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The map label for this gene is 78224000

Identifier: 78224000

GI number: 78224000

Start: 3167300

End: 3167881

Strand: Reverse

Name: 78224000

Synonym: Gmet_2804

Alternate gene names: NA

Gene position: 3167881-3167300 (Counterclockwise)

Preceding gene: 78224001

Following gene: 78223998

Centisome position: 79.25

GC content: 67.7

Gene sequence:

>582_bases
ATGAAACGTATCTGCGTCTTCTGCGGTTCCAGCCCCGGCAGGAACCCCGTCTATCGCGCCGCCGCCGAGGCGATGGGCCG
GCTTCTGGCCCGGGAGGGGATCGGCCTCGTCTACGGCGGGTCGAGTATCGGCCTCATGACGGCCGCGGCCGACGCGGCCC
TGGCAGCCGGCGGCGAGGTGATCGGCGTCATCCCCCGCTGCCTGGAGGCCAAGGAGATCGCCCACCCCGGGCTCTCGGCC
CTCCACGTGGTGGAGACCATGCATGAGCGCAAGGCCCTCATGGCCGGGCTGGCCGACGGCTTTGTCGCCCTTCCCGGCGG
CATGGGGACTTTCGACGAGTTTTTCGAAGTGGTCACCTGGGCACAGCTCGGCATCCACGCCAAGCCGTACGGCCTCTTGA
ACGTGGCGGGGTACTACGACCGGCTGACCGCGTTTCTCGATCACACCGTGGCCGAGGGATTCGTCAAGAAGGAGCTCCGG
GAGATGATCGTCGTGGAAGAACGCCCCGATGCGCTGCTAGAGCGCTTCCGCGCCTACCGGCCGCCGGTGGCGGAAAAGTG
GCTCGATCTGGGAAGGGTGTGA

Upstream 100 bases:

>100_bases
CGGTACGCATTCCACGACGCGCTCCGGACGCCGATTCTCAGGAACCGGCTCGGCGATTCGGCCGGCGTCATCGGCGCCGC
GTGGATCGGGAGGTGACACC

Downstream 100 bases:

>100_bases
GCTAGAAATCCAGCGGGCTTTTCGCCTCCTTCACCGTCCGGACCGGCACGCAGTGGGTATAGATCATGGTTGTTTTGAGG
CTTGCGTGTCCCAGCTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKRICVFCGSSPGRNPVYRAAAEAMGRLLAREGIGLVYGGSSIGLMTAAADAALAAGGEVIGVIPRCLEAKEIAHPGLSA
LHVVETMHERKALMAGLADGFVALPGGMGTFDEFFEVVTWAQLGIHAKPYGLLNVAGYYDRLTAFLDHTVAEGFVKKELR
EMIVVEERPDALLERFRAYRPPVAEKWLDLGRV

Sequences:

>Translated_193_residues
MKRICVFCGSSPGRNPVYRAAAEAMGRLLAREGIGLVYGGSSIGLMTAAADAALAAGGEVIGVIPRCLEAKEIAHPGLSA
LHVVETMHERKALMAGLADGFVALPGGMGTFDEFFEVVTWAQLGIHAKPYGLLNVAGYYDRLTAFLDHTVAEGFVKKELR
EMIVVEERPDALLERFRAYRPPVAEKWLDLGRV
>Mature_193_residues
MKRICVFCGSSPGRNPVYRAAAEAMGRLLAREGIGLVYGGSSIGLMTAAADAALAAGGEVIGVIPRCLEAKEIAHPGLSA
LHVVETMHERKALMAGLADGFVALPGGMGTFDEFFEVVTWAQLGIHAKPYGLLNVAGYYDRLTAFLDHTVAEGFVKKELR
EMIVVEERPDALLERFRAYRPPVAEKWLDLGRV

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=220, Percent_Identity=37.2727272727273, Blast_Score=148, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20830; Mature: 20830

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRICVFCGSSPGRNPVYRAAAEAMGRLLAREGIGLVYGGSSIGLMTAAADAALAAGGEV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCHH
IGVIPRCLEAKEIAHPGLSALHVVETMHERKALMAGLADGFVALPGGMGTFDEFFEVVTW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHH
AQLGIHAKPYGLLNVAGYYDRLTAFLDHTVAEGFVKKELREMIVVEERPDALLERFRAYR
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PPVAEKWLDLGRV
CCHHHHHHHHCCC
>Mature Secondary Structure
MKRICVFCGSSPGRNPVYRAAAEAMGRLLAREGIGLVYGGSSIGLMTAAADAALAAGGEV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCHH
IGVIPRCLEAKEIAHPGLSALHVVETMHERKALMAGLADGFVALPGGMGTFDEFFEVVTW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHH
AQLGIHAKPYGLLNVAGYYDRLTAFLDHTVAEGFVKKELREMIVVEERPDALLERFRAYR
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PPVAEKWLDLGRV
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]