| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223939
Identifier: 78223939
GI number: 78223939
Start: 3101750
End: 3102808
Strand: Direct
Name: 78223939
Synonym: Gmet_2743
Alternate gene names: NA
Gene position: 3101750-3102808 (Clockwise)
Preceding gene: 78223938
Following gene: 78223972
Centisome position: 77.59
GC content: 56.47
Gene sequence:
>1059_bases ATGAAGGGGTTTATTAAGCTGTTTTTCGCCGCAATCGTTCTTTGCGTTTTAGTCGTCGGATGCGGGAGCGGAGGGGGTGG GGGAGGAGTCACCGCCATCGATCTCATTCGGCCCGAAATATCCCAGACCCTGCCGGCCAACGGCGCCACCAACGTAGGGA CCACCTCCCCCATCATCATCACCTTCAGCGAACCGATGAATCAGGACTCTGTGAAAGCCGCCTTTTCATTGGCCACAGGT TCAACCACTATTCCTTGCACCTTCAGCTATAACGGCACCACGGCAACGTTCACCCCCCCTGCCCTCAACGGCAATACACC ATATACCGCCACCATCGCCGCCACTGCCAAGGACATGGCGGGAAACAGCCTGGGAGGCGATCATGCCTGGACGTTCACAA CCGGCATAGGGCAGGACACCACGCCGCCCACCGTCCAGTCCTATGCCCCGACCGGCACCGCCGTCGGCATCAACTCCACC ATCGCCATAACCTTCAGTGAACCGATGAATACCGACTCCGTAAAAGCTGCGTTCTCGCTGACCCCGACCGCGGACCCGAC CAAGAAAATTTCCGGAACTTTCAGCTTCATCGGTGATACGGCGGTCTTTACACCGGACACTCTCCTTGACTATTATACCT CCTATACAGTCACCATCGCTACAACAGCGACAGATCTGGTCGGTAACAACATGACAGCACTTCCCCCCTGGAATTTCACT ACTAGACCACCTCCCGCCAAGGACACTGAAGCACCAATCGTGAGTCCCGGATTAGAATTTCCCTTGGACGGCTCCACCGA CGTGCCCCGCAATACGCCAATATCCGTCTCGTTCAATGAACCGATAGCCCCCTTCTACTACGGCTCCATCAATGGTTTCC CGACGAAAGTGACCATCGACTACACCACCAACACCGTTACCATGAAGCCCACGACCCTGCTGACAGCCAACACTACCTAC ACGGTCTCCATCAGGGTGACAGACCTGGCCGGCAACTCAATGGCCACTACATACCAGTGGCAATTCACGACAGGCGCTAC CCCGACATCCCTTCCGTGA
Upstream 100 bases:
>100_bases AATGTCAATTAATATTATTCAATACTTACTTTGTTGGATCGACGATGTAACCGGTAGTATTGGAGATTAGACCGCAAGAT GCAAGGGAGGAGGAGTAGTG
Downstream 100 bases:
>100_bases AACGGAGTGCGCCATGCACAAAAAGGGGGGACGATGCACCGCATCGTCCCCCCCTTTCCGTTCCAACCTCAGTGATGTTT ACCCTACCCAAGCTTCCCCT
Product: cytoplasmic membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKGFIKLFFAAIVLCVLVVGCGSGGGGGGVTAIDLIRPEISQTLPANGATNVGTTSPIIITFSEPMNQDSVKAAFSLATG STTIPCTFSYNGTTATFTPPALNGNTPYTATIAATAKDMAGNSLGGDHAWTFTTGIGQDTTPPTVQSYAPTGTAVGINST IAITFSEPMNTDSVKAAFSLTPTADPTKKISGTFSFIGDTAVFTPDTLLDYYTSYTVTIATTATDLVGNNMTALPPWNFT TRPPPAKDTEAPIVSPGLEFPLDGSTDVPRNTPISVSFNEPIAPFYYGSINGFPTKVTIDYTTNTVTMKPTTLLTANTTY TVSIRVTDLAGNSMATTYQWQFTTGATPTSLP
Sequences:
>Translated_352_residues MKGFIKLFFAAIVLCVLVVGCGSGGGGGGVTAIDLIRPEISQTLPANGATNVGTTSPIIITFSEPMNQDSVKAAFSLATG STTIPCTFSYNGTTATFTPPALNGNTPYTATIAATAKDMAGNSLGGDHAWTFTTGIGQDTTPPTVQSYAPTGTAVGINST IAITFSEPMNTDSVKAAFSLTPTADPTKKISGTFSFIGDTAVFTPDTLLDYYTSYTVTIATTATDLVGNNMTALPPWNFT TRPPPAKDTEAPIVSPGLEFPLDGSTDVPRNTPISVSFNEPIAPFYYGSINGFPTKVTIDYTTNTVTMKPTTLLTANTTY TVSIRVTDLAGNSMATTYQWQFTTGATPTSLP >Mature_352_residues MKGFIKLFFAAIVLCVLVVGCGSGGGGGGVTAIDLIRPEISQTLPANGATNVGTTSPIIITFSEPMNQDSVKAAFSLATG STTIPCTFSYNGTTATFTPPALNGNTPYTATIAATAKDMAGNSLGGDHAWTFTTGIGQDTTPPTVQSYAPTGTAVGINST IAITFSEPMNTDSVKAAFSLTPTADPTKKISGTFSFIGDTAVFTPDTLLDYYTSYTVTIATTATDLVGNNMTALPPWNFT TRPPPAKDTEAPIVSPGLEFPLDGSTDVPRNTPISVSFNEPIAPFYYGSINGFPTKVTIDYTTNTVTMKPTTLLTANTTY TVSIRVTDLAGNSMATTYQWQFTTGATPTSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36632; Mature: 36632
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFIKLFFAAIVLCVLVVGCGSGGGGGGVTAIDLIRPEISQTLPANGATNVGTTSPIII CCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCCCEEE TFSEPMNQDSVKAAFSLATGSTTIPCTFSYNGTTATFTPPALNGNTPYTATIAATAKDMA EECCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEECCCCCCCCCCEEEEEEEEHHHHC GNSLGGDHAWTFTTGIGQDTTPPTVQSYAPTGTAVGINSTIAITFSEPMNTDSVKAAFSL CCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEE TPTADPTKKISGTFSFIGDTAVFTPDTLLDYYTSYTVTIATTATDLVGNNMTALPPWNFT CCCCCCCHHCCEEEEEECCEEEECCHHHHHHHCEEEEEEEEEEHHHHCCCEEECCCCCCC TRPPPAKDTEAPIVSPGLEFPLDGSTDVPRNTPISVSFNEPIAPFYYGSINGFPTKVTID CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEE YTTNTVTMKPTTLLTANTTYTVSIRVTDLAGNSMATTYQWQFTTGATPTSLP EECCEEEECCEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MKGFIKLFFAAIVLCVLVVGCGSGGGGGGVTAIDLIRPEISQTLPANGATNVGTTSPIII CCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCCCEEE TFSEPMNQDSVKAAFSLATGSTTIPCTFSYNGTTATFTPPALNGNTPYTATIAATAKDMA EECCCCCCCCCEEEEEEECCCEEEEEEEECCCCEEEECCCCCCCCCCEEEEEEEEHHHHC GNSLGGDHAWTFTTGIGQDTTPPTVQSYAPTGTAVGINSTIAITFSEPMNTDSVKAAFSL CCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEE TPTADPTKKISGTFSFIGDTAVFTPDTLLDYYTSYTVTIATTATDLVGNNMTALPPWNFT CCCCCCCHHCCEEEEEECCEEEECCHHHHHHHCEEEEEEEEEEHHHHCCCEEECCCCCCC TRPPPAKDTEAPIVSPGLEFPLDGSTDVPRNTPISVSFNEPIAPFYYGSINGFPTKVTID CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEE YTTNTVTMKPTTLLTANTTYTVSIRVTDLAGNSMATTYQWQFTTGATPTSLP EECCEEEECCEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA