| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is glgP [H]
Identifier: 78223963
GI number: 78223963
Start: 3126861
End: 3129368
Strand: Reverse
Name: glgP [H]
Synonym: Gmet_2767
Alternate gene names: 78223963
Gene position: 3129368-3126861 (Counterclockwise)
Preceding gene: 78223964
Following gene: 78223962
Centisome position: 78.28
GC content: 64.31
Gene sequence:
>2508_bases ATGATTCAGAAGAAGAGAGGCAAGACAGTACATATCCCAGGGCTTACCGACCTTCCCCCCCTGCCGCGGGACGTGCCGAG CCTGATGGAGGATTTTCGCCACTACTATACCTACAACCTGGGGCGCGACAAGTTCTGCCGGTCGGTCCACTACCACTACA AGGCCCTGGCCCTCGCGGTCCGGGACCGCCTCATGGAGGACTGGAAGAACACCCGCTACGCCTACCTGGATGCCGACTGC AAGCGGGGCTACTACCTGTCGCTGGAGTTCCTCATGGGACGCGCCCTCGGCAATGCCATGCTGAACCTCGGCGTTACCGA TACCGCGGCAAAGGCCCTCATGGACCTGGGCATCGCCATGGAAGACCTGGCTGAGGCGGAAGTCGACGCCGGCCTCGGCA ACGGCGGCCTGGGGCGCCTGGCGGCCTGCTTCCTCGACAGCTGCGCCACCCTGCAGCTGCCGGTCATGGGGTACGGCATC CGGTACGAGTACGGGATGTTCCGGCAGCGGATCGTGAACGGCCACCAGGTGGAGGAGCCGGACCACTGGCTGCGCAACGG CAACCCCTGGGAGATCGAGCGCCAGGAGTACACCCAGCGGGTCTGCTACGGGGGGCGCACCGAGCGCTACGGGACCGGTG ACGGCGGTTTCCGCGTCCGGTGGGTGGATACCCATGACGTGCTGGCCATTCCCTACGATACGCCGGTGCCGGGGTACAGC AACGGCACGGTCAATACCCTGCGGCTCTGGAAGTCGGTCGCCACCGACGCCTTCAACCTGGTTGAATTCAATGCCGGCAG CTACACCGAGTCGGTCGCCGCCAAGAACGAGGCGGAGAACATCACCATGGTGCTCTACCCCAACGACGCCAGCGAGAGCG GCAAGGCGCTGCGGCTGCGCCAGCAGTATTTCCTGGCGTCGGCCAGCCTCCAGGATGTCATTGAACGCTGGGTCGTGATC AGCAAGGGGGATTTCAGCGGTTTTGCCGAGAAGAACTGTTTCCAGCTGAACGACACCCACCCCAGCTGCGCCGTGCCGGA GTTGATGCGCCTCCTCATGGACGAGCAGGGGATGGGGTGGGACGAGGCGTGGGGGATCACCACCCGCACCATGGCCTACA CAAACCACACCCTCCTTCCCGAGGCTCTGGAGAAGTGGCCCCTCTCCCTGTTCGCCCAGCTTCTGCCGCGCCTTCTGGAA ATCATCCTGGAGATCAACGCCCGCTTCCTGGCCGAGGTCGCCAGCCGCTGGCCCGGCGACCATGAGCGGCTCCGGCGCAT GTCCCTCATCGAGGAGGGGCCGGTGCCCCAGGTCCGGATGGCCTACCTGGCCATTGTCGGCAGCTTTTCCGTTAACGGGG TCGCCGCCCTCCACTCCCAGCTCCTTGCCCAGGGGCTCTTCCGGGACTTCCATGAGCTCTGGCCCCACAAATTCAACAAC AAGACCAACGGGGTCACGCCACGCCGCTGGCTCGCCTGGTGCAATCCGGGCCTGAGCCGGCTCATAACCGAGACCATCGG CGACGGCTGGGTTTCAGACCTCTCCCGGATCGGGAAGATCGCCGCTTTCGCCGACGATCCCGGCTTCCGGGAGAAGTGGC GGGAGGTGAAGCGGGCCAACAAGGAGCGGCTGGCGGCCATGGTTCTGGACAAGTGCTGTGTCGCCTTCGACCCGGAGGCC CTCTTCGACGTGCAGGTGAAGCGGATCCACGAGTACAAGCGCCAGCTCCTCAACATCCTCCACGTCATCCATCTCTATGA CCGGATCAAGCGCGGCGACACCGAGGGGTGGACCAACCGGTGCGTCCTCATCGGCGGCAAGGCGGCCCCCGGCTACTTCA TGGCTAAGCTCATCATCAAGCTCACCAGCAACGTGGCCCAGGTGGTGAACGCCGACCCCCAGGTGGGGGACCGGCTCAAA GTGGCGTTCCTCCCCAACTACCGGGTAACGGCCATGGAGGTCGTCTGTCCCGGCACCGACTTGTCGGAGCAGATTTCCAC CGCCGGCAAGGAGGCATCGGGCACCGGCAACATGAAGTTCATGATGAACGGCGCCCTGACCATCGGCACCCTCGATGGAG CCAATATCGAAATCCGGGAAGAGGTGGGGGACGCAAATTTCTTCATGTTCGGTCTCACCGCCGAGGAGGTGGAGGCGGCG CGCAGGGGGTACGACCCCGGTGCCATCATTGAAGCCGACGCTGATCTCGGGCGGGTAATGAACCTGCTGGCGTTTGGCCA CTTCAACCTGTTCGAGCCGGGGATCTTCGATCCGATCATCGGTGCAATCACCAGTCCCCATGATCCCTGGATGGTCGCCG CCGACTTCCGCAGCTACGTCAACGCCCAGCAGAGGGTCGCCGCCGCCTACCGGGACCGGGAGCAGTGGGCCCGTATGAGC ATCATCAACAGCGCCTCCAGTGGCAAGTTCTCCACCGACCGGACCATCCGGGAGTACAACGACGGTATCTGGGGGCTCCA GCCTGTGCCGGTACTTGCTGCAAGGTAA
