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The map label for this gene is 78223872

Identifier: 78223872

GI number: 78223872

Start: 3024137

End: 3025738

Strand: Reverse

Name: 78223872

Synonym: Gmet_2676

Alternate gene names: NA

Gene position: 3025738-3024137 (Counterclockwise)

Preceding gene: 78223873

Following gene: 78223871

Centisome position: 75.69

GC content: 67.85

Gene sequence:

>1602_bases
ATGCCGATTCTGATACGAAACATTGTCCTCGCCCCCGGAGAGGGGGACGACGTTCTGGGTACGCGGGTTGCCGAGCGCTT
CGGGGTGCCGGAGCGGGATATCCAGTCGTTGCATCTGGTCCGCAAGAGCATCGACGCCCGACGCAAACCCCGCGTAATCA
TCGTCTGCACCGTCCAGTGCCGGCTGCTCGATGAGGCGGGGTTCCTCGTGCGGCATGGCCATGATCCTGACGTGAAGGCC
GTGAAAGAGGAGCCGCAGCCGGTCTTCCCGCGGCTTGCCGGGGGAGGGCGGATCGTCATCGTCGGCATGGGGCCGGCGGG
GCTTTTTGCGGCCCTTCGGCTCGCCGAGTACGGCCTTGCCCCCACCATCCTGGAACGGGGACGGCCGGTGGAGGAGCGGA
CCCGGGACGTGCAGGCCTTCTGGAGCCTGGGCCAGCTGGACACGGAGAGCAACGTCCAGTTCGGCGAGGGGGGGGCCGGC
ACCTTCTCCGACGGGAAGCTTACCACCCGGGTGAACGACTCCCGGATCGGCTACGTCCTCCAAAAGTTCGTAGACTTCGG
CGCGTCGCCGGAGATCCTGCATCTGGCCAAGCCCCACGTGGGGACCGATCAGCTGCGACGGGTGGTGGCGGGCATCAGGC
AGGGGCTCCTGGCCGCCGGGTGTGACATCCGTTTCCGGAGCAGGGTGACCGACATCGTCTCCCGGGAAGGGCGGGTCGGC
ACGGTGATCGTGAACGGCACCGACGAGATTGCCGCCGATGCTCTCGTTCTCGCGCCTGGCCACAGTGCCCGCGATACTTA
CGAAATGCTTGCCCGCCGGGGAGTTCACCTCCAGGCGAAGCCCTTTGCCATGGGGGTGCGGGTGGAGCATCCCCAGGAGC
TCATCAACGGGATCCAGTACGGCAAGGGGCATCACCCGGCCCTGCCCCCGGCGGACTATGCCCTGGCCCATAACGACCGG
CGCACCGGCCGCTCGGCCTACTCATTCTGCATGTGCCCCGGCGGCGTGGTGGTGGCGGGAAGCTCCGAAGAGGGGGGCGT
CGTCACCAACGGCATGAGCGCCCACCTGCGCAACACCCCCTTTGCCAACAGCGCTCTGGTGGTCACCGTGGGGCCCGACG
ACTTCGGCTCCTCCTCTCCCCTGGCAGGGGTGGAGTTCCAGCGGCACTGGGAGCGGAGGGCCTTTGAGGCCGGCGGCGGA
GGATACCGGGCCCCGGCCCAGAATCTCCTCTCATTCCTTGGCATGAAGGGGGGGAAGGGGGTATCCTCCTCGTACCGCCC
CCGGGTAACGGAAACCGACCTCTCCCGCGTCCTTCCCGCTGCCGTGACCGGGACCCTGCGGGAGGCACTGCCAACCTTCG
ACCGGAGGATGCGGGGCTTCGTCACCGCCGAGGCGACCCTTACCGGCGTTGAGACCCGGACCTCGGCGCCGGTGCGGATC
GTGCGGGGAGAGGACTGCCAGTCGGTGAGCCTGCAAGGGCTCTATCCCACGGGTGAAGGAGCCGGCTACGCCGGGGGAAT
CATGAGCGCCGCCCTGGACGGTATCCGGGTGGCCGACATCATTGCAGGGAAGATGACCGCCGAGACAAGGAGCGCGATTT
GA

Upstream 100 bases:

>100_bases
CCTTCTCCCTTCCTGACCCTGCCCCCTTTCTCCTTTTCTTTTCCACCCCGATTTTGTATGATGGCGCCCTGTTTTTCAGG
GCTTTTGACGAATTAATACG

Downstream 100 bases:

>100_bases
ACAAAGTGTATGTGAGCAGCATCAAGGATCGGGACCAGCTGGAGTCGGTCTTTCTCGTAAAAGACAAGATCATGGCCATG
GCCAAGAACGGCAAGCCGTA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MPILIRNIVLAPGEGDDVLGTRVAERFGVPERDIQSLHLVRKSIDARRKPRVIIVCTVQCRLLDEAGFLVRHGHDPDVKA
VKEEPQPVFPRLAGGGRIVIVGMGPAGLFAALRLAEYGLAPTILERGRPVEERTRDVQAFWSLGQLDTESNVQFGEGGAG
TFSDGKLTTRVNDSRIGYVLQKFVDFGASPEILHLAKPHVGTDQLRRVVAGIRQGLLAAGCDIRFRSRVTDIVSREGRVG
TVIVNGTDEIAADALVLAPGHSARDTYEMLARRGVHLQAKPFAMGVRVEHPQELINGIQYGKGHHPALPPADYALAHNDR
RTGRSAYSFCMCPGGVVVAGSSEEGGVVTNGMSAHLRNTPFANSALVVTVGPDDFGSSSPLAGVEFQRHWERRAFEAGGG
GYRAPAQNLLSFLGMKGGKGVSSSYRPRVTETDLSRVLPAAVTGTLREALPTFDRRMRGFVTAEATLTGVETRTSAPVRI
VRGEDCQSVSLQGLYPTGEGAGYAGGIMSAALDGIRVADIIAGKMTAETRSAI

Sequences:

>Translated_533_residues
MPILIRNIVLAPGEGDDVLGTRVAERFGVPERDIQSLHLVRKSIDARRKPRVIIVCTVQCRLLDEAGFLVRHGHDPDVKA
VKEEPQPVFPRLAGGGRIVIVGMGPAGLFAALRLAEYGLAPTILERGRPVEERTRDVQAFWSLGQLDTESNVQFGEGGAG
TFSDGKLTTRVNDSRIGYVLQKFVDFGASPEILHLAKPHVGTDQLRRVVAGIRQGLLAAGCDIRFRSRVTDIVSREGRVG
TVIVNGTDEIAADALVLAPGHSARDTYEMLARRGVHLQAKPFAMGVRVEHPQELINGIQYGKGHHPALPPADYALAHNDR
RTGRSAYSFCMCPGGVVVAGSSEEGGVVTNGMSAHLRNTPFANSALVVTVGPDDFGSSSPLAGVEFQRHWERRAFEAGGG
GYRAPAQNLLSFLGMKGGKGVSSSYRPRVTETDLSRVLPAAVTGTLREALPTFDRRMRGFVTAEATLTGVETRTSAPVRI
VRGEDCQSVSLQGLYPTGEGAGYAGGIMSAALDGIRVADIIAGKMTAETRSAI
>Mature_532_residues
PILIRNIVLAPGEGDDVLGTRVAERFGVPERDIQSLHLVRKSIDARRKPRVIIVCTVQCRLLDEAGFLVRHGHDPDVKAV
KEEPQPVFPRLAGGGRIVIVGMGPAGLFAALRLAEYGLAPTILERGRPVEERTRDVQAFWSLGQLDTESNVQFGEGGAGT
FSDGKLTTRVNDSRIGYVLQKFVDFGASPEILHLAKPHVGTDQLRRVVAGIRQGLLAAGCDIRFRSRVTDIVSREGRVGT
VIVNGTDEIAADALVLAPGHSARDTYEMLARRGVHLQAKPFAMGVRVEHPQELINGIQYGKGHHPALPPADYALAHNDRR
TGRSAYSFCMCPGGVVVAGSSEEGGVVTNGMSAHLRNTPFANSALVVTVGPDDFGSSSPLAGVEFQRHWERRAFEAGGGG
YRAPAQNLLSFLGMKGGKGVSSSYRPRVTETDLSRVLPAAVTGTLREALPTFDRRMRGFVTAEATLTGVETRTSAPVRIV
RGEDCQSVSLQGLYPTGEGAGYAGGIMSAALDGIRVADIIAGKMTAETRSAI

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 56994; Mature: 56863

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILIRNIVLAPGEGDDVLGTRVAERFGVPERDIQSLHLVRKSIDARRKPRVIIVCTVQC
CCEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
RLLDEAGFLVRHGHDPDVKAVKEEPQPVFPRLAGGGRIVIVGMGPAGLFAALRLAEYGLA
EEECCCCEEEECCCCCCHHHHHCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCC
PTILERGRPVEERTRDVQAFWSLGQLDTESNVQFGEGGAGTFSDGKLTTRVNDSRIGYVL
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEECCHHHHHHH
QKFVDFGASPEILHLAKPHVGTDQLRRVVAGIRQGLLAAGCDIRFRSRVTDIVSREGRVG
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCEE
TVIVNGTDEIAADALVLAPGHSARDTYEMLARRGVHLQAKPFAMGVRVEHPQELINGIQY
EEEECCCHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEECCEEEEEEECCHHHHHHHHHC
GKGHHPALPPADYALAHNDRRTGRSAYSFCMCPGGVVVAGSSEEGGVVTNGMSAHLRNTP
CCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEECCCHHHHCCCC
FANSALVVTVGPDDFGSSSPLAGVEFQRHWERRAFEAGGGGYRAPAQNLLSFLGMKGGKG
CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
VSSSYRPRVTETDLSRVLPAAVTGTLREALPTFDRRMRGFVTAEATLTGVETRTSAPVRI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCEEE
VRGEDCQSVSLQGLYPTGEGAGYAGGIMSAALDGIRVADIIAGKMTAETRSAI
EECCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEHHHHCCCCCHHHCCC
>Mature Secondary Structure 
PILIRNIVLAPGEGDDVLGTRVAERFGVPERDIQSLHLVRKSIDARRKPRVIIVCTVQC
CEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
RLLDEAGFLVRHGHDPDVKAVKEEPQPVFPRLAGGGRIVIVGMGPAGLFAALRLAEYGLA
EEECCCCEEEECCCCCCHHHHHCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCC
PTILERGRPVEERTRDVQAFWSLGQLDTESNVQFGEGGAGTFSDGKLTTRVNDSRIGYVL
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCEEEEEECCHHHHHHH
QKFVDFGASPEILHLAKPHVGTDQLRRVVAGIRQGLLAAGCDIRFRSRVTDIVSREGRVG
HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCEE
TVIVNGTDEIAADALVLAPGHSARDTYEMLARRGVHLQAKPFAMGVRVEHPQELINGIQY
EEEECCCHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEECCEEEEEEECCHHHHHHHHHC
GKGHHPALPPADYALAHNDRRTGRSAYSFCMCPGGVVVAGSSEEGGVVTNGMSAHLRNTP
CCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEECCCHHHHCCCC
FANSALVVTVGPDDFGSSSPLAGVEFQRHWERRAFEAGGGGYRAPAQNLLSFLGMKGGKG
CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
VSSSYRPRVTETDLSRVLPAAVTGTLREALPTFDRRMRGFVTAEATLTGVETRTSAPVRI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCEEE
VRGEDCQSVSLQGLYPTGEGAGYAGGIMSAALDGIRVADIIAGKMTAETRSAI
EECCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]