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The map label for this gene is yiaD [H]

Identifier: 78223923

GI number: 78223923

Start: 3081845

End: 3083041

Strand: Reverse

Name: yiaD [H]

Synonym: Gmet_2727

Alternate gene names: 78223923

Gene position: 3083041-3081845 (Counterclockwise)

Preceding gene: 78223926

Following gene: 78223922

Centisome position: 77.13

GC content: 65.58

Gene sequence:

>1197_bases
ATGGCGACGAACCTGTTGGAGCAGCTTAGCGGGATGTTTACCAGTGACCTAGTGGGGCAGATCGGCCATTTTCTGGGGGA
GGGAACGCCGGCCGTCCAGAAGGGGGTGCCGGCTGCCCTCTCGGCATTGGTGGGTGGGGTTGCGGCAAAGGGTGTGTCGA
CGGACGGTGCGTCGCAGATTCTCGGTCAGGTCCGCTCCGGCGGGTTCGGGGAGAATACCCTCTCGGGGATGGCCGCGTCA
CTGGCAGGGGGTGAGGCGACCAAGGGGCTCCTGGAGCAGGGAAACTCCCTCGTCGGCTCGCTCCTCGGCAACAGGGCCGG
CGGGGTTGCGGAGTGGCTGTCGTCCGTGAGCGGCCTCGGAAAGGGGAGCGCCCAGTCGCTGCTGGCTCTCCTGGCCCCCT
TCGTCATGGGGAAGATCGGCAAGGAGGCACAGGAGAAGGATCTGGGGGCGGTGGGGCTTTCGGGGCTCCTGGAAGGCCAG
GGGCCATTTCTGCAACAGGCCGCCCCGGCGGGACTGGCCGGCCTGCTCGGCCTCTCCAGCCTGTCGGGCCTCGGGGGCGG
CGCGTGCCCCAGCGCCCTCTTCTCCGGCCCCCTCTCGAAGATCGTCTGGATTCTGGCCGGCATCGTGGTTGCCTTCCTCC
TGTACACATTGCCCCAGCGCTGCTCCATGAAGACTCCGGCAATCCAGCCGGCGCCGCCCCAAGTGCAGGCACCGGCCGTC
AAGGTTGATCCGAAGCTGGGAGCCTTCGGTGATGTGACGCTCCCCGACGGCGTCACCCTGAACATTCCCGAATTCGGCAT
CGAGCGGAAGCTCCTCGCCTTCATCCAGGATGGGGCGAGACCCGTGGACAAGACCACCTGGTTCACCTTCGACCGGCTCC
AGTTCGAGACCGGCAGCGCCGTGCTGAAGCCTTCATCCCAGGAGCAACTCGGCAATATCGCCGCGATCCTCAAGGCGTTC
CCCCAGGTGGCCATCAAGATCGGCGGCTACACCGACAACGTGGGTGATCCCCAAGCAAACCTCAAGCTCTCCCGGGACCG
GGCAAGCAACACCATGCAGGAACTGGTGAAGCTGGGCATCGATCCCTCCCGCCTTGAATCCGAAGGGTACGGGGAGGAGC
ATCCGGTTGCCGACAACGCCACGGAGGAAGGACGGCAGCAGAACAGAAGGATCGACGTCCGGGTGACAAAGAAATAG

Upstream 100 bases:

>100_bases
AAAACCTCGAAAGGATTGAATGTCGCAATAAGTATGTTTTAATTGTCACTGCCGGACACGGCGCGAATAGTGGTGATTGC
CACGTCACAAGGAGGGAGCC

Downstream 100 bases:

>100_bases
CTGACACGGGGCGCGGATGGTTCATGGGGGTTATCCGCGCCCCGTGTGCATTCAATCGGCAGACCATGACAGGAGTGCCT
TGCCATGCGATGGAGTGACG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MATNLLEQLSGMFTSDLVGQIGHFLGEGTPAVQKGVPAALSALVGGVAAKGVSTDGASQILGQVRSGGFGENTLSGMAAS
LAGGEATKGLLEQGNSLVGSLLGNRAGGVAEWLSSVSGLGKGSAQSLLALLAPFVMGKIGKEAQEKDLGAVGLSGLLEGQ
GPFLQQAAPAGLAGLLGLSSLSGLGGGACPSALFSGPLSKIVWILAGIVVAFLLYTLPQRCSMKTPAIQPAPPQVQAPAV
KVDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQDGARPVDKTTWFTFDRLQFETGSAVLKPSSQEQLGNIAAILKAF
PQVAIKIGGYTDNVGDPQANLKLSRDRASNTMQELVKLGIDPSRLESEGYGEEHPVADNATEEGRQQNRRIDVRVTKK

Sequences:

>Translated_398_residues
MATNLLEQLSGMFTSDLVGQIGHFLGEGTPAVQKGVPAALSALVGGVAAKGVSTDGASQILGQVRSGGFGENTLSGMAAS
LAGGEATKGLLEQGNSLVGSLLGNRAGGVAEWLSSVSGLGKGSAQSLLALLAPFVMGKIGKEAQEKDLGAVGLSGLLEGQ
GPFLQQAAPAGLAGLLGLSSLSGLGGGACPSALFSGPLSKIVWILAGIVVAFLLYTLPQRCSMKTPAIQPAPPQVQAPAV
KVDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQDGARPVDKTTWFTFDRLQFETGSAVLKPSSQEQLGNIAAILKAF
PQVAIKIGGYTDNVGDPQANLKLSRDRASNTMQELVKLGIDPSRLESEGYGEEHPVADNATEEGRQQNRRIDVRVTKK
>Mature_397_residues
ATNLLEQLSGMFTSDLVGQIGHFLGEGTPAVQKGVPAALSALVGGVAAKGVSTDGASQILGQVRSGGFGENTLSGMAASL
AGGEATKGLLEQGNSLVGSLLGNRAGGVAEWLSSVSGLGKGSAQSLLALLAPFVMGKIGKEAQEKDLGAVGLSGLLEGQG
PFLQQAAPAGLAGLLGLSSLSGLGGGACPSALFSGPLSKIVWILAGIVVAFLLYTLPQRCSMKTPAIQPAPPQVQAPAVK
VDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQDGARPVDKTTWFTFDRLQFETGSAVLKPSSQEQLGNIAAILKAFP
QVAIKIGGYTDNVGDPQANLKLSRDRASNTMQELVKLGIDPSRLESEGYGEEHPVADNATEEGRQQNRRIDVRVTKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=103, Percent_Identity=37.8640776699029, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788957, Length=108, Percent_Identity=35.1851851851852, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 40918; Mature: 40787

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNLLEQLSGMFTSDLVGQIGHFLGEGTPAVQKGVPAALSALVGGVAAKGVSTDGASQI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHH
LGQVRSGGFGENTLSGMAASLAGGEATKGLLEQGNSLVGSLLGNRAGGVAEWLSSVSGLG
HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCC
KGSAQSLLALLAPFVMGKIGKEAQEKDLGAVGLSGLLEGQGPFLQQAAPAGLAGLLGLSS
CCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH
LSGLGGGACPSALFSGPLSKIVWILAGIVVAFLLYTLPQRCSMKTPAIQPAPPQVQAPAV
HCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
KVDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQDGARPVDKTTWFTFDRLQFETGSA
EECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHEEECCCCE
VLKPSSQEQLGNIAAILKAFPQVAIKIGGYTDNVGDPQANLKLSRDRASNTMQELVKLGI
EECCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCC
DPSRLESEGYGEEHPVADNATEEGRQQNRRIDVRVTKK
CHHHHCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECC
>Mature Secondary Structure 
ATNLLEQLSGMFTSDLVGQIGHFLGEGTPAVQKGVPAALSALVGGVAAKGVSTDGASQI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHH
LGQVRSGGFGENTLSGMAASLAGGEATKGLLEQGNSLVGSLLGNRAGGVAEWLSSVSGLG
HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCC
KGSAQSLLALLAPFVMGKIGKEAQEKDLGAVGLSGLLEGQGPFLQQAAPAGLAGLLGLSS
CCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHH
LSGLGGGACPSALFSGPLSKIVWILAGIVVAFLLYTLPQRCSMKTPAIQPAPPQVQAPAV
HCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE
KVDPKLGAFGDVTLPDGVTLNIPEFGIERKLLAFIQDGARPVDKTTWFTFDRLQFETGSA
EECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHEEECCCCE
VLKPSSQEQLGNIAAILKAFPQVAIKIGGYTDNVGDPQANLKLSRDRASNTMQELVKLGI
EECCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCC
DPSRLESEGYGEEHPVADNATEEGRQQNRRIDVRVTKK
CHHHHCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]