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The map label for this gene is selD [H]

Identifier: 78224103

GI number: 78224103

Start: 3290478

End: 3291509

Strand: Reverse

Name: selD [H]

Synonym: Gmet_2907

Alternate gene names: 78224103

Gene position: 3291509-3290478 (Counterclockwise)

Preceding gene: 78224104

Following gene: 78224102

Centisome position: 82.34

GC content: 67.64

Gene sequence:

>1032_bases
ATGATCAAGCTGACATCCCTCGTAAAAGCGGCCGGCTGAGCGGCCAAGCTGGGCCCGGCGGGCCTGGAAGACGCACTGAG
CGGCATCCTGGGGAAGGGAGACGATCCGAACCTCCTCGTGGGGCCGGAGACCGCCGACGACGCGGGGGTCTACCGGATAG
GGGAGGGGCTCGCCCTGGTGGATACGGTGGATATCATCACCCCCCTGGTGGATGACCCGTTCACTTTCGGCCGGATTGCG
GCGGCCAACGCCCTCTCCGATGTCTACGCCATGGGTGGAAGGCCGGTGACCGCCATGAACCTGGCCTTCTTCCCGGCCTG
CACCCTGCCGGGACAGATCCTGGCCGACATCATGGCCGGTGGCCTTGACGCGGTGCGGGAGGCGGGGGCCTGCCTCGTGG
GGGGGCACACGGTGGAGGACCACGAGCTGAAATACGGTCTCTCGGTCACCGGTCTCATCAGCCCCGGGCGGATCGTGCGC
AACTCCACGGCCCGCCCCGGCGACAGGCTCATCCTCACCAAGCCCCTGGGGACGGGGATAGTCTCCACGGCCATCAAGGC
CGACATGGTTGCACCCGGCGTTGTCGACGAAGCGATCCGCTGGATGGCGCTCCTGAACGCTTCGGCTGCGGGGCTCATGC
TGGAATGCGAGGCTTCCGCCTGCACCGATGTCACCGGTTTCGGCCTTCTGGGGCATGCCTGCGAGATGGCCCGGGGAGCC
GGCGTTACCCTCGAAATCGCCCTTGACGCCGTTCCCCTCATGGGAGGAGTCGAGGACCTTGTGGCCGATGGCCTCGTGCC
GGCCGGCTGCTACCGCAACCGCGATCACTATACCCCCTTAGTCTCCGTTTCCGCCGGGGCGGGAGGCCGGCTCATCCCCC
TCTTCGACCCCCAGACCTCCGGGGGGCTCCTCATCACCCTTTCGCCGCAATTCGCCGACTCCTTCCTCTCCATGGCCCGG
GACCGAGGGCTCTTTGCCGTCGCCGTGGGTGGGGTTCTCCCTCCCCGGGAGCATGCCGTTGTCATCGCCTGA

Upstream 100 bases:

>100_bases
AGGAACTGGCCTCGTGGGCCGGCACCATCCCCTACGAAATTTTCTGCGGCATCAGCAAGCGGGTGCCGCGGGTCTACCTG
AACGCGACCCGGTGACTGTG

Downstream 100 bases:

>100_bases
TCGGCTTGCCATTGCCGTTGACCTTGGCACCACGACCCTGGCCGCCTCCCTCCTCGATATGGCCACCGGCGAGCGGTTGG
CCGTTGCCGGCAGCCTGAAC

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIKLTSLVKAAGUAAKLGPAGLEDALSGILGKGDDPNLLVGPETADDAGVYRIGEGLALVDTVDIITPLVDDPFTFGRIA
AANALSDVYAMGGRPVTAMNLAFFPACTLPGQILADIMAGGLDAVREAGACLVGGHTVEDHELKYGLSVTGLISPGRIVR
NSTARPGDRLILTKPLGTGIVSTAIKADMVAPGVVDEAIRWMALLNASAAGLMLECEASACTDVTGFGLLGHACEMARGA
GVTLEIALDAVPLMGGVEDLVADGLVPAGCYRNRDHYTPLVSVSAGAGGRLIPLFDPQTSGGLLITLSPQFADSFLSMAR
DRGLFAVAVGGVLPPREHAVVIA

Sequences:

>Translated_343_residues
MIKLTSLVKAAG*AAKLGPAGLEDALSGILGKGDDPNLLVGPETADDAGVYRIGEGLALVDTVDIITPLVDDPFTFGRIA
AANALSDVYAMGGRPVTAMNLAFFPACTLPGQILADIMAGGLDAVREAGACLVGGHTVEDHELKYGLSVTGLISPGRIVR
NSTARPGDRLILTKPLGTGIVSTAIKADMVAPGVVDEAIRWMALLNASAAGLMLECEASACTDVTGFGLLGHACEMARGA
GVTLEIALDAVPLMGGVEDLVADGLVPAGCYRNRDHYTPLVSVSAGAGGRLIPLFDPQTSGGLLITLSPQFADSFLSMAR
DRGLFAVAVGGVLPPREHAVVIA
>Mature_343_residues
MIKLTSLVKAAG*AAKLGPAGLEDALSGILGKGDDPNLLVGPETADDAGVYRIGEGLALVDTVDIITPLVDDPFTFGRIA
AANALSDVYAMGGRPVTAMNLAFFPACTLPGQILADIMAGGLDAVREAGACLVGGHTVEDHELKYGLSVTGLISPGRIVR
NSTARPGDRLILTKPLGTGIVSTAIKADMVAPGVVDEAIRWMALLNASAAGLMLECEASACTDVTGFGLLGHACEMARGA
GVTLEIALDAVPLMGGVEDLVADGLVPAGCYRNRDHYTPLVSVSAGAGGRLIPLFDPQTSGGLLITLSPQFADSFLSMAR
DRGLFAVAVGGVLPPREHAVVIA

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=279, Percent_Identity=34.0501792114695, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI15011844, Length=281, Percent_Identity=32.7402135231317, Blast_Score=112, Evalue=3e-25,
Organism=Escherichia coli, GI1788062, Length=337, Percent_Identity=41.839762611276, Blast_Score=243, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17543426, Length=280, Percent_Identity=32.5, Blast_Score=127, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24653602, Length=314, Percent_Identity=28.9808917197452, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24653604, Length=314, Percent_Identity=28.9808917197452, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI28574119, Length=356, Percent_Identity=27.5280898876405, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574118, Length=278, Percent_Identity=28.7769784172662, Blast_Score=88, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 34818; Mature: 34818

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTSLVKAAGAAKLGPAGLEDALSGILGKGDDPNLLVGPETADDAGVYRIGEGLALVD
CEEHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCEEEEH
TVDIITPLVDDPFTFGRIAAANALSDVYAMGGRPVTAMNLAFFPACTLPGQILADIMAGG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC
LDAVREAGACLVGGHTVEDHELKYGLSVTGLISPGRIVRNSTARPGDRLILTKPLGTGIV
HHHHHHCCCEEECCCCCCCCCEEECCEEEEECCCCCEEECCCCCCCCEEEEECCCCCCHH
STAIKADMVAPGVVDEAIRWMALLNASAAGLMLECEASACTDVTGFGLLGHACEMARGAG
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
VTLEIALDAVPLMGGVEDLVADGLVPAGCYRNRDHYTPLVSVSAGAGGRLIPLFDPQTSG
CEEEEEEECCCCCCCHHHHHHCCCCCCCHHCCCCCCCCEEEEECCCCCEEEEEECCCCCC
GLLITLSPQFADSFLSMARDRGLFAVAVGGVLPPREHAVVIA
CEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEC
>Mature Secondary Structure
MIKLTSLVKAAGAAKLGPAGLEDALSGILGKGDDPNLLVGPETADDAGVYRIGEGLALVD
CEEHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCEEEEH
TVDIITPLVDDPFTFGRIAAANALSDVYAMGGRPVTAMNLAFFPACTLPGQILADIMAGG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCC
LDAVREAGACLVGGHTVEDHELKYGLSVTGLISPGRIVRNSTARPGDRLILTKPLGTGIV
HHHHHHCCCEEECCCCCCCCCEEECCEEEEECCCCCEEECCCCCCCCEEEEECCCCCCHH
STAIKADMVAPGVVDEAIRWMALLNASAAGLMLECEASACTDVTGFGLLGHACEMARGAG
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
VTLEIALDAVPLMGGVEDLVADGLVPAGCYRNRDHYTPLVSVSAGAGGRLIPLFDPQTSG
CEEEEEEECCCCCCCHHHHHHCCCCCCCHHCCCCCCCCEEEEECCCCCEEEEEECCCCCC
GLLITLSPQFADSFLSMARDRGLFAVAVGGVLPPREHAVVIA
CEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA