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The map label for this gene is tsr [C]

Identifier: 78224135

GI number: 78224135

Start: 3325295

End: 3327385

Strand: Reverse

Name: tsr [C]

Synonym: Gmet_2939

Alternate gene names: 78224135

Gene position: 3327385-3325295 (Counterclockwise)

Preceding gene: 78224136

Following gene: 78224120

Centisome position: 83.24

GC content: 62.36

Gene sequence:

>2091_bases
ATGCGTAACAGGCTCGAGTTCAAGGTGCTGGGGATTATTGGAGCAACCCTTTGCGTGGGATTCGCCATCCTTGGTGTAAC
CGCCATCTGGCTTGAATACACCGCCCTGATGAAACTTCAGGCTGCCAATACCCGCGGCCTCTCAACCCTCATCTCCCAGG
AAATCGCTGAAAACATGATGTCGGGCGACATGGCGGTGATAAACCGATATATCGCACGGGTGAAAGGGAAGGGGCAGGTG
CTCGACCTCAAGGTGTTCGGTCCCGCCGCAAAGCCGTGGGGGGACAAGGGCGCGGCTGCTGACCCGGTGGTTGCGGAAGC
CATTGCGGCAGGCCGTGCCCGGGAACTGCGCCATACCCTGGATGACGGGAAGCATGTCCTGAGCTTTGCCGTCCCCCTGG
TGAACGAGGAGCGCTGCACCACCTGCCACGAGAAGGGAGCCCGGTACACCGGTGCGATTCTTCTCACCACCTCGCTTCAG
GATGGGTATGTCAGCGCGCGGAACCTTACCATAGCCCTGGCTGCAACCGGCTTTGTCTTTTTCCTGATCATGCTTGGTAC
CTTGTACCTCTTCTTCCGTCAGACCATCGTGCGGAACATCCGTGAGCTGTCCGACAGGATCCAGGTCATCGCCCACGGCG
AGGGGGATCTGACCTCACAGATGCCAGTCCGGACCGGCGACGAGCTCGGAGAGCTTGCCGAGGGGGTCAACATGCTGATC
GCCAAGCTGCGGGAGATTGTGACATCCCTCTACAGCCAGGCGGGGCACATCGCCATATCGGCCTGCCGCACCGTCAAGGG
GACCGAAGGGCTCGTCGCCTCTACGGCGGAACAGAAGGACCTTTCCACCTCGGTGGCCGTGGCGTCGGAGGAGATGTCGG
CTACCCTGAACGATGTGGCAGCCACCACCCAGCGGGCGGCGCAGCTCTCCATTAACGTGGATCAGGCTGCAAAAGTGGGG
ATGGAGACCGTGGAGGAGACCTCCCTGAGCATCGACCAGATCCGGACCAGCGTCCTCGGCACCCTGGGAGCCATGGGGAA
GCTGGAGACTTCGTCGGGGCAGATCGGCGAGATCGTGGGAATTATCGAGGATATCGCCGACCAGACCAATCTCCTGGCCC
TCAACGCGGCCATCGAGGCTGCCCGGGCCGGCGATGCGGGGCGGGGCTTTGCGGTGGTGGCCAACGAAGTGAAGACCCTG
TCAAATCGCACCGCCACGTCCACAAGACAGATCGCCGCCATTGTCCGGAGCATCCAGGAAGAGATCGGGACGGTGGTGAC
ATCCATTGGCGAGGGGAAAACGAGGGTTGAGGAAGGGGTCGAGAAGGCGGGGCATGCCCGCCAGCAACTGGAGGGGATCC
TGCGGTTGGCGACCGATTCAACGGACATGATCAGCCAGATTGCCACGGCCACTGAGGAGCAGAGTGCCACGACCGTCGAG
ATCACGGAGAAGATCGGCCAGGTGTCGGCCACGGCAGGGGCGGTGAACGGCCAGATGGAGGAGACGGCCCGCATCTTCCG
CGAGTTGTCGGAAACAGCCGAGAAAATCTACGGGACCGTGGGCCGGTTCAGCGTGGGGTGCTACCATGATGCCGTCAAGG
GGTATGCCGCGGAGCTGCGGGACCGGGCGACGGCGGTCATAGAGAAGGCCCTGGAGGACCGGAAGATCACCATCGATGCC
CTCTTCAGCACCGATTACACGCCGATTCCGAACACCACTCCCCAGAAGTACCGTACCCCCTTCGACCGGTTCTTTGACGA
ACTCGTCTCGCCGGTTCAGGAGGAGATCCTGGGCCGGGACAGTGGGGTGTACTATGCCATCTGTGTCGATCGCGAGGGGT
ACTGCCCCTCCCACAACCTGCGCTATTCCCGCCCCCTGACCGGCGACGTCGCCGTGGACAAGGACCACAACCGCACCAAG
CGGATCTTCAACGACCGGACCGGCATCCGTTGCGCCACCCATACCCAGAGCTTTCTGCTCCAGACCTATCTGCGGGACAC
GGGGGAGGTCATGAACGACCTGTCAACGCCCATAACAGTCGGCGGGAAACACTGGGGAGCGGTCAGGATCGGCTACCGGG
CCGACGACTGA

Upstream 100 bases:

>100_bases
AACTAATTAATAATCAAACACGTTTCTGAAATCGATTAAAGGATTGCCTCTCGGTACCGATAAGATACTAGCGGTCATGT
TATCGGAGAGAGGTGTCATA

Downstream 100 bases:

>100_bases
TAGCAAGCCCTAAACCCGGAACCCGGTCATTGCCTCGTTCAGTTCGTCGATCTGGCGGGTGAGGCCGTTGACGGCATTTT
CCATGACCCGGGTGGTCTCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 696; Mature: 696

Protein sequence:

>696_residues
MRNRLEFKVLGIIGATLCVGFAILGVTAIWLEYTALMKLQAANTRGLSTLISQEIAENMMSGDMAVINRYIARVKGKGQV
LDLKVFGPAAKPWGDKGAAADPVVAEAIAAGRARELRHTLDDGKHVLSFAVPLVNEERCTTCHEKGARYTGAILLTTSLQ
DGYVSARNLTIALAATGFVFFLIMLGTLYLFFRQTIVRNIRELSDRIQVIAHGEGDLTSQMPVRTGDELGELAEGVNMLI
AKLREIVTSLYSQAGHIAISACRTVKGTEGLVASTAEQKDLSTSVAVASEEMSATLNDVAATTQRAAQLSINVDQAAKVG
METVEETSLSIDQIRTSVLGTLGAMGKLETSSGQIGEIVGIIEDIADQTNLLALNAAIEAARAGDAGRGFAVVANEVKTL
SNRTATSTRQIAAIVRSIQEEIGTVVTSIGEGKTRVEEGVEKAGHARQQLEGILRLATDSTDMISQIATATEEQSATTVE
ITEKIGQVSATAGAVNGQMEETARIFRELSETAEKIYGTVGRFSVGCYHDAVKGYAAELRDRATAVIEKALEDRKITIDA
LFSTDYTPIPNTTPQKYRTPFDRFFDELVSPVQEEILGRDSGVYYAICVDREGYCPSHNLRYSRPLTGDVAVDKDHNRTK
RIFNDRTGIRCATHTQSFLLQTYLRDTGEVMNDLSTPITVGGKHWGAVRIGYRADD

Sequences:

>Translated_696_residues
MRNRLEFKVLGIIGATLCVGFAILGVTAIWLEYTALMKLQAANTRGLSTLISQEIAENMMSGDMAVINRYIARVKGKGQV
LDLKVFGPAAKPWGDKGAAADPVVAEAIAAGRARELRHTLDDGKHVLSFAVPLVNEERCTTCHEKGARYTGAILLTTSLQ
DGYVSARNLTIALAATGFVFFLIMLGTLYLFFRQTIVRNIRELSDRIQVIAHGEGDLTSQMPVRTGDELGELAEGVNMLI
AKLREIVTSLYSQAGHIAISACRTVKGTEGLVASTAEQKDLSTSVAVASEEMSATLNDVAATTQRAAQLSINVDQAAKVG
METVEETSLSIDQIRTSVLGTLGAMGKLETSSGQIGEIVGIIEDIADQTNLLALNAAIEAARAGDAGRGFAVVANEVKTL
SNRTATSTRQIAAIVRSIQEEIGTVVTSIGEGKTRVEEGVEKAGHARQQLEGILRLATDSTDMISQIATATEEQSATTVE
ITEKIGQVSATAGAVNGQMEETARIFRELSETAEKIYGTVGRFSVGCYHDAVKGYAAELRDRATAVIEKALEDRKITIDA
LFSTDYTPIPNTTPQKYRTPFDRFFDELVSPVQEEILGRDSGVYYAICVDREGYCPSHNLRYSRPLTGDVAVDKDHNRTK
RIFNDRTGIRCATHTQSFLLQTYLRDTGEVMNDLSTPITVGGKHWGAVRIGYRADD
>Mature_696_residues
MRNRLEFKVLGIIGATLCVGFAILGVTAIWLEYTALMKLQAANTRGLSTLISQEIAENMMSGDMAVINRYIARVKGKGQV
LDLKVFGPAAKPWGDKGAAADPVVAEAIAAGRARELRHTLDDGKHVLSFAVPLVNEERCTTCHEKGARYTGAILLTTSLQ
DGYVSARNLTIALAATGFVFFLIMLGTLYLFFRQTIVRNIRELSDRIQVIAHGEGDLTSQMPVRTGDELGELAEGVNMLI
AKLREIVTSLYSQAGHIAISACRTVKGTEGLVASTAEQKDLSTSVAVASEEMSATLNDVAATTQRAAQLSINVDQAAKVG
METVEETSLSIDQIRTSVLGTLGAMGKLETSSGQIGEIVGIIEDIADQTNLLALNAAIEAARAGDAGRGFAVVANEVKTL
SNRTATSTRQIAAIVRSIQEEIGTVVTSIGEGKTRVEEGVEKAGHARQQLEGILRLATDSTDMISQIATATEEQSATTVE
ITEKIGQVSATAGAVNGQMEETARIFRELSETAEKIYGTVGRFSVGCYHDAVKGYAAELRDRATAVIEKALEDRKITIDA
LFSTDYTPIPNTTPQKYRTPFDRFFDELVSPVQEEILGRDSGVYYAICVDREGYCPSHNLRYSRPLTGDVAVDKDHNRTK
RIFNDRTGIRCATHTQSFLLQTYLRDTGEVMNDLSTPITVGGKHWGAVRIGYRADD

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=403, Percent_Identity=29.5285359801489, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1787690, Length=347, Percent_Identity=29.1066282420749, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1788195, Length=275, Percent_Identity=31.2727272727273, Blast_Score=113, Evalue=5e-26,
Organism=Escherichia coli, GI1788194, Length=384, Percent_Identity=27.6041666666667, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1789453, Length=329, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75185; Mature: 75185

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRLEFKVLGIIGATLCVGFAILGVTAIWLEYTALMKLQAANTRGLSTLISQEIAENMM
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SGDMAVINRYIARVKGKGQVLDLKVFGPAAKPWGDKGAAADPVVAEAIAAGRARELRHTL
CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DDGKHVLSFAVPLVNEERCTTCHEKGARYTGAILLTTSLQDGYVSARNLTIALAATGFVF
HCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCEECCCEEEEHHHHHHHH
FLIMLGTLYLFFRQTIVRNIRELSDRIQVIAHGEGDLTSQMPVRTGDELGELAEGVNMLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AKLREIVTSLYSQAGHIAISACRTVKGTEGLVASTAEQKDLSTSVAVASEEMSATLNDVA
HHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ATTQRAAQLSINVDQAAKVGMETVEETSLSIDQIRTSVLGTLGAMGKLETSSGQIGEIVG
HHHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
IIEDIADQTNLLALNAAIEAARAGDAGRGFAVVANEVKTLSNRTATSTRQIAAIVRSIQE
HHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EIGTVVTSIGEGKTRVEEGVEKAGHARQQLEGILRLATDSTDMISQIATATEEQSATTVE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH
ITEKIGQVSATAGAVNGQMEETARIFRELSETAEKIYGTVGRFSVGCYHDAVKGYAAELR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DRATAVIEKALEDRKITIDALFSTDYTPIPNTTPQKYRTPFDRFFDELVSPVQEEILGRD
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCC
SGVYYAICVDREGYCPSHNLRYSRPLTGDVAVDKDHNRTKRIFNDRTGIRCATHTQSFLL
CCEEEEEEECCCCCCCCCCCEECCCCCCCEEECCCCCHHHHHHCCCCCCEEEHHHHHHHH
QTYLRDTGEVMNDLSTPITVGGKHWGAVRIGYRADD
HHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCC
>Mature Secondary Structure
MRNRLEFKVLGIIGATLCVGFAILGVTAIWLEYTALMKLQAANTRGLSTLISQEIAENMM
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SGDMAVINRYIARVKGKGQVLDLKVFGPAAKPWGDKGAAADPVVAEAIAAGRARELRHTL
CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DDGKHVLSFAVPLVNEERCTTCHEKGARYTGAILLTTSLQDGYVSARNLTIALAATGFVF
HCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCEECCCEEEEHHHHHHHH
FLIMLGTLYLFFRQTIVRNIRELSDRIQVIAHGEGDLTSQMPVRTGDELGELAEGVNMLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AKLREIVTSLYSQAGHIAISACRTVKGTEGLVASTAEQKDLSTSVAVASEEMSATLNDVA
HHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ATTQRAAQLSINVDQAAKVGMETVEETSLSIDQIRTSVLGTLGAMGKLETSSGQIGEIVG
HHHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
IIEDIADQTNLLALNAAIEAARAGDAGRGFAVVANEVKTLSNRTATSTRQIAAIVRSIQE
HHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EIGTVVTSIGEGKTRVEEGVEKAGHARQQLEGILRLATDSTDMISQIATATEEQSATTVE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH
ITEKIGQVSATAGAVNGQMEETARIFRELSETAEKIYGTVGRFSVGCYHDAVKGYAAELR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DRATAVIEKALEDRKITIDALFSTDYTPIPNTTPQKYRTPFDRFFDELVSPVQEEILGRD
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCC
SGVYYAICVDREGYCPSHNLRYSRPLTGDVAVDKDHNRTKRIFNDRTGIRCATHTQSFLL
CCEEEEEEECCCCCCCCCCCEECCCCCCCEEECCCCCHHHHHHCCCCCCEEEHHHHHHHH
QTYLRDTGEVMNDLSTPITVGGKHWGAVRIGYRADD
HHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA