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The map label for this gene is yraN [C]

Identifier: 78224060

GI number: 78224060

Start: 3248978

End: 3249346

Strand: Reverse

Name: yraN [C]

Synonym: Gmet_2864

Alternate gene names: 78224060

Gene position: 3249346-3248978 (Counterclockwise)

Preceding gene: 78224061

Following gene: 78224059

Centisome position: 81.29

GC content: 54.2

Gene sequence:

>369_bases
ATGTCGCTCCATAACAAGTCCCTGGGCAGCAAGGGGGAATCCCTGGCGGTGACATATCTGGAACGTCATCGTTACAAAAT
CCTGGAGAGAAACTTTCGTTGCCGCGGCGGCGAGATAGATATTGTGGCTCGCGATGGCAAAACCATTGTCTTCGTGGAGG
TCAAGACGAGGACAAGCGGTCACTATGGACCACCGCAACTTGCAGTCACCTCCTTCAAGCAGCGGCAGATATCCAAGGCG
GCGCTTACCTGGCTTGCTAAGCAGCGGCAGCTTGACGCCTGCGCCCGCTTCGACGTCATATCGATTACGTTCTCGGGTCA
GATGCCACAAATCGAGCATATTCCCAATGCCTTCGAATTGGCGTATTAG

Upstream 100 bases:

>100_bases
GCCGAGCACAAGGGCTATGGCTGTGCCTCTCACCTTGCTGCGATTGCGGAACTGGGTCCATGCCCCATCCACCGGAAAAC
CTTCAGGGGGGTGAAAGAGC

Downstream 100 bases:

>100_bases
CCCGGAAATACCGTTGAAAACGGCAGTTTGCTATGCTACCTTTGACCGAAAAATCGGGGGCTTATACCGTGGATTTCATT
GTCGCACTGGCGCAGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSLHNKSLGSKGESLAVTYLERHRYKILERNFRCRGGEIDIVARDGKTIVFVEVKTRTSGHYGPPQLAVTSFKQRQISKA
ALTWLAKQRQLDACARFDVISITFSGQMPQIEHIPNAFELAY

Sequences:

>Translated_122_residues
MSLHNKSLGSKGESLAVTYLERHRYKILERNFRCRGGEIDIVARDGKTIVFVEVKTRTSGHYGPPQLAVTSFKQRQISKA
ALTWLAKQRQLDACARFDVISITFSGQMPQIEHIPNAFELAY
>Mature_121_residues
SLHNKSLGSKGESLAVTYLERHRYKILERNFRCRGGEIDIVARDGKTIVFVEVKTRTSGHYGPPQLAVTSFKQRQISKAA
LTWLAKQRQLDACARFDVISITFSGQMPQIEHIPNAFELAY

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=118, Percent_Identity=37.2881355932203, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2864_GEOMG (Q39RP2)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_385807.1
- ProteinModelPortal:   Q39RP2
- STRING:   Q39RP2
- GeneID:   3738921
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_2864
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- PhylomeDB:   Q39RP2
- ProtClustDB:   PRK14675
- BioCyc:   GMET269799:GMET_2864-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13839; Mature: 13708

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHNKSLGSKGESLAVTYLERHRYKILERNFRCRGGEIDIVARDGKTIVFVEVKTRTSG
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCC
HYGPPQLAVTSFKQRQISKAALTWLAKQRQLDACARFDVISITFSGQMPQIEHIPNAFEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHCCCEEEE
AY
CC
>Mature Secondary Structure 
SLHNKSLGSKGESLAVTYLERHRYKILERNFRCRGGEIDIVARDGKTIVFVEVKTRTSG
CCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEEECCCC
HYGPPQLAVTSFKQRQISKAALTWLAKQRQLDACARFDVISITFSGQMPQIEHIPNAFEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHCCCEEEE
AY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA