAAACGGCTCGCC AAAACCCTTAAACTGCGTGGCGAAAAGCTTGAAGAGGCTGTTGCGTGGTCAGATATGAACTCTGGCCCGAAAAGCGAAAT TGGCCAATCTCCCATTGCTGGCGATGTCATTCTGGTAATTCCTGAGTCTAGCAGGAAAGCGCTGAATGATTTTTCCATCC GGTTTCGTAATGAAAACTGGTTGGCTGCAGTCAAGAAAGTTAAGAATCATGCTGCAGGAGCAACATACTACCAATGGCTG GTTTCTCAGGTGGAGCGACCTGATCACATAGGAGATACCGCAAAAGATGCGGCTATTGACGATACATATCCGCGTGAAAG CAATGATTATGGTGAATTGATCACGTATCTGACTGCAAACGTATCCCATGCAGCTCTTGAATGCTTCAAGGATGGTTGGC TGGAATATATTCAGCAATACCCTGAAAGGATAAAACCTGCTGCATGGTGTGATGAATGTGGGCAAAAATTGAATATCGAG GATGCATTGATTGCCTGGAGCAAGGAAGACCAGAACGAAGTATTTATCCTTGATGCTGACTGCCGTGCAAAATTCGATGA ATTTGATCCCATGGAATCGCGGCCACTTCCAGGAATTACCGGTGCTGACCTTGAGGAATTGGCAACAAAAGTAGGCTTGA GTGAACTCGACATAGAAAAGCTTGAAGAGAAACTGAAGCTATGGGCTGTTATTCCGGCATCAGGCAACTCTGGATGGGTA TATTTCATAAAATCTGAAAGCAGTCATGAAATCAAGATCGGATATACCGCTGGCCCTATTGAAAAGCGGATAACCTCCCT TCAAACCGCCCATTCAAGCAATCTGCGTGTACTCGCTACTGTTCCTGGAACACGTGAATATGAAAAAGAACTCCACCGGA AGTTTGCAGATCACCGCCTCAAGGGTGAGTGGTTTGCTCCTCATCATGATCTGGTGTCATTTATTGCTGTACTCAAAGAT AATGATTCTAGAGCAACATTAGTAGACCCGACTAACCAAACAGGACACTAG
Upstream 100 bases:
>100_bases GGTTATGATCAGGGATGGGAAGTTGGTTGCGTATAAAAGCAAAAATGACCGGTTAAAGCTTGGGTGGCAATTTGCTACTG AGTCTTAAATTGGAGCTACT
Downstream 100 bases:
>100_bases TGATATATTATTTCTTTTTCCCTATCTTTTTTGCTGGGGCGCCTTTACACAGATTCTCGTGAATGCTCGCACCGATTGAA TTGGGAATAATATTGCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPKCTAQEIIKEISEVQSISLPNDWFDNLSDKQSVFSSLYQWMTDSGRVPSDQLTTLHNRTYVGEKTYSKLLTFERKRLA KTLKLRGEKLEEAVAWSDMNSGPKSEIGQSPIAGDVILVIPESSRKALNDFSIRFRNENWLAAVKKVKNHAAGATYYQWL VSQVERPDHIGDTAKDAAIDDTYPRESNDYGELITYLTANVSHAALECFKDGWLEYIQQYPERIKPAAWCDECGQKLNIE DALIAWSKEDQNEVFILDADCRAKFDEFDPMESRPLPGITGADLEELATKVGLSELDIEKLEEKLKLWAVIPASGNSGWV YFIKSESSHEIKIGYTAGPIEKRITSLQTAHSSNLRVLATVPGTREYEKELHRKFADHRLKGEWFAPHHDLVSFIAVLKD NDSRATLVDPTNQTGH
Sequences:
>Translated_416_residues MPKCTAQEIIKEISEVQSISLPNDWFDNLSDKQSVFSSLYQWMTDSGRVPSDQLTTLHNRTYVGEKTYSKLLTFERKRLA KTLKLRGEKLEEAVAWSDMNSGPKSEIGQSPIAGDVILVIPESSRKALNDFSIRFRNENWLAAVKKVKNHAAGATYYQWL VSQVERPDHIGDTAKDAAIDDTYPRESNDYGELITYLTANVSHAALECFKDGWLEYIQQYPERIKPAAWCDECGQKLNIE DALIAWSKEDQNEVFILDADCRAKFDEFDPMESRPLPGITGADLEELATKVGLSELDIEKLEEKLKLWAVIPASGNSGWV YFIKSESSHEIKIGYTAGPIEKRITSLQTAHSSNLRVLATVPGTREYEKELHRKFADHRLKGEWFAPHHDLVSFIAVLKD NDSRATLVDPTNQTGH >Mature_415_residues PKCTAQEIIKEISEVQSISLPNDWFDNLSDKQSVFSSLYQWMTDSGRVPSDQLTTLHNRTYVGEKTYSKLLTFERKRLAK TLKLRGEKLEEAVAWSDMNSGPKSEIGQSPIAGDVILVIPESSRKALNDFSIRFRNENWLAAVKKVKNHAAGATYYQWLV SQVERPDHIGDTAKDAAIDDTYPRESNDYGELITYLTANVSHAALECFKDGWLEYIQQYPERIKPAAWCDECGQKLNIED ALIAWSKEDQNEVFILDADCRAKFDEFDPMESRPLPGITGADLEELATKVGLSELDIEKLEEKLKLWAVIPASGNSGWVY FIKSESSHEIKIGYTAGPIEKRITSLQTAHSSNLRVLATVPGTREYEKELHRKFADHRLKGEWFAPHHDLVSFIAVLKDN DSRATLVDPTNQTGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47082; Mature: 46951
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKCTAQEIIKEISEVQSISLPNDWFDNLSDKQSVFSSLYQWMTDSGRVPSDQLTTLHNR CCCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC TYVGEKTYSKLLTFERKRLAKTLKLRGEKLEEAVAWSDMNSGPKSEIGQSPIAGDVILVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEE PESSRKALNDFSIRFRNENWLAAVKKVKNHAAGATYYQWLVSQVERPDHIGDTAKDAAID CCCCHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHCCCC DTYPRESNDYGELITYLTANVSHAALECFKDGWLEYIQQYPERIKPAAWCDECGQKLNIE CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC DALIAWSKEDQNEVFILDADCRAKFDEFDPMESRPLPGITGADLEELATKVGLSELDIEK HHHEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHH LEEKLKLWAVIPASGNSGWVYFIKSESSHEIKIGYTAGPIEKRITSLQTAHSSNLRVLAT HHHHHEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEE VPGTREYEKELHRKFADHRLKGEWFAPHHDLVSFIAVLKDNDSRATLVDPTNQTGH CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure PKCTAQEIIKEISEVQSISLPNDWFDNLSDKQSVFSSLYQWMTDSGRVPSDQLTTLHNR CCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC TYVGEKTYSKLLTFERKRLAKTLKLRGEKLEEAVAWSDMNSGPKSEIGQSPIAGDVILVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEE PESSRKALNDFSIRFRNENWLAAVKKVKNHAAGATYYQWLVSQVERPDHIGDTAKDAAID CCCCHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHCCCC DTYPRESNDYGELITYLTANVSHAALECFKDGWLEYIQQYPERIKPAAWCDECGQKLNIE CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC DALIAWSKEDQNEVFILDADCRAKFDEFDPMESRPLPGITGADLEELATKVGLSELDIEK HHHEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHH LEEKLKLWAVIPASGNSGWVYFIKSESSHEIKIGYTAGPIEKRITSLQTAHSSNLRVLAT HHHHHEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEE VPGTREYEKELHRKFADHRLKGEWFAPHHDLVSFIAVLKDNDSRATLVDPTNQTGH CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA