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The map label for this gene is yfiO [C]

Identifier: 78224207

GI number: 78224207

Start: 3399518

End: 3400267

Strand: Direct

Name: yfiO [C]

Synonym: Gmet_3014

Alternate gene names: 78224207

Gene position: 3399518-3400267 (Clockwise)

Preceding gene: 78224206

Following gene: 78224208

Centisome position: 85.04

GC content: 62.0

Gene sequence:

>750_bases
ATGAACCGTATCCAGAGACGCTCTCTTTTCCCTCTCCTCCTCGTCCTTGTGGTCGCCGGCTGCGCCACCACTCCGGACGC
GGTGAGCCGCAATCCCGAATCCATGGCCAAGGCGGCGGAAGAGTTCCAGACCTCCGGCCGCTACGAGGACGCCATCGCCC
AGTGGAAGAAGGTGCGGGAGAGCTATGCCTCGCCGGAACTCACCACCGAGGCCGAGCTTAAGATCGCCGACGCCCAATTC
GCCGACAAGAGCTACATCGAGGCGGCCGCCTCCTACGAAGAGTTCCGCAAGCTCCACCCCAACCACGAAAAGGCTCCCTA
CGCCCTCTACCGTCAGGCTCTCAGCCAATACGAGCAGATCACCGGCATCGACACCGACCAGACGCCGGTATCCAACGCGG
TGACCCTGTTCGAATCGTTCCTCCGGATCTACCCGTCCTCCGAGTACGCCGCGGAGGTGCGGGACAAGCTCGAAGTCTGC
CGCCTCAAGCAGGTGGAGCACGAAATCTATGTGGGGCGGTTCTACTACCGTACTGACCAGTACGGGGCAGCCATCAAGCG
CCTGGAGGATGCCCTGAAGAAGTATCCCCGCTCGCCGGCCCACGACGAAACCCTCTTCTATCTGGGGTCGGCCTATATCC
GCACCGGCGACAAGGCCAAAGGGCGCGATGCCTTCCAGCGCCTCTTCGCCGAGTACCGGACGAGCAAATACGTGGACGAG
GCCCGGAAGTTCATGGATAAGAACTTCTGA

Upstream 100 bases:

>100_bases
GGCGACTGTTGGCCCCAGGGGACGGGACGGAACTTTGCGTTGACTTTATCAGGGGATTTCACTACTTTTCCCCTGATACC
AGATCGGAAGGCGGGACCCC

Downstream 100 bases:

>100_bases
TGCGCGCTCCGCTGGTAGCCCTGCTCCTCCTGGCCCTTGCCGGCTGCGCCCGGGAAGATCGCTCCATCGAAGAGGTGCTG
CGGCAGCGGGAACGGGCACT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNRIQRRSLFPLLLVLVVAGCATTPDAVSRNPESMAKAAEEFQTSGRYEDAIAQWKKVRESYASPELTTEAELKIADAQF
ADKSYIEAAASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSNAVTLFESFLRIYPSSEYAAEVRDKLEVC
RLKQVEHEIYVGRFYYRTDQYGAAIKRLEDALKKYPRSPAHDETLFYLGSAYIRTGDKAKGRDAFQRLFAEYRTSKYVDE
ARKFMDKNF

Sequences:

>Translated_249_residues
MNRIQRRSLFPLLLVLVVAGCATTPDAVSRNPESMAKAAEEFQTSGRYEDAIAQWKKVRESYASPELTTEAELKIADAQF
ADKSYIEAAASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSNAVTLFESFLRIYPSSEYAAEVRDKLEVC
RLKQVEHEIYVGRFYYRTDQYGAAIKRLEDALKKYPRSPAHDETLFYLGSAYIRTGDKAKGRDAFQRLFAEYRTSKYVDE
ARKFMDKNF
>Mature_249_residues
MNRIQRRSLFPLLLVLVVAGCATTPDAVSRNPESMAKAAEEFQTSGRYEDAIAQWKKVRESYASPELTTEAELKIADAQF
ADKSYIEAAASYEEFRKLHPNHEKAPYALYRQALSQYEQITGIDTDQTPVSNAVTLFESFLRIYPSSEYAAEVRDKLEVC
RLKQVEHEIYVGRFYYRTDQYGAAIKRLEDALKKYPRSPAHDETLFYLGSAYIRTGDKAKGRDAFQRLFAEYRTSKYVDE
ARKFMDKNF

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=211, Percent_Identity=25.5924170616114, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28730; Mature: 28730

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCC
>Mature Secondary Structure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HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]