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The map label for this gene is ycaC [C]

Identifier: 78223761

GI number: 78223761

Start: 2911486

End: 2912049

Strand: Direct

Name: ycaC [C]

Synonym: Gmet_2564

Alternate gene names: 78223761

Gene position: 2911486-2912049 (Clockwise)

Preceding gene: 78223760

Following gene: 78223762

Centisome position: 72.83

GC content: 63.83

Gene sequence:

>564_bases
ATGGGCATCATGGACACGTTTTTTCTCGACCGGAACCAGGCGGTACTCGTCGTCGTGGACGTGCAGGAGAAGCTCTGCGC
GGCCATGAACCAGGAGGTCCTGGCACAACTCACGAAGAACACCGGCATCCTCCTGGAGGCCGCGAAGGAGCTCGGCATCC
CGGTGGTGGCCACGGAGCAGTACGTGAAGGGTCTCGGCTGCACCGTGCCGGAGCTGCGGCAACAGTTCGAGGGAGCAGCC
TTCGAGAAGATGGCCTTCAGCTGCTGCGGCGATGAGGCCTTCCTGAACCGGTTGGCGGAGCTGGGGCGGAAGCAGGTGAT
CGTCACCGGCATGGAGACCCACGTCTGCGTCCTCCAGACGATCCTGGAGCTCCGGGAGCGGGGATATCACGTCCACCTGG
TGAAGGATGCGGTCATGAGTCGCAAAAAAGGGAACTGGAAGGTGGGGGTCAACGCCGCAGCAGCGGCCGGCGCGGCCATC
ACCTCCACCGAGGCGGCCCTGTTCCAGCTCCTGCGGGTGGCAGGGACCGAGGAGTTCAAGAAGCTGTCGAAGCTGGTACG
ATAG

Upstream 100 bases:

>100_bases
CGAATCGGTACCATGGCCATCTACGGAGCATTACCGGGTTTTCCCGGTCCCTGGTCCCCGGTCCCCGGTCCCGAATTCCG
ACTGAAAGGAGGAATTACCA

Downstream 100 bases:

>100_bases
GCGAACGGTCCACAGCTGTCACAAAAAATACCATGCTGGCCATCTACTGGTAGTCTTGAAGTGACCGCTTCATACCATCA
GTGAGAAGGAGGCCAACATG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MGIMDTFFLDRNQAVLVVVDVQEKLCAAMNQEVLAQLTKNTGILLEAAKELGIPVVATEQYVKGLGCTVPELRQQFEGAA
FEKMAFSCCGDEAFLNRLAELGRKQVIVTGMETHVCVLQTILELRERGYHVHLVKDAVMSRKKGNWKVGVNAAAAAGAAI
TSTEAALFQLLRVAGTEEFKKLSKLVR

Sequences:

>Translated_187_residues
MGIMDTFFLDRNQAVLVVVDVQEKLCAAMNQEVLAQLTKNTGILLEAAKELGIPVVATEQYVKGLGCTVPELRQQFEGAA
FEKMAFSCCGDEAFLNRLAELGRKQVIVTGMETHVCVLQTILELRERGYHVHLVKDAVMSRKKGNWKVGVNAAAAAGAAI
TSTEAALFQLLRVAGTEEFKKLSKLVR
>Mature_186_residues
GIMDTFFLDRNQAVLVVVDVQEKLCAAMNQEVLAQLTKNTGILLEAAKELGIPVVATEQYVKGLGCTVPELRQQFEGAAF
EKMAFSCCGDEAFLNRLAELGRKQVIVTGMETHVCVLQTILELRERGYHVHLVKDAVMSRKKGNWKVGVNAAAAAGAAIT
STEAALFQLLRVAGTEEFKKLSKLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=180, Percent_Identity=36.1111111111111, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI209969695, Length=177, Percent_Identity=32.7683615819209, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17540156, Length=182, Percent_Identity=36.8131868131868, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI19922924, Length=180, Percent_Identity=30, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21357489, Length=178, Percent_Identity=32.5842696629214, Blast_Score=83, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20440; Mature: 20309

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIMDTFFLDRNQAVLVVVDVQEKLCAAMNQEVLAQLTKNTGILLEAAKELGIPVVATEQ
CCCCHHHEECCCCEEEEEEECHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCEEEHHH
YVKGLGCTVPELRQQFEGAAFEKMAFSCCