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The map label for this gene is ytqA [H]

Identifier: 78224132

GI number: 78224132

Start: 3321425

End: 3322384

Strand: Direct

Name: ytqA [H]

Synonym: Gmet_2936

Alternate gene names: 78224132

Gene position: 3321425-3322384 (Clockwise)

Preceding gene: 78224131

Following gene: 78224133

Centisome position: 83.09

GC content: 62.92

Gene sequence:

>960_bases
ATGCCCGATTTGCTCATCAACCCCGATCTCCGCTTCAATTCGTACGGCACGTACCTGCGCCGCCGCTTCGGCTGCCGCGT
GAGCAAGGTGAACGTGGATGGCGGATTCACCTGCCCCAATCGCGACGGCACTCGGGGGACAGGGGGGTGCATCTACTGCG
ACAATGCCTCCTTCTCGCCGGGGGGCACCGTGGCCGAAATACCGATCGAGATTCAGATGGCCGAGGGGATGGCCTATCAC
CGGCGCCGCCTCGGGAGCGAGAAATTCATCGTCTACTTTCAGAAGTTCACCAACACCTACGCCCCGGTGGAGCGACTCCG
GGACCTCTACGCCCGGGCACTGGCCCATCCGGACGTAATCGGCATCTCCGTCGGCACCCGCCCCGATTCCCTGTCGGACG
AGGCCTTGGACCTTCTGGCCGATCTGGCGAAACGTCACTACGTCTGTATCGAGCTGGGCCTCCAGTCCATGGACGACAAA
ATCCTCCAACAGATTGGCCGTGGCCACACCCTGACCGAATACCTGGAGGCGGTTGCACGGATCGAGGGACGGGGGATCGA
GCTCTGCACCCACCTGATCTACGGCTTCCCCGGCGAGACCCGCGACGGGTTCCTGCGAACCGCCGACATGATGGCGGGGC
TTCCCGTGAACTCGGTGAAGATCCACCAACTCCACGCGGTGAAGGGGACGCGGCTGGCGGAATTGTACCACCAGGGCGAC
TTCGTTCCCATCACCCACCAGGAGTACGTGGCCACCGCCTGCGACTTCCTGGAGATCCTGCCGCCGCGCATCGCCATCCA
GCGACTCTACGGCTCGGCCCCCCTCACCATCCGGGTTGCTCCCACTTGGAATCTGAAGAACAACCAGATGTGGTTTTCGA
TCGTGAACGAGCTGAAACGCCGCGGCACCTGGCAGGGATGCCGACTTACCGACTCATGCCTCAAGGCGGGTAACTTGTAG

Upstream 100 bases:

>100_bases
CGTTGCCCTCATCTCGGCCGTCATCGCCGCCGTCAACCCCAACGAAGAAGCCCGCGCCATCCTGACGCTCCTGGAGCAGG
GACGACGCACCGAGTAACCA

Downstream 100 bases:

>100_bases
GGCGGGTCTCAAACCCGCCCTTTTTTCAGGAGGAACATCATGACGTTTGCCACCCTGGCAGGAAGCGCCACGGAATACCC
CATCGGCAAGATCCTCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MPDLLINPDLRFNSYGTYLRRRFGCRVSKVNVDGGFTCPNRDGTRGTGGCIYCDNASFSPGGTVAEIPIEIQMAEGMAYH
RRRLGSEKFIVYFQKFTNTYAPVERLRDLYARALAHPDVIGISVGTRPDSLSDEALDLLADLAKRHYVCIELGLQSMDDK
ILQQIGRGHTLTEYLEAVARIEGRGIELCTHLIYGFPGETRDGFLRTADMMAGLPVNSVKIHQLHAVKGTRLAELYHQGD
FVPITHQEYVATACDFLEILPPRIAIQRLYGSAPLTIRVAPTWNLKNNQMWFSIVNELKRRGTWQGCRLTDSCLKAGNL

Sequences:

>Translated_319_residues
MPDLLINPDLRFNSYGTYLRRRFGCRVSKVNVDGGFTCPNRDGTRGTGGCIYCDNASFSPGGTVAEIPIEIQMAEGMAYH
RRRLGSEKFIVYFQKFTNTYAPVERLRDLYARALAHPDVIGISVGTRPDSLSDEALDLLADLAKRHYVCIELGLQSMDDK
ILQQIGRGHTLTEYLEAVARIEGRGIELCTHLIYGFPGETRDGFLRTADMMAGLPVNSVKIHQLHAVKGTRLAELYHQGD
FVPITHQEYVATACDFLEILPPRIAIQRLYGSAPLTIRVAPTWNLKNNQMWFSIVNELKRRGTWQGCRLTDSCLKAGNL
>Mature_318_residues
PDLLINPDLRFNSYGTYLRRRFGCRVSKVNVDGGFTCPNRDGTRGTGGCIYCDNASFSPGGTVAEIPIEIQMAEGMAYHR
RRLGSEKFIVYFQKFTNTYAPVERLRDLYARALAHPDVIGISVGTRPDSLSDEALDLLADLAKRHYVCIELGLQSMDDKI
LQQIGRGHTLTEYLEAVARIEGRGIELCTHLIYGFPGETRDGFLRTADMMAGLPVNSVKIHQLHAVKGTRLAELYHQGDF
VPITHQEYVATACDFLEILPPRIAIQRLYGSAPLTIRVAPTWNLKNNQMWFSIVNELKRRGTWQGCRLTDSCLKAGNL

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=273, Percent_Identity=37.3626373626374, Blast_Score=197, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35770; Mature: 35638

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLLINPDLRFNSYGTYLRRRFGCRVSKVNVDGGFTCPNRDGTRGTGGCIYCDNASFSP
CCCCEECCCCCCCHHHHHHHHHHCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCCCC
GGTVAEIPIEIQMAEGMAYHRRRLGSEKFIVYFQKFTNTYAPVERLRDLYARALAHPDVI
CCEEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCEE
GISVGTRPDSLSDEALDLLADLAKRHYVCIELGLQSMDDKILQQIGRGHTLTEYLEAVAR
EEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHH
IEGRGIELCTHLIYGFPGETRDGFLRTADMMAGLPVNSVKIHQLHAVKGTRLAELYHQGD
HCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCC
FVPITHQEYVATACDFLEILPPRIAIQRLYGSAPLTIRVAPTWNLKNNQMWFSIVNELKR
EEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
RGTWQGCRLTDSCLKAGNL
CCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
PDLLINPDLRFNSYGTYLRRRFGCRVSKVNVDGGFTCPNRDGTRGTGGCIYCDNASFSP
CCCEECCCCCCCHHHHHHHHHHCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCCCC
GGTVAEIPIEIQMAEGMAYHRRRLGSEKFIVYFQKFTNTYAPVERLRDLYARALAHPDVI
CCEEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHCCCCEE
GISVGTRPDSLSDEALDLLADLAKRHYVCIELGLQSMDDKILQQIGRGHTLTEYLEAVAR
EEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHH
IEGRGIELCTHLIYGFPGETRDGFLRTADMMAGLPVNSVKIHQLHAVKGTRLAELYHQGD
HCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCC
FVPITHQEYVATACDFLEILPPRIAIQRLYGSAPLTIRVAPTWNLKNNQMWFSIVNELKR
EEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
RGTWQGCRLTDSCLKAGNL
CCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]