Click here to switch to the map view.

The map label for this gene is 78223762

Identifier: 78223762

GI number: 78223762

Start: 2912147

End: 2913223

Strand: Direct

Name: 78223762

Synonym: Gmet_2565

Alternate gene names: NA

Gene position: 2912147-2913223 (Clockwise)

Preceding gene: 78223761

Following gene: 78223767

Centisome position: 72.85

GC content: 54.04

Gene sequence:

>1077_bases
ATGGCAAAGATCAGTTTAGCAGGTCTGCAGCAGTTTGTTGTTGGGTTTGAAGATGAGACTTTCCACGTCGGCATCGACGT
GCATAAACGCAGTTATCACATTGCCTTGCACCGTTGCGACGGTCGAGCATTGAGCTTGGTCAGTCCGGCATCACCTCAAG
CCATAATCGAACTACTTACCGGGTTGAACATCCGGGTTGGTGCTGTAGCCTATGAATCCGGCCCAACCGGGTTCTCCCTC
GCCAGAATGCTCTTTGCTGCCGGGTTCCCGGTTATTGTTGCGGCTCCAAGTAAAATCCCCCGCTCCGTAACTCCTGGCGC
CAAATGTGACCGGCTTGACTGCCTGAAGCTGGCCAACTATGCCGCCAAGGGGATGCTCAAATCTATCGCCATCCCAACAC
AACAGGAAGAAGCACGCCGAACCCTGCTGCGCCGCCGCCATATGCTTGTCGATGACGTCAGACGCTGCAAACAGCGGATC
AAGGGGCTTCTGCTGTTCCTGGGCGTCGATGAACCTAAAGAGCTGGAACACTGGCAAATTGGTGTTGATGCAGTGCTGCT
TGCTCTGCCGATAGACTCAGCTGCACACATGACTCTGCAAAGCTACCTGCGCGAGCTGACGTTTAACCAGGAAGAGCTGC
GCAGGATCGAACACCAGTTAAAGTCGCTGACAAAAACAGAGGAACTAGCCAACACCATGACATGCCTGCAGTCGATCCCC
GGCGTCGGACCGGTAGTTGCCACAACTTTCGCTATGGAGCTGTTTCGCCCAGAACGATTCAAAAGACCGGAAGAGGTCGC
CAGTTATCTCGGCTTGGCTCCGGTAGTTCGGCAAAGCGGCAACAAGTCATCATCAGGCAGACTGGTTCCGGCCGGACAAA
CCAGATTGCGCAGCCTATTGATTGAGGCGGCTTGGATGTGGAGGAGCAGAGATTCATACGCCGAAAACTTGTATCGCCGC
CTGCTCGGCAAGACGGGTATCGCTCAAAAAGCAATAGCTGTCGTAGCCCGCCGACTTGCAATCATTCTATGGCGTCTATA
CGTTGAGCAGCGGCCGTATCGAATAGTCATTTCTTAA

Upstream 100 bases:

>100_bases
TAGGCGAACGGTCCACAGCTGTCACAAAAAATACCATGCTGGCCATCTACTGGTAGTCTTGAAGTGACCGCTTCATACCA
TCAGTGAGAAGGAGGCCAAC

Downstream 100 bases:

>100_bases
TTGGTGTCGCGACGGCTCTTTTGCCACTGTGGTGGCGGAATAAAAATGGCGAAACCTTCTCTAGGTACCGGATCGGTACT
CGGCGCACCTAAGGCGCGAA

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAKISLAGLQQFVVGFEDETFHVGIDVHKRSYHIALHRCDGRALSLVSPASPQAIIELLTGLNIRVGAVAYESGPTGFSL
ARMLFAAGFPVIVAAPSKIPRSVTPGAKCDRLDCLKLANYAAKGMLKSIAIPTQQEEARRTLLRRRHMLVDDVRRCKQRI
KGLLLFLGVDEPKELEHWQIGVDAVLLALPIDSAAHMTLQSYLRELTFNQEELRRIEHQLKSLTKTEELANTMTCLQSIP
GVGPVVATTFAMELFRPERFKRPEEVASYLGLAPVVRQSGNKSSSGRLVPAGQTRLRSLLIEAAWMWRSRDSYAENLYRR
LLGKTGIAQKAIAVVARRLAIILWRLYVEQRPYRIVIS

Sequences:

>Translated_358_residues
MAKISLAGLQQFVVGFEDETFHVGIDVHKRSYHIALHRCDGRALSLVSPASPQAIIELLTGLNIRVGAVAYESGPTGFSL
ARMLFAAGFPVIVAAPSKIPRSVTPGAKCDRLDCLKLANYAAKGMLKSIAIPTQQEEARRTLLRRRHMLVDDVRRCKQRI
KGLLLFLGVDEPKELEHWQIGVDAVLLALPIDSAAHMTLQSYLRELTFNQEELRRIEHQLKSLTKTEELANTMTCLQSIP
GVGPVVATTFAMELFRPERFKRPEEVASYLGLAPVVRQSGNKSSSGRLVPAGQTRLRSLLIEAAWMWRSRDSYAENLYRR
LLGKTGIAQKAIAVVARRLAIILWRLYVEQRPYRIVIS
>Mature_357_residues
AKISLAGLQQFVVGFEDETFHVGIDVHKRSYHIALHRCDGRALSLVSPASPQAIIELLTGLNIRVGAVAYESGPTGFSLA
RMLFAAGFPVIVAAPSKIPRSVTPGAKCDRLDCLKLANYAAKGMLKSIAIPTQQEEARRTLLRRRHMLVDDVRRCKQRIK
GLLLFLGVDEPKELEHWQIGVDAVLLALPIDSAAHMTLQSYLRELTFNQEELRRIEHQLKSLTKTEELANTMTCLQSIPG
VGPVVATTFAMELFRPERFKRPEEVASYLGLAPVVRQSGNKSSSGRLVPAGQTRLRSLLIEAAWMWRSRDSYAENLYRRL
LGKTGIAQKAIAVVARRLAIILWRLYVEQRPYRIVIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 40016; Mature: 39885

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKISLAGLQQFVVGFEDETFHVGIDVHKRSYHIALHRCDGRALSLVSPASPQAIIELLT
CCCCHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEECCCCEEEEECCCCHHHHHHHHH
GLNIRVGAVAYESGPTGFSLARMLFAAGFPVIVAAPSKIPRSVTPGAKCDRLDCLKLANY
CCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
AAKGMLKSIAIPTQQEEARRTLLRRRHMLVDDVRRCKQRIKGLLLFLGVDEPKELEHWQI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHH
GVDAVLLALPIDSAAHMTLQSYLRELTFNQEELRRIEHQLKSLTKTEELANTMTCLQSIP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVGPVVATTFAMELFRPERFKRPEEVASYLGLAPVVRQSGNKSSSGRLVPAGQTRLRSLL
CCCHHHHHHHHHHHHCCHHCCCHHHHHHHHCHHHHHHCCCCCCCCCEEECCHHHHHHHHH
IEAAWMWRSRDSYAENLYRRLLGKTGIAQKAIAVVARRLAIILWRLYVEQRPYRIVIS
HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
AKISLAGLQQFVVGFEDETFHVGIDVHKRSYHIALHRCDGRALSLVSPASPQAIIELLT
CCCHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEECCCCEEEEECCCCHHHHHHHHH
GLNIRVGAVAYESGPTGFSLARMLFAAGFPVIVAAPSKIPRSVTPGAKCDRLDCLKLANY
CCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
AAKGMLKSIAIPTQQEEARRTLLRRRHMLVDDVRRCKQRIKGLLLFLGVDEPKELEHWQI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHH
GVDAVLLALPIDSAAHMTLQSYLRELTFNQEELRRIEHQLKSLTKTEELANTMTCLQSIP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVGPVVATTFAMELFRPERFKRPEEVASYLGLAPVVRQSGNKSSSGRLVPAGQTRLRSLL
CCCHHHHHHHHHHHHCCHHCCCHHHHHHHHCHHHHHHCCCCCCCCCEEECCHHHHHHHHH
IEAAWMWRSRDSYAENLYRRLLGKTGIAQKAIAVVARRLAIILWRLYVEQRPYRIVIS
HHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]