| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78224239
Identifier: 78224239
GI number: 78224239
Start: 3434469
End: 3435128
Strand: Direct
Name: 78224239
Synonym: Gmet_3046
Alternate gene names: NA
Gene position: 3434469-3435128 (Clockwise)
Preceding gene: 78224236
Following gene: 78224240
Centisome position: 85.92
GC content: 51.52
Gene sequence:
>660_bases ATGCCAGTCCGCAAGATCCCCAAGACATACCGCTCCATCTCCGGCAGGTTCCCGAGCGCCATCAACGGACGCTGCATCGG CTACGAATCCAAACTTGAGCGGGACTACTATCTCCGCCTTGAGTTCGATCAGACCATCGCAAGCTACGAGGAGCAGCCAA TCAGACTTTCCGGCTCGGTTGATGGCAAGGAGGTGTCCTACACACCAGACTGCCTGGTCAAATTCCTCGACGGCAAACCG CCACGAATCGTTGAAGTCAAATCCCAGGAAGAATTAGACAAGAAAGCCGAAGACCTCGAGCGAAGGTTCTCTCTTGCGAG AAACCACGTCGAGGGACAAGGTGGCGAATTTGTCATCATAAATGAAAAGGATATCTATGATGACGCCCTTGCCAACTATC GCCTCATCTACCGCTTCGTCAAGCCTCCCCCTAATATCGAAACGAAACGAAAGCTAATCATTGGAATACTGGAGCACGCC GGGCCCCTGCCTCTCAGAGATCTTCTAAAGTCCCTTGGAGAGGACCGCATAGCCCAAGCCCATTTCACCCGTGCAATCTG GCACATGTTGTACACACGTGAAATTGAGGCCGATCTGAGCAAGCCAATAAGTCATAGCACCATATTGAGGATCTCAAATG GCACAGAGAATCTCTCTTAA
Upstream 100 bases:
>100_bases AATTGTTTCAAATTTTAAAAGTTAATGCTACTCTTTGCATAGTTAGTGCTACAAAATCGCAATTTTCAATAGATAGCGCT ACAAAATTGCAGAGGGGCGC
Downstream 100 bases:
>100_bases GGCCGGAAGCATCGTCTACTGCGGGAACGTGGAATACGAGGTCATTGGCCCCGTAGACTTCAACTCCATCAAGGCGCGCA ATGTCATCGACGGAGCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Urease Gamma Subunit Region
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPVRKIPKTYRSISGRFPSAINGRCIGYESKLERDYYLRLEFDQTIASYEEQPIRLSGSVDGKEVSYTPDCLVKFLDGKP PRIVEVKSQEELDKKAEDLERRFSLARNHVEGQGGEFVIINEKDIYDDALANYRLIYRFVKPPPNIETKRKLIIGILEHA GPLPLRDLLKSLGEDRIAQAHFTRAIWHMLYTREIEADLSKPISHSTILRISNGTENLS
Sequences:
>Translated_219_residues MPVRKIPKTYRSISGRFPSAINGRCIGYESKLERDYYLRLEFDQTIASYEEQPIRLSGSVDGKEVSYTPDCLVKFLDGKP PRIVEVKSQEELDKKAEDLERRFSLARNHVEGQGGEFVIINEKDIYDDALANYRLIYRFVKPPPNIETKRKLIIGILEHA GPLPLRDLLKSLGEDRIAQAHFTRAIWHMLYTREIEADLSKPISHSTILRISNGTENLS >Mature_218_residues PVRKIPKTYRSISGRFPSAINGRCIGYESKLERDYYLRLEFDQTIASYEEQPIRLSGSVDGKEVSYTPDCLVKFLDGKPP RIVEVKSQEELDKKAEDLERRFSLARNHVEGQGGEFVIINEKDIYDDALANYRLIYRFVKPPPNIETKRKLIIGILEHAG PLPLRDLLKSLGEDRIAQAHFTRAIWHMLYTREIEADLSKPISHSTILRISNGTENLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25175; Mature: 25044
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRKIPKTYRSISGRFPSAINGRCIGYESKLERDYYLRLEFDQTIASYEEQPIRLSGSV CCCCHHHHHHHHHCCCCCCCCCCEEECCHHHCCCCEEEEEEHHHHHHHHCCCCEEEECCC DGKEVSYTPDCLVKFLDGKPPRIVEVKSQEELDKKAEDLERRFSLARNHVEGQGGEFVII CCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NEKDIYDDALANYRLIYRFVKPPPNIETKRKLIIGILEHAGPLPLRDLLKSLGEDRIAQA CCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHH HFTRAIWHMLYTREIEADLSKPISHSTILRISNGTENLS HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure PVRKIPKTYRSISGRFPSAINGRCIGYESKLERDYYLRLEFDQTIASYEEQPIRLSGSV CCCHHHHHHHHHCCCCCCCCCCEEECCHHHCCCCEEEEEEHHHHHHHHCCCCEEEECCC DGKEVSYTPDCLVKFLDGKPPRIVEVKSQEELDKKAEDLERRFSLARNHVEGQGGEFVII CCCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NEKDIYDDALANYRLIYRFVKPPPNIETKRKLIIGILEHAGPLPLRDLLKSLGEDRIAQA CCCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHH HFTRAIWHMLYTREIEADLSKPISHSTILRISNGTENLS HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA