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The map label for this gene is glgC

Identifier: 78223964

GI number: 78223964

Start: 3129401

End: 3130639

Strand: Reverse

Name: glgC

Synonym: Gmet_2768

Alternate gene names: 78223964

Gene position: 3130639-3129401 (Counterclockwise)

Preceding gene: 78223965

Following gene: 78223963

Centisome position: 78.32

GC content: 57.95

Gene sequence:

>1239_bases
ATGTATGTAACGGGCAATCTTGCGGGGAACACGATAGCGATGGTTCTGGCGGGAGGAAAGGGAGAGCGGCTTGCCCCCCT
TACCCTGAGGCGGCCGAAGCCGGGCGTGGCCTTTGGCGGGAAGTACAAGATCATCGATTTCGTTCTGAGCAACATGTTCA
ACTCGGGGATCAAGAAGGTCTACATCCTGACCCAGTACCGGGCGTACTCCCTCATGAAGCACATCCGGGAATCATGGGGG
AAATGGGCCGGTCTCGGCGAGTTCTTCGTGGCCATATCGCCGGAGACGAGCAGCGAGAGCGAGGAGTGGTTCAAGGGGAC
CGCCGACGCCATCAACCACTACCTGCGGTTCATCGAATCGTCGGATGCGGACTATGTGGCCATTTTCGGCGGTGACCACA
TCTACCGGATGGATGTCAGCCAGATGATCGGGTACCATCGGAGGAACCGGGCCGATATCACCATTGCCGCCCTTGAGGTG
CCCGTGGAGGAGGCGAGGAGGTTCGGGGTCTTTTGCGTGGACGACGATAACCGGGTGACGGCATTCGAGGAGAAGCCGGC
CAATCCGGTCACCATCCCCGGGCGGGAAACCTGCTTTGCCTCCATGGGCAACTACATCTTTTCAACAAGAAGGCTCATCG
AGGTTCTGCAGGAGGGGAAGAAGCTCCATGCCGATCTCGATTTCGGCAAGCACGTGATCCCCATGATGCTTGCAAAAAAG
GACCGGGTCTTTGCCTATAACTTCAACGACAACCTGATCCCCGGCATGAAGCCCGAGGAAAGGGGGTACTGGAAGGATGT
GGGGACCATCGATTCCTACTACGAGGCCAACATGGAGCTGATCCATGTCTCCCCGCAACTGAATCTCTATAACTACAAGT
GGCCCATCCTGACCAACCAGGGGAATTACCCGCCGGCAAAGACGGTGTTCGACGAGGATGGCCGCCGTGGCATGAACATC
GACTCCTACGTCTGCGCCGGCTGCATAACCAGCGGGAGCGTCGTGCGCCGGTCCATCGTTGGCCCGCTCACCAAGGTCAA
CAGTTACAGCCTCGTGGAGGACTCGATCCTCTTCGAGAACGTCAACGTCGGCAGGAACGTGAAGATAAGAAGGGCGATCA
TAGACAAGAACATCACCATTCCCGACGGGACCACTATAGGATATGACCACGGGGAAGACCGCCGCAGAGGCTATACCGTG
ACCGAATCCGGCATCGTTGTGGTATCGCCGGCCGAGTAG

Upstream 100 bases:

>100_bases
GGAGCGGGTCCCTGATGGGCTCCTCCGGCAAACCCGGCGATTGACCGTATTATGGCGAGCAGTTCATGTGTATTTTAATT
GGAGGAAGGAGGGTACCATT

Downstream 100 bases:

>100_bases
AGGGAAATAAACACCGACAGGAGCATTATTCGATGATTCAGAAGAAGAGAGGCAAGACAGTACATATCCCAGGGCTTACC
GACCTTCCCCCCCTGCCGCG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MYVTGNLAGNTIAMVLAGGKGERLAPLTLRRPKPGVAFGGKYKIIDFVLSNMFNSGIKKVYILTQYRAYSLMKHIRESWG
KWAGLGEFFVAISPETSSESEEWFKGTADAINHYLRFIESSDADYVAIFGGDHIYRMDVSQMIGYHRRNRADITIAALEV
PVEEARRFGVFCVDDDNRVTAFEEKPANPVTIPGRETCFASMGNYIFSTRRLIEVLQEGKKLHADLDFGKHVIPMMLAKK
DRVFAYNFNDNLIPGMKPEERGYWKDVGTIDSYYEANMELIHVSPQLNLYNYKWPILTNQGNYPPAKTVFDEDGRRGMNI
DSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSILFENVNVGRNVKIRRAIIDKNITIPDGTTIGYDHGEDRRRGYTV
TESGIVVVSPAE

Sequences:

>Translated_412_residues
MYVTGNLAGNTIAMVLAGGKGERLAPLTLRRPKPGVAFGGKYKIIDFVLSNMFNSGIKKVYILTQYRAYSLMKHIRESWG
KWAGLGEFFVAISPETSSESEEWFKGTADAINHYLRFIESSDADYVAIFGGDHIYRMDVSQMIGYHRRNRADITIAALEV
PVEEARRFGVFCVDDDNRVTAFEEKPANPVTIPGRETCFASMGNYIFSTRRLIEVLQEGKKLHADLDFGKHVIPMMLAKK
DRVFAYNFNDNLIPGMKPEERGYWKDVGTIDSYYEANMELIHVSPQLNLYNYKWPILTNQGNYPPAKTVFDEDGRRGMNI
DSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSILFENVNVGRNVKIRRAIIDKNITIPDGTTIGYDHGEDRRRGYTV
TESGIVVVSPAE
>Mature_412_residues
MYVTGNLAGNTIAMVLAGGKGERLAPLTLRRPKPGVAFGGKYKIIDFVLSNMFNSGIKKVYILTQYRAYSLMKHIRESWG
KWAGLGEFFVAISPETSSESEEWFKGTADAINHYLRFIESSDADYVAIFGGDHIYRMDVSQMIGYHRRNRADITIAALEV
PVEEARRFGVFCVDDDNRVTAFEEKPANPVTIPGRETCFASMGNYIFSTRRLIEVLQEGKKLHADLDFGKHVIPMMLAKK
DRVFAYNFNDNLIPGMKPEERGYWKDVGTIDSYYEANMELIHVSPQLNLYNYKWPILTNQGNYPPAKTVFDEDGRRGMNI
DSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSILFENVNVGRNVKIRRAIIDKNITIPDGTTIGYDHGEDRRRGYTV
TESGIVVVSPAE

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family

Homologues:

Organism=Homo sapiens, GI11761621, Length=368, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI11761619, Length=363, Percent_Identity=26.4462809917355, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1789837, Length=412, Percent_Identity=40.0485436893204, Blast_Score=327, Evalue=1e-90,
Organism=Drosophila melanogaster, GI21355443, Length=378, Percent_Identity=26.7195767195767, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24644084, Length=378, Percent_Identity=26.7195767195767, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGC_GEOMG (Q39RY8)

Other databases:

- EMBL:   CP000148
- RefSeq:   YP_385711.1
- ProteinModelPortal:   Q39RY8
- SMR:   Q39RY8
- STRING:   Q39RY8
- GeneID:   3740248
- GenomeReviews:   CP000148_GR
- KEGG:   gme:Gmet_2768
- NMPDR:   fig|269799.3.peg.2746
- eggNOG:   COG0448
- HOGENOM:   HBG703946
- OMA:   GTVDAYW
- PhylomeDB:   Q39RY8
- ProtClustDB:   PRK00725
- BioCyc:   GMET269799:GMET_2768-MONOMER
- HAMAP:   MF_00624
- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004
- TIGRFAMs:   TIGR02091

Pfam domain/function: PF00483 NTP_transferase; SSF51161 Trimer_LpxA_like

EC number: =2.7.7.27

Molecular weight: Translated: 46342; Mature: 46342

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1; PS00809 ADP_GLC_PYROPHOSPH_2; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVTGNLAGNTIAMVLAGGKGERLAPLTLRRPKPGVAFGGKYKIIDFVLSNMFNSGIKKV
CEEECCCCCCEEEEEEECCCCCEECCEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEE
YILTQYRAYSLMKHIRESWGKWAGLGEFFVAISPETSSESEEWFKGTADAINHYLRFIES
EEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHCC
SDADYVAIFGGDHIYRMDVSQMIGYHRRNRADITIAALEVPVEEARRFGVFCVDDDNRVT
CCCCEEEEECCCEEEEEEHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCEEEECCCCCEE
AFEEKPANPVTIPGRETCFASMGNYIFSTRRLIEVLQEGKKLHADLDFGKHVIPMMLAKK
EECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC
DRVFAYNFNDNLIPGMKPEERGYWKDVGTIDSYYEANMELIHVSPQLNLYNYKWPILTNQ
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCEEEEEECCEEECC
GNYPPAKTVFDEDGRRGMNIDSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSILFEN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHEEEEC
VNVGRNVKIRRAIIDKNITIPDGTTIGYDHGEDRRRGYTVTESGIVVVSPAE
CCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCEEEECCCEEEEECCC
>Mature Secondary Structure
MYVTGNLAGNTIAMVLAGGKGERLAPLTLRRPKPGVAFGGKYKIIDFVLSNMFNSGIKKV
CEEECCCCCCEEEEEEECCCCCEECCEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEE
YILTQYRAYSLMKHIRESWGKWAGLGEFFVAISPETSSESEEWFKGTADAINHYLRFIES
EEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHCC
SDADYVAIFGGDHIYRMDVSQMIGYHRRNRADITIAALEVPVEEARRFGVFCVDDDNRVT
CCCCEEEEECCCEEEEEEHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCEEEECCCCCEE
AFEEKPANPVTIPGRETCFASMGNYIFSTRRLIEVLQEGKKLHADLDFGKHVIPMMLAKK
EECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC
DRVFAYNFNDNLIPGMKPEERGYWKDVGTIDSYYEANMELIHVSPQLNLYNYKWPILTNQ
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCEEEEEECCEEECC
GNYPPAKTVFDEDGRRGMNIDSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSILFEN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEHHHEEEEC
VNVGRNVKIRRAIIDKNITIPDGTTIGYDHGEDRRRGYTVTESGIVVVSPAE
CCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCCCCCEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA