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The map label for this gene is wzxC [H]

Identifier: 78224084

GI number: 78224084

Start: 3268686

End: 3270170

Strand: Reverse

Name: wzxC [H]

Synonym: Gmet_2888

Alternate gene names: 78224084

Gene position: 3270170-3268686 (Counterclockwise)

Preceding gene: 78224085

Following gene: 78224083

Centisome position: 81.81

GC content: 55.69

Gene sequence:

>1485_bases
GTGACTGACCGCACGACTGACAATCAGCAGCAGGAGTTTCAAGAGCTGAAGAAAAAATCGCTTTCAGGGATGACGGCGCT
CTTTATCCGCCAGGTCCTGGTGAAGCTGATTTTTTTCGGGGGCAACATCGTCCTTGCCCGGCTCCTGGCGCCGCAGGTCT
TTGGAATCTACGCTATCGTCAACTTCGTCGTCACCTTTTTCTCTACCTTTGGCGATGTGGGGATAGGCGCGGCTCTGATC
CAGAAGAAAGGAGAGTTGAGTCGGGAAGAGCTCTCCACTACCTTCTGGCTGCAGCAGATGCTGGTCTGGAGTGTGGTGGC
GGTGGCGGTGCTGGCGGCGCCGTTGGCGCTGAGGGTCTATCCGACGCTTCCGCCGGTGGGGGTGTGGCTCATTCGGGCTA
TGGCGCTCAGCTTCTTCTTTTCTTCGCTGAAAACAATCCCGGCAATCCTGATGGAACGGGAGATCGACTTCAACCGGATT
GCCTGGGTAGATATTACCGAGAACCTGGCATTCCAAGGTGTAGCCATCACTGGCGCCTTCCTTGGCTGGGAGGCGTGGAG
CTTTGTGGCGGCGGCGGTGACGCGAGGGTTTCTTGGCGCGCTGCTGATCTACTCGCTGTCGTCGTGGCGGCCGAGCCTGC
ACTACCGGTTCGAGTCGGTGAAGGGGTTGGTGCGGTTCGGCCTGCCGTACCAGGGGAACCAGATTCTCAGCTTCATCAAG
GATGCTGTGACGCCATTGTTTGTCGGGGCGTATGCCGGGGCGGCGGCGGTGGGATACCTCAACTGGGCGAGGAACTTTGC
TTTCGTCCCTCTAGTTATCTCAGAAACCTTTGGCCGTGTGGCCTTCCCGGCGTTTTCCCAACTCCAAGACGATCGGGAGC
TTTTGGGGCACACCATCGAGAACTCGATCCGCATGATGACCTTTGTCATGCTCCCTGTCACCGGGATTTTTATCGCGCTT
GGGCCGGAGATAACGCACTATTTTTATACGGACAAATGGTTTCCCGCGATCAACGCGTTCTATCTCTTTTCGTGGGCGCC
ACTGATGATGGGTGTCACCCTGCCGATGTTCAGCGGGATATTGAGCATCGGGAAATCAAAAATTATCCTAGCAATGAGCT
TGGCGCTTATCGGGATTGAGTGGGGAATTGGCGCCCCGCTGGTGACACGAATCGGGTTCACCGGAGTCGCTGTTACCCAG
CCAATCTCCTACATAATCTTTACAGTGGTTTACAAGCATGTGCTTCGCCGTCAGCGGGTCAGGGTCAACGTCGTCAGGAA
CGCGTACCTTAACCTACTTATTGCTGCCTTGATGGCTGCAATTGTTTGGTATGCGAAGGGGGGGCTTGTTACATCTCTGC
CGGCGCTGGTGGCCTTTGCTGGGATGGGACTTGTCGTGTATCTCTTGTTATCGTTCATGTTAAATCGGGGGACACTAAAG
GAGTCCCTCCGTTACTTTCGCAAACTGAGAGAGCCAACATGCTAA

Upstream 100 bases:

>100_bases
GTTGTTACGTCACTAAAGCGCGGGGATGAACTGATTGAGGGACTAAAAAAGGCCGGTGTTAATGGTTGGCGGTTCATTGT
CGCTCCACGTGGGTGTTGAG

Downstream 100 bases:

>100_bases
ACGCACTCAAAAACAGGCTCCGCGTCTGGTACGACCCGGAGATGAAGGCGATTGCCAGGATCATCCGGGAGATGAACTCT
AAGGGTGGAGACGACCTTGT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTDRTTDNQQQEFQELKKKSLSGMTALFIRQVLVKLIFFGGNIVLARLLAPQVFGIYAIVNFVVTFFSTFGDVGIGAALI
QKKGELSREELSTTFWLQQMLVWSVVAVAVLAAPLALRVYPTLPPVGVWLIRAMALSFFFSSLKTIPAILMEREIDFNRI
AWVDITENLAFQGVAITGAFLGWEAWSFVAAAVTRGFLGALLIYSLSSWRPSLHYRFESVKGLVRFGLPYQGNQILSFIK
DAVTPLFVGAYAGAAAVGYLNWARNFAFVPLVISETFGRVAFPAFSQLQDDRELLGHTIENSIRMMTFVMLPVTGIFIAL
GPEITHYFYTDKWFPAINAFYLFSWAPLMMGVTLPMFSGILSIGKSKIILAMSLALIGIEWGIGAPLVTRIGFTGVAVTQ
PISYIIFTVVYKHVLRRQRVRVNVVRNAYLNLLIAALMAAIVWYAKGGLVTSLPALVAFAGMGLVVYLLLSFMLNRGTLK
ESLRYFRKLREPTC

Sequences:

>Translated_494_residues
MTDRTTDNQQQEFQELKKKSLSGMTALFIRQVLVKLIFFGGNIVLARLLAPQVFGIYAIVNFVVTFFSTFGDVGIGAALI
QKKGELSREELSTTFWLQQMLVWSVVAVAVLAAPLALRVYPTLPPVGVWLIRAMALSFFFSSLKTIPAILMEREIDFNRI
AWVDITENLAFQGVAITGAFLGWEAWSFVAAAVTRGFLGALLIYSLSSWRPSLHYRFESVKGLVRFGLPYQGNQILSFIK
DAVTPLFVGAYAGAAAVGYLNWARNFAFVPLVISETFGRVAFPAFSQLQDDRELLGHTIENSIRMMTFVMLPVTGIFIAL
GPEITHYFYTDKWFPAINAFYLFSWAPLMMGVTLPMFSGILSIGKSKIILAMSLALIGIEWGIGAPLVTRIGFTGVAVTQ
PISYIIFTVVYKHVLRRQRVRVNVVRNAYLNLLIAALMAAIVWYAKGGLVTSLPALVAFAGMGLVVYLLLSFMLNRGTLK
ESLRYFRKLREPTC
>Mature_493_residues
TDRTTDNQQQEFQELKKKSLSGMTALFIRQVLVKLIFFGGNIVLARLLAPQVFGIYAIVNFVVTFFSTFGDVGIGAALIQ
KKGELSREELSTTFWLQQMLVWSVVAVAVLAAPLALRVYPTLPPVGVWLIRAMALSFFFSSLKTIPAILMEREIDFNRIA
WVDITENLAFQGVAITGAFLGWEAWSFVAAAVTRGFLGALLIYSLSSWRPSLHYRFESVKGLVRFGLPYQGNQILSFIKD
AVTPLFVGAYAGAAAVGYLNWARNFAFVPLVISETFGRVAFPAFSQLQDDRELLGHTIENSIRMMTFVMLPVTGIFIALG
PEITHYFYTDKWFPAINAFYLFSWAPLMMGVTLPMFSGILSIGKSKIILAMSLALIGIEWGIGAPLVTRIGFTGVAVTQP
ISYIIFTVVYKHVLRRQRVRVNVVRNAYLNLLIAALMAAIVWYAKGGLVTSLPALVAFAGMGLVVYLLLSFMLNRGTLKE
SLRYFRKLREPTC

Specific function: Lipopolysaccharide biosynthesis. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=365, Percent_Identity=26.027397260274, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54966; Mature: 54835

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCC
>Mature Secondary Structure 
TDRTTDNQQQEFQELKKKSLSGMTALFIRQVLVKLIFFGGNIVLARLLAPQVFGIYAIV
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
NFVVTFFSTFGDVGIGAALIQKKGELSREELSTTFWLQQMLVWSVVAVAVLAAPLALRVY
HHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
PTLPPVGVWLIRAMALSFFFSSLKTIPAILMEREIDFNRIAWVDITENLAFQGVAITGAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHH
LGWEAWSFVAAAVTRGFLGALLIYSLSSWRPSLHYRFESVKGLVRFGLPYQGNQILSFIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DAVTPLFVGAYAGAAAVGYLNWARNFAFVPLVISETFGRVAFPAFSQLQDDRELLGHTIE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
NSIRMMTFVMLPVTGIFIALGPEITHYFYTDKWFPAINAFYLFSWAPLMMGVTLPMFSGI
HHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSIGKSKIILAMSLALIGIEWGIGAPLVTRIGFTGVAVTQPISYIIFTVVYKHVLRRQRV
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RVNVVRNAYLNLLIAALMAAIVWYAKGGLVTSLPALVAFAGMGLVVYLLLSFMLNRGTLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ESLRYFRKLREPTC
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]