| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223802
Identifier: 78223802
GI number: 78223802
Start: 2954562
End: 2954831
Strand: Reverse
Name: 78223802
Synonym: Gmet_2605
Alternate gene names: NA
Gene position: 2954831-2954562 (Counterclockwise)
Preceding gene: 78223804
Following gene: 78223798
Centisome position: 73.92
GC content: 61.48
Gene sequence:
>270_bases ATGAAAAAAATTCTCTCAAGCATCACCGCAGCTCTCGTAGCTATTGCCTTCGCCGGTATCGCATTCGCCGCCGAGCCCGC GGCTAAAGCCGCTCCCGCGCTGCCGGCCGGCCATCCGCCGGTGAAGGTCGAGGAGAAGAAGGGCGTCGAGAAAAAGGCCA AGAAAGCCACGAAGGCAAAGAAGGCCGTGAAGCAGGAAGAAGCCAAGCCCGGCGCAACTCCGGCGACCCCGGCTACTCCC GCAACCCCGGCTGTACCGCACAAGAAGTAA
Upstream 100 bases:
>100_bases GTAATATCGATGAGATAGTCGTTGTGGTAGGTGTGGCACGGTTGCTGCTTTTAGAAAATTCAAGAAGTAGTTATCTCGTT CCACTAAGAGGAGCACATCA
Downstream 100 bases:
>100_bases TCAGTACTTTTCCTGGCGCAAAAAAAGCCGCATCTTCGGATGCGGCTTTTTTTGCGCCTGACTTACCGGCCCGGTGCCCG AGAGGGGGCAGGACGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MKKILSSITAALVAIAFAGIAFAAEPAAKAAPALPAGHPPVKVEEKKGVEKKAKKATKAKKAVKQEEAKPGATPATPATP ATPAVPHKK
Sequences:
>Translated_89_residues MKKILSSITAALVAIAFAGIAFAAEPAAKAAPALPAGHPPVKVEEKKGVEKKAKKATKAKKAVKQEEAKPGATPATPATP ATPAVPHKK >Mature_89_residues MKKILSSITAALVAIAFAGIAFAAEPAAKAAPALPAGHPPVKVEEKKGVEKKAKKATKAKKAVKQEEAKPGATPATPATP ATPAVPHKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8970; Mature: 8970
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILSSITAALVAIAFAGIAFAAEPAAKAAPALPAGHPPVKVEEKKGVEKKAKKATKAK CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHH KAVKQEEAKPGATPATPATPATPAVPHKK HHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKILSSITAALVAIAFAGIAFAAEPAAKAAPALPAGHPPVKVEEKKGVEKKAKKATKAK CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHH KAVKQEEAKPGATPATPATPATPAVPHKK HHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA