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The map label for this gene is 78224085

Identifier: 78224085

GI number: 78224085

Start: 3270172

End: 3270780

Strand: Reverse

Name: 78224085

Synonym: Gmet_2889

Alternate gene names: NA

Gene position: 3270780-3270172 (Counterclockwise)

Preceding gene: 78224086

Following gene: 78224084

Centisome position: 81.82

GC content: 55.5

Gene sequence:

>609_bases
ATGAACGATAAGACCGATAAGGCGTTAGATTCCTACCGTTCCTTTCTCCTCCTCTCGGAAATCGCCGGCGAGGAGCCCCT
TTCCCAGCGGGAACTCTCCCGCCGGGCCGGCATTGCCGTCGGACTAGTGAACTCCTACCTAAAAAACCTCGTGGCCAAGG
GGTACGTCCGCGTCAAGAACTTCCCCCGCAACCGCTACGCCTACCTTCTTACCCCTACGGGGATCGCCGAAAAGAGCCGG
CTCGCCTACCAGCATCTCAGTTATTTTACCAATCTCTACACCGTTGCTCGGCAGGACTATCTGGCGTTGTTTCAGTCTCT
CAAGGCAGAGGGGGTGACGGAGGTTGTGTTCTGTGGGGTTGACGAGGTGGCGGAGATTGCGTACCTCTCACTGCGGGAAG
CGGGATTGGAGTTGGTCGCGGTTTTGGATGATCAAGGTCATGGGAATAGTTTTTTTGGGGTCAGGGTCATGCCCTTGATT
GTATGGGAGCAGCGGGGCAACGAGCCGATAGTTGTTACGTCACTAAAGCGCGGGGATGAACTGATTGAGGGACTAAAAAA
GGCCGGTGTTAATGGTTGGCGGTTCATTGTCGCTCCACGTGGGTGTTGA

Upstream 100 bases:

>100_bases
GGCATCTTGTGATCCTGCTCGCTGCACGTCGATGATGACGGTGTTCATAGTGTGAACATTCCTGTTGCTATTTCCCTTTG
ATTTCAGTAGTGTTCATTGT

Downstream 100 bases:

>100_bases
GGTGACTGACCGCACGACTGACAATCAGCAGCAGGAGTTTCAAGAGCTGAAGAAAAAATCGCTTTCAGGGATGACGGCGC
TCTTTATCCGCCAGGTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein IclR; MarR Family Transcriptional Regulator; AsnC Family Transcriptional Regulator

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNDKTDKALDSYRSFLLLSEIAGEEPLSQRELSRRAGIAVGLVNSYLKNLVAKGYVRVKNFPRNRYAYLLTPTGIAEKSR
LAYQHLSYFTNLYTVARQDYLALFQSLKAEGVTEVVFCGVDEVAEIAYLSLREAGLELVAVLDDQGHGNSFFGVRVMPLI
VWEQRGNEPIVVTSLKRGDELIEGLKKAGVNGWRFIVAPRGC

Sequences:

>Translated_202_residues
MNDKTDKALDSYRSFLLLSEIAGEEPLSQRELSRRAGIAVGLVNSYLKNLVAKGYVRVKNFPRNRYAYLLTPTGIAEKSR
LAYQHLSYFTNLYTVARQDYLALFQSLKAEGVTEVVFCGVDEVAEIAYLSLREAGLELVAVLDDQGHGNSFFGVRVMPLI
VWEQRGNEPIVVTSLKRGDELIEGLKKAGVNGWRFIVAPRGC
>Mature_202_residues
MNDKTDKALDSYRSFLLLSEIAGEEPLSQRELSRRAGIAVGLVNSYLKNLVAKGYVRVKNFPRNRYAYLLTPTGIAEKSR
LAYQHLSYFTNLYTVARQDYLALFQSLKAEGVTEVVFCGVDEVAEIAYLSLREAGLELVAVLDDQGHGNSFFGVRVMPLI
VWEQRGNEPIVVTSLKRGDELIEGLKKAGVNGWRFIVAPRGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22564; Mature: 22564

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKTDKALDSYRSFLLLSEIAGEEPLSQRELSRRAGIAVGLVNSYLKNLVAKGYVRVKN
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEC
FPRNRYAYLLTPTGIAEKSRLAYQHLSYFTNLYTVARQDYLALFQSLKAEGVTEVVFCGV
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECH
DEVAEIAYLSLREAGLELVAVLDDQGHGNSFFGVRVMPLIVWEQRGNEPIVVTSLKRGDE
HHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEHHEEEEEEEEECCCCCCEEEEECCCCHH
LIEGLKKAGVNGWRFIVAPRGC
HHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure
MNDKTDKALDSYRSFLLLSEIAGEEPLSQRELSRRAGIAVGLVNSYLKNLVAKGYVRVKN
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEC
FPRNRYAYLLTPTGIAEKSRLAYQHLSYFTNLYTVARQDYLALFQSLKAEGVTEVVFCGV
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECH
DEVAEIAYLSLREAGLELVAVLDDQGHGNSFFGVRVMPLIVWEQRGNEPIVVTSLKRGDE
HHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEHHEEEEEEEEECCCCCCEEEEECCCCHH
LIEGLKKAGVNGWRFIVAPRGC
HHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA