Click here to switch to the map view.

The map label for this gene is 78224240

Identifier: 78224240

GI number: 78224240

Start: 3435106

End: 3437016

Strand: Direct

Name: 78224240

Synonym: Gmet_3047

Alternate gene names: NA

Gene position: 3435106-3437016 (Clockwise)

Preceding gene: 78224239

Following gene: 78224241

Centisome position: 85.93

GC content: 52.07

Gene sequence:

>1911_bases
ATGGCACAGAGAATCTCTCTTAAGGCCGGAAGCATCGTCTACTGCGGGAACGTGGAATACGAGGTCATTGGCCCCGTAGA
CTTCAACTCCATCAAGGCGCGCAATGTCATCGACGGAGCAATTCGAGTCCTGACATTGGGCGAGCTATCGGCACGAAGTA
CAGATGAAGAGAAGGTCCCTGCTGCGCCACTCAACTGCCTTTCCGAAGAAGAGCAGAAGATCGCCTTGCAGCGGTTCGAG
ATCATCAAACCCGCCGTGAGGAATCAACTCTCACGCAAGAAAATCGAAGAGCTTGCCGCGCAGAATGGAGTTCATTTCAC
GACTATCTACCGGATGCTTCGGGAATACGGAAAATCGGCAACGCCTTCTTCCCTGCTACCGAAGACGCATTGCCGTGGCG
GCAAGGGACAACATCGAATAGACCAGGCTGTGGAGGATATCATACGGCAGCATTTCAACGCCATAGCAGAAGCGAAACTG
GTCGACATCACAAAGGTCTCCATACAGTCTCTCCAAACAGCCATCCAGAACAAATGCAAGATTGCGGGATTGAAGGCGCC
AACGTGGGTCACCGTCGCCGAGCGGCTAGAGACATACCTAAAAGAGCAGAATATCCCAAGACAGAGGGGCCGCAGGAAAA
GACGCCAACGCCTCACTGCGGGAGGTACATTCCCAGATGCGAAATGGCCTCTTGACGTGGTGCAGATAGACCATACGCCA
CTCGACCTAATATTGGTTGACGATAAGGACCGCGAGCCCATTGGCAAGCCATATGTTTCTCTAGCCATTGACGTTTATAG
CCGGATGGTATTGGGTTTCAGCCTATCATTCGATGCGCCGAGCATTTTTTCGGTCGGCCAATTGATTGCCCACTGTATCC
TTCCTAAAGACCATTTCCTAGAAAGCGTAGGTGTCAATGCGAGGTGGGATGCATTCGGTATCATGCGGACCTTGCTACTT
GATAACGCCGGGGAATTTCGCAGTGAAGACTTCGTTCCGTTTGAGGAAGAATATTGGGTGGAGATCAGTTGGCGCCCTGT
TGGTAAGCCTGAATACGGAGGGCACATCGAGCGGTATGCCAAGACCCTTAACGGTAAAATCCATGACGAACCCGGCAGCA
CGTTTTCGGGCATCAATGATCGCGGCGACTACCCTTCTGAAGAAAAAGCCGTCTACACCATTGATGAGATAGAGAGATGG
CTCACCGTACTCATCGCAAAGGAATACAACGAGGAAAAGCATTCAGAGTTGGGCATTTCACCACGTAAGAAATACGAGCT
CGGCATTTTCGGGGACGACAAGACCGTAGGAATCGGGCTCCCAGACATAGTCGAAGACCAGGAACGGCTCAAAATTTTTC
TTCTTCCGACGTTTTGGCGCACAATACAACGCGAGGGGGTAAAACTCGACAAGATCAAATATTTTCACGATATCTTGAGG
CACTGGGTCGGCAAAACGGACGAAAACGGCAACGCTCGCAAGTTTCTGTTCAAACGCGATCCGAGGAAGATAAGCCCCCT
CTATTTTTTCGACCCCGACCGAAAGGAATTTTTCAAACTTCCATACAAGGACCTCACCCGGCCCCCGATGACCATCTGGG
AACTTCAGGGTTCCAAAAAGCGCTGCAAGGAAAAGGGGATCGACGATCCAGGCGAACAGCAGATTTTCGAAGCCTATGCT
GAGCGGATGAAGATCCGGGAAGAGGCGGTCGCGAAGACCAAGCAGGCCCGGCGGGAGCGGGAGACCGAGAGGCGACGGGG
CAAGAACAAGCCTATTGATCAGACAGACCGTAGCAACGCCTTCGCAAGAACCGATGAACAGTCCGCTCCATTGGATGACA
TCGCGAGCATTTATGATGACGCATCGCTGCTGGATGGCGTGATCGTGAAGAAAACTTCGGGGGAAGAGTAA

Upstream 100 bases:

>100_bases
GCCCATTTCACCCGTGCAATCTGGCACATGTTGTACACACGTGAAATTGAGGCCGATCTGAGCAAGCCAATAAGTCATAG
CACCATATTGAGGATCTCAA

Downstream 100 bases:

>100_bases
CGTGACGATAGATGACAAGCATGTCGCCAGACTGCTCCCCGATGCCAGGGAAATGATTGGCAGGAGCCTCGAAGAAAGGA
TCCATTACATCCATCAGGAT

Product: transposase

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MAQRISLKAGSIVYCGNVEYEVIGPVDFNSIKARNVIDGAIRVLTLGELSARSTDEEKVPAAPLNCLSEEEQKIALQRFE
IIKPAVRNQLSRKKIEELAAQNGVHFTTIYRMLREYGKSATPSSLLPKTHCRGGKGQHRIDQAVEDIIRQHFNAIAEAKL
VDITKVSIQSLQTAIQNKCKIAGLKAPTWVTVAERLETYLKEQNIPRQRGRRKRRQRLTAGGTFPDAKWPLDVVQIDHTP
LDLILVDDKDREPIGKPYVSLAIDVYSRMVLGFSLSFDAPSIFSVGQLIAHCILPKDHFLESVGVNARWDAFGIMRTLLL
DNAGEFRSEDFVPFEEEYWVEISWRPVGKPEYGGHIERYAKTLNGKIHDEPGSTFSGINDRGDYPSEEKAVYTIDEIERW
LTVLIAKEYNEEKHSELGISPRKKYELGIFGDDKTVGIGLPDIVEDQERLKIFLLPTFWRTIQREGVKLDKIKYFHDILR
HWVGKTDENGNARKFLFKRDPRKISPLYFFDPDRKEFFKLPYKDLTRPPMTIWELQGSKKRCKEKGIDDPGEQQIFEAYA
ERMKIREEAVAKTKQARRERETERRRGKNKPIDQTDRSNAFARTDEQSAPLDDIASIYDDASLLDGVIVKKTSGEE

Sequences:

>Translated_636_residues
MAQRISLKAGSIVYCGNVEYEVIGPVDFNSIKARNVIDGAIRVLTLGELSARSTDEEKVPAAPLNCLSEEEQKIALQRFE
IIKPAVRNQLSRKKIEELAAQNGVHFTTIYRMLREYGKSATPSSLLPKTHCRGGKGQHRIDQAVEDIIRQHFNAIAEAKL
VDITKVSIQSLQTAIQNKCKIAGLKAPTWVTVAERLETYLKEQNIPRQRGRRKRRQRLTAGGTFPDAKWPLDVVQIDHTP
LDLILVDDKDREPIGKPYVSLAIDVYSRMVLGFSLSFDAPSIFSVGQLIAHCILPKDHFLESVGVNARWDAFGIMRTLLL
DNAGEFRSEDFVPFEEEYWVEISWRPVGKPEYGGHIERYAKTLNGKIHDEPGSTFSGINDRGDYPSEEKAVYTIDEIERW
LTVLIAKEYNEEKHSELGISPRKKYELGIFGDDKTVGIGLPDIVEDQERLKIFLLPTFWRTIQREGVKLDKIKYFHDILR
HWVGKTDENGNARKFLFKRDPRKISPLYFFDPDRKEFFKLPYKDLTRPPMTIWELQGSKKRCKEKGIDDPGEQQIFEAYA
ERMKIREEAVAKTKQARRERETERRRGKNKPIDQTDRSNAFARTDEQSAPLDDIASIYDDASLLDGVIVKKTSGEE
>Mature_635_residues
AQRISLKAGSIVYCGNVEYEVIGPVDFNSIKARNVIDGAIRVLTLGELSARSTDEEKVPAAPLNCLSEEEQKIALQRFEI
IKPAVRNQLSRKKIEELAAQNGVHFTTIYRMLREYGKSATPSSLLPKTHCRGGKGQHRIDQAVEDIIRQHFNAIAEAKLV
DITKVSIQSLQTAIQNKCKIAGLKAPTWVTVAERLETYLKEQNIPRQRGRRKRRQRLTAGGTFPDAKWPLDVVQIDHTPL
DLILVDDKDREPIGKPYVSLAIDVYSRMVLGFSLSFDAPSIFSVGQLIAHCILPKDHFLESVGVNARWDAFGIMRTLLLD
NAGEFRSEDFVPFEEEYWVEISWRPVGKPEYGGHIERYAKTLNGKIHDEPGSTFSGINDRGDYPSEEKAVYTIDEIERWL
TVLIAKEYNEEKHSELGISPRKKYELGIFGDDKTVGIGLPDIVEDQERLKIFLLPTFWRTIQREGVKLDKIKYFHDILRH
WVGKTDENGNARKFLFKRDPRKISPLYFFDPDRKEFFKLPYKDLTRPPMTIWELQGSKKRCKEKGIDDPGEQQIFEAYAE
RMKIREEAVAKTKQARRERETERRRGKNKPIDQTDRSNAFARTDEQSAPLDDIASIYDDASLLDGVIVKKTSGEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 72793; Mature: 72662

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRISLKAGSIVYCGNVEYEVIGPVDFNSIKARNVIDGAIRVLTLGELSARSTDEEKVP
CCCEEEECCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCC
AAPLNCLSEEEQKIALQRFEIIKPAVRNQLSRKKIEELAAQNGVHFTTIYRMLREYGKSA
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TPSSLLPKTHCRGGKGQHRIDQAVEDIIRQHFNAIAEAKLVDITKVSIQSLQTAIQNKCK
CCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
IAGLKAPTWVTVAERLETYLKEQNIPRQRGRRKRRQRLTAGGTFPDAKWPLDVVQIDHTP
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
LDLILVDDKDREPIGKPYVSLAIDVYSRMVLGFSLSFDAPSIFSVGQLIAHCILPKDHFL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCHHHHH
ESVGVNARWDAFGIMRTLLLDNAGEFRSEDFVPFEEEYWVEISWRPVGKPEYGGHIERYA
HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHH
KTLNGKIHDEPGSTFSGINDRGDYPSEEKAVYTIDEIERWLTVLIAKEYNEEKHSELGIS
HHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHCCCC
PRKKYELGIFGDDKTVGIGLPDIVEDQERLKIFLLPTFWRTIQREGVKLDKIKYFHDILR
CCCCEEEEEECCCCEEECCCCHHHCCHHHEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHH
HWVGKTDENGNARKFLFKRDPRKISPLYFFDPDRKEFFKLPYKDLTRPPMTIWELQGSKK
HHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCHHHCCCCCCEEEEECCCHH
RCKEKGIDDPGEQQIFEAYAERMKIREEAVAKTKQARRERETERRRGKNKPIDQTDRSNA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FARTDEQSAPLDDIASIYDDASLLDGVIVKKTSGEE
CCCCCCCCCCHHHHHHHHCCHHHHCCEEEECCCCCC
>Mature Secondary Structure 
AQRISLKAGSIVYCGNVEYEVIGPVDFNSIKARNVIDGAIRVLTLGELSARSTDEEKVP
CCEEEECCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCC
AAPLNCLSEEEQKIALQRFEIIKPAVRNQLSRKKIEELAAQNGVHFTTIYRMLREYGKSA
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TPSSLLPKTHCRGGKGQHRIDQAVEDIIRQHFNAIAEAKLVDITKVSIQSLQTAIQNKCK
CCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
IAGLKAPTWVTVAERLETYLKEQNIPRQRGRRKRRQRLTAGGTFPDAKWPLDVVQIDHTP
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
LDLILVDDKDREPIGKPYVSLAIDVYSRMVLGFSLSFDAPSIFSVGQLIAHCILPKDHFL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCHHHHH
ESVGVNARWDAFGIMRTLLLDNAGEFRSEDFVPFEEEYWVEISWRPVGKPEYGGHIERYA
HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHH
KTLNGKIHDEPGSTFSGINDRGDYPSEEKAVYTIDEIERWLTVLIAKEYNEEKHSELGIS
HHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHCCCC
PRKKYELGIFGDDKTVGIGLPDIVEDQERLKIFLLPTFWRTIQREGVKLDKIKYFHDILR
CCCCEEEEEECCCCEEECCCCHHHCCHHHEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHH
HWVGKTDENGNARKFLFKRDPRKISPLYFFDPDRKEFFKLPYKDLTRPPMTIWELQGSKK
HHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCHHHCCCCCCEEEEECCCHH
RCKEKGIDDPGEQQIFEAYAERMKIREEAVAKTKQARRERETERRRGKNKPIDQTDRSNA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FARTDEQSAPLDDIASIYDDASLLDGVIVKKTSGEE
CCCCCCCCCCHHHHHHHHCCHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]