Upstream 100 bases:
>100_bases GGGAAGACCGCCGCAGAGGCTATACCGTGACCGAATCCGGCATCGTTGTGGTATCGCCGGCCGAGTAGAGGGAAATAAAC ACCGACAGGAGCATTATTCG
Downstream 100 bases:
>100_bases CCGGACCTGCTTTTTGTAATGTGAGAGAGAGGTGTCCCCTATGGAAATAAAGGTTCCGTCAGTGGGCGAATCGGTCTACG AGGCACTGGTGGGGAAGTGG
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MIQKKRGKTVHIPGLTDLPPLPRDVPSLMEDFRHYYTYNLGRDKFCRSVHYHYKALALAVRDRLMEDWKNTRYAYLDADC KRGYYLSLEFLMGRALGNAMLNLGVTDTAAKALMDLGIAMEDLAEAEVDAGLGNGGLGRLAACFLDSCATLQLPVMGYGI RYEYGMFRQRIVNGHQVEEPDHWLRNGNPWEIERQEYTQRVCYGGRTERYGTGDGGFRVRWVDTHDVLAIPYDTPVPGYS NGTVNTLRLWKSVATDAFNLVEFNAGSYTESVAAKNEAENITMVLYPNDASESGKALRLRQQYFLASASLQDVIERWVVI SKGDFSGFAEKNCFQLNDTHPSCAVPELMRLLMDEQGMGWDEAWGITTRTMAYTNHTLLPEALEKWPLSLFAQLLPRLLE IILEINARFLAEVASRWPGDHERLRRMSLIEEGPVPQVRMAYLAIVGSFSVNGVAALHSQLLAQGLFRDFHELWPHKFNN KTNGVTPRRWLAWCNPGLSRLITETIGDGWVSDLSRIGKIAAFADDPGFREKWREVKRANKERLAAMVLDKCCVAFDPEA LFDVQVKRIHEYKRQLLNILHVIHLYDRIKRGDTEGWTNRCVLIGGKAAPGYFMAKLIIKLTSNVAQVVNADPQVGDRLK VAFLPNYRVTAMEVVCPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEIREEVGDANFFMFGLTAEEVEAA RRGYDPGAIIEADADLGRVMNLLAFGHFNLFEPGIFDPIIGAITSPHDPWMVAADFRSYVNAQQRVAAAYRDREQWARMS IINSASSGKFSTDRTIREYNDGIWGLQPVPVLAAR
Sequences:
>Translated_835_residues MIQKKRGKTVHIPGLTDLPPLPRDVPSLMEDFRHYYTYNLGRDKFCRSVHYHYKALALAVRDRLMEDWKNTRYAYLDADC KRGYYLSLEFLMGRALGNAMLNLGVTDTAAKALMDLGIAMEDLAEAEVDAGLGNGGLGRLAACFLDSCATLQLPVMGYGI RYEYGMFRQRIVNGHQVEEPDHWLRNGNPWEIERQEYTQRVCYGGRTERYGTGDGGFRVRWVDTHDVLAIPYDTPVPGYS NGTVNTLRLWKSVATDAFNLVEFNAGSYTESVAAKNEAENITMVLYPNDASESGKALRLRQQYFLASASLQDVIERWVVI SKGDFSGFAEKNCFQLNDTHPSCAVPELMRLLMDEQGMGWDEAWGITTRTMAYTNHTLLPEALEKWPLSLFAQLLPRLLE IILEINARFLAEVASRWPGDHERLRRMSLIEEGPVPQVRMAYLAIVGSFSVNGVAALHSQLLAQGLFRDFHELWPHKFNN KTNGVTPRRWLAWCNPGLSRLITETIGDGWVSDLSRIGKIAAFADDPGFREKWREVKRANKERLAAMVLDKCCVAFDPEA LFDVQVKRIHEYKRQLLNILHVIHLYDRIKRGDTEGWTNRCVLIGGKAAPGYFMAKLIIKLTSNVAQVVNADPQVGDRLK VAFLPNYRVTAMEVVCPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEIREEVGDANFFMFGLTAEEVEAA RRGYDPGAIIEADADLGRVMNLLAFGHFNLFEPGIFDPIIGAITSPHDPWMVAADFRSYVNAQQRVAAAYRDREQWARMS IINSASSGKFSTDRTIREYNDGIWGLQPVPVLAAR >Mature_835_residues MIQKKRGKTVHIPGLTDLPPLPRDVPSLMEDFRHYYTYNLGRDKFCRSVHYHYKALALAVRDRLMEDWKNTRYAYLDADC KRGYYLSLEFLMGRALGNAMLNLGVTDTAAKALMDLGIAMEDLAEAEVDAGLGNGGLGRLAACFLDSCATLQLPVMGYGI RYEYGMFRQRIVNGHQVEEPDHWLRNGNPWEIERQEYTQRVCYGGRTERYGTGDGGFRVRWVDTHDVLAIPYDTPVPGYS NGTVNTLRLWKSVATDAFNLVEFNAGSYTESVAAKNEAENITMVLYPNDASESGKALRLRQQYFLASASLQDVIERWVVI SKGDFSGFAEKNCFQLNDTHPSCAVPELMRLLMDEQGMGWDEAWGITTRTMAYTNHTLLPEALEKWPLSLFAQLLPRLLE IILEINARFLAEVASRWPGDHERLRRMSLIEEGPVPQVRMAYLAIVGSFSVNGVAALHSQLLAQGLFRDFHELWPHKFNN KTNGVTPRRWLAWCNPGLSRLITETIGDGWVSDLSRIGKIAAFADDPGFREKWREVKRANKERLAAMVLDKCCVAFDPEA LFDVQVKRIHEYKRQLLNILHVIHLYDRIKRGDTEGWTNRCVLIGGKAAPGYFMAKLIIKLTSNVAQVVNADPQVGDRLK VAFLPNYRVTAMEVVCPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEIREEVGDANFFMFGLTAEEVEAA RRGYDPGAIIEADADLGRVMNLLAFGHFNLFEPGIFDPIIGAITSPHDPWMVAADFRSYVNAQQRVAAAYRDREQWARMS IINSASSGKFSTDRTIREYNDGIWGLQPVPVLAAR
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=834, Percent_Identity=52.6378896882494, Blast_Score=840, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=836, Percent_Identity=51.9138755980861, Blast_Score=815, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=834, Percent_Identity=51.0791366906475, Blast_Score=803, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=834, Percent_Identity=48.9208633093525, Blast_Score=751, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=53.5928143712575, Blast_Score=730, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=816, Percent_Identity=48.0392156862745, Blast_Score=772, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=769, Percent_Identity=47.074122236671, Blast_Score=717, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=832, Percent_Identity=52.2836538461538, Blast_Score=842, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=832, Percent_Identity=52.2836538461538, Blast_Score=842, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=814, Percent_Identity=46.5601965601966, Blast_Score=708, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=832, Percent_Identity=51.3221153846154, Blast_Score=823, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=832, Percent_Identity=51.3221153846154, Blast_Score=823, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93834; Mature: 93834
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKKRGKTVHIPGLTDLPPLPRDVPSLMEDFRHYYTYNLGRDKFCRSVHYHYKALALAV CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RDRLMEDWKNTRYAYLDADCKRGYYLSLEFLMGRALGNAMLNLGVTDTAAKALMDLGIAM HHHHHHHHCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHH EDLAEAEVDAGLGNGGLGRLAACFLDSCATLQLPVMGYGIRYEYGMFRQRIVNGHQVEEP HHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHCCCCEEEHHHHHHHHHCCCCCCCCC DHWLRNGNPWEIERQEYTQRVCYGGRTERYGTGDGGFRVRWVDTHDVLAIPYDTPVPGYS HHHHCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCC NGTVNTLRLWKSVATDAFNLVEFNAGSYTESVAAKNEAENITMVLYPNDASESGKALRLR CCCHHHHHHHHHHHHCHHHEEEECCCCCHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH QQYFLASASLQDVIERWVVISKGDFSGFAEKNCFQLNDTHPSCAVPELMRLLMDEQGMGW HHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCC DEAWGITTRTMAYTNHTLLPEALEKWPLSLFAQLLPRLLEIILEINARFLAEVASRWPGD HHHCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HERLRRMSLIEEGPVPQVRMAYLAIVGSFSVNGVAALHSQLLAQGLFRDFHELWPHKFNN HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCC KTNGVTPRRWLAWCNPGLSRLITETIGDGWVSDLSRIGKIAAFADDPGFREKWREVKRAN CCCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH KERLAAMVLDKCCVAFDPEALFDVQVKRIHEYKRQLLNILHVIHLYDRIKRGDTEGWTNR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE CVLIGGKAAPGYFMAKLIIKLTSNVAQVVNADPQVGDRLKVAFLPNYRVTAMEVVCPGTD EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCC LSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEIREEVGDANFFMFGLTAEEVEAA HHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCEEEHHHCCCCCEEEEECCHHHHHHH RRGYDPGAIIEADADLGRVMNLLAFGHFNLFEPGIFDPIIGAITSPHDPWMVAADFRSYV HCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHH NAQQRVAAAYRDREQWARMSIINSASSGKFSTDRTIREYNDGIWGLQPVPVLAAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQKKRGKTVHIPGLTDLPPLPRDVPSLMEDFRHYYTYNLGRDKFCRSVHYHYKALALAV CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RDRLMEDWKNTRYAYLDADCKRGYYLSLEFLMGRALGNAMLNLGVTDTAAKALMDLGIAM HHHHHHHHCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHH EDLAEAEVDAGLGNGGLGRLAACFLDSCATLQLPVMGYGIRYEYGMFRQRIVNGHQVEEP HHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHCCCCEEEHHHHHHHHHCCCCCCCCC DHWLRNGNPWEIERQEYTQRVCYGGRTERYGTGDGGFRVRWVDTHDVLAIPYDTPVPGYS HHHHCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCC NGTVNTLRLWKSVATDAFNLVEFNAGSYTESVAAKNEAENITMVLYPNDASESGKALRLR CCCHHHHHHHHHHHHCHHHEEEECCCCCHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH QQYFLASASLQDVIERWVVISKGDFSGFAEKNCFQLNDTHPSCAVPELMRLLMDEQGMGW HHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCC DEAWGITTRTMAYTNHTLLPEALEKWPLSLFAQLLPRLLEIILEINARFLAEVASRWPGD HHHCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HERLRRMSLIEEGPVPQVRMAYLAIVGSFSVNGVAALHSQLLAQGLFRDFHELWPHKFNN HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCC KTNGVTPRRWLAWCNPGLSRLITETIGDGWVSDLSRIGKIAAFADDPGFREKWREVKRAN CCCCCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH KERLAAMVLDKCCVAFDPEALFDVQVKRIHEYKRQLLNILHVIHLYDRIKRGDTEGWTNR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE CVLIGGKAAPGYFMAKLIIKLTSNVAQVVNADPQVGDRLKVAFLPNYRVTAMEVVCPGTD EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCC LSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEIREEVGDANFFMFGLTAEEVEAA HHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCEEEHHHCCCCCEEEEECCHHHHHHH RRGYDPGAIIEADADLGRVMNLLAFGHFNLFEPGIFDPIIGAITSPHDPWMVAADFRSYV HCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHH NAQQRVAAAYRDREQWARMSIINSASSGKFSTDRTIREYNDGIWGLQPVPVLAAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]