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The map label for this gene is 78224046

Identifier: 78224046

GI number: 78224046

Start: 3227845

End: 3228660

Strand: Reverse

Name: 78224046

Synonym: Gmet_2850

Alternate gene names: NA

Gene position: 3228660-3227845 (Counterclockwise)

Preceding gene: 78224047

Following gene: 78224045

Centisome position: 80.77

GC content: 64.34

Gene sequence:

>816_bases
ATGAAGCTTCTGTTTTTTTGGGTGGCAGCCGCTCTAATGCTCGGTGCTGGTGCCGGTTCAGCAGAGGTGTCTGCCCCGCT
CCACGAATCTGCCGGCAACGGGTACGCATCCCTGCGTGAAGGCCTTGTCACCCGCTTCGACGGCCGGACACCGAAGGAGT
GGGGCGAAACGGTAACGGGGGTCAAAACTCGCCTGGCGGGGGGCGACAAGAGCATTGCCTTGACCTTCGACGCCTGCGGC
AGTCCACGGGGCAAGGGGTTCGACGCACCCCTCATCGATTTTCTGGAGCGGGAGAGAATTCCTGCCACCCTCTTTGTGAG
TGGCCTCTGGATCGACGCGAATCCGGTGCTGTTCCGGCGCCTGGTGGCAAATCCCCTGTTCGAGATCGCCAACCACGGTT
ATCGGCACCGTCCCGCGTCGGTTGCGGGGCAAAAGGCATACGGCATTGCGGGAACCCGCACCGTGGGCGACGTGGTGGAC
GAGATCGAACTGAACGCCCGGCGGATCGAGGAGACCACGGGCAAGCGCCCCGCCTTCTACCGCTCGGGCACCGCCTACTA
CGACGAGGTGGCGGTAGAGATTGCCGCGGCCCTGGGAGAGCGGGTGGCCGGCTATTCCCTTCTCGGCGACGCGGGGGCGA
CCTTTTCTTCCCAGCAGGTGCGCGCTGCCCTCCTGAAGGCCCGACCGGGCGATATCGCCCTCCTCCATATGAATCATCCC
GAGTCGGGCACCGCCGCCGGGGTCATGGCAGCCATACCCGAGCTCCGAAAAAGGGGATTCCGGTTTGTGAAGCTCTCCGA
CGTGCCAGTGAAGTGA

Upstream 100 bases:

>100_bases
TACTGTAGCGGGTCGTCCTTTTCGGGAGCGGCCCGCTTTTTTCTTCACAGTTGCTGCGGTTGGGGCTAGGATTGCCGAAA
AATCGCATACGGGAGATGCT

Downstream 100 bases:

>100_bases
AGAGATATGCCTTGATTTGTCGCGCAGTTTTGGTTTAGAAAGATACCTTTCCACCCTTTCACAGAAAGTGATGCCCCCAT
GAAATCCCTGACGCTCAAGG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Lipoprotein; Polysaccharide Deacetylase Family Sporulation Protein PdaB; Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Protein; Deacetylase; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain Protein

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKLLFFWVAAALMLGAGAGSAEVSAPLHESAGNGYASLREGLVTRFDGRTPKEWGETVTGVKTRLAGGDKSIALTFDACG
SPRGKGFDAPLIDFLERERIPATLFVSGLWIDANPVLFRRLVANPLFEIANHGYRHRPASVAGQKAYGIAGTRTVGDVVD
EIELNARRIEETTGKRPAFYRSGTAYYDEVAVEIAAALGERVAGYSLLGDAGATFSSQQVRAALLKARPGDIALLHMNHP
ESGTAAGVMAAIPELRKRGFRFVKLSDVPVK

Sequences:

>Translated_271_residues
MKLLFFWVAAALMLGAGAGSAEVSAPLHESAGNGYASLREGLVTRFDGRTPKEWGETVTGVKTRLAGGDKSIALTFDACG
SPRGKGFDAPLIDFLERERIPATLFVSGLWIDANPVLFRRLVANPLFEIANHGYRHRPASVAGQKAYGIAGTRTVGDVVD
EIELNARRIEETTGKRPAFYRSGTAYYDEVAVEIAAALGERVAGYSLLGDAGATFSSQQVRAALLKARPGDIALLHMNHP
ESGTAAGVMAAIPELRKRGFRFVKLSDVPVK
>Mature_271_residues
MKLLFFWVAAALMLGAGAGSAEVSAPLHESAGNGYASLREGLVTRFDGRTPKEWGETVTGVKTRLAGGDKSIALTFDACG
SPRGKGFDAPLIDFLERERIPATLFVSGLWIDANPVLFRRLVANPLFEIANHGYRHRPASVAGQKAYGIAGTRTVGDVVD
EIELNARRIEETTGKRPAFYRSGTAYYDEVAVEIAAALGERVAGYSLLGDAGATFSSQQVRAALLKARPGDIALLHMNHP
ESGTAAGVMAAIPELRKRGFRFVKLSDVPVK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28987; Mature: 28987

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFFWVAAALMLGAGAGSAEVSAPLHESAGNGYASLREGLVTRFDGRTPKEWGETVTG
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
VKTRLAGGDKSIALTFDACGSPRGKGFDAPLIDFLERERIPATLFVSGLWIDANPVLFRR
HHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCHHHHHH
LVANPLFEIANHGYRHRPASVAGQKAYGIAGTRTVGDVVDEIELNARRIEETTGKRPAFY
HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
RSGTAYYDEVAVEIAAALGERVAGYSLLGDAGATFSSQQVRAALLKARPGDIALLHMNHP
CCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC
ESGTAAGVMAAIPELRKRGFRFVKLSDVPVK
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MKLLFFWVAAALMLGAGAGSAEVSAPLHESAGNGYASLREGLVTRFDGRTPKEWGETVTG
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
VKTRLAGGDKSIALTFDACGSPRGKGFDAPLIDFLERERIPATLFVSGLWIDANPVLFRR
HHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCHHHHHH
LVANPLFEIANHGYRHRPASVAGQKAYGIAGTRTVGDVVDEIELNARRIEETTGKRPAFY
HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
RSGTAYYDEVAVEIAAALGERVAGYSLLGDAGATFSSQQVRAALLKARPGDIALLHMNHP
CCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC
ESGTAAGVMAAIPELRKRGFRFVKLSDVPVK
CCCCHHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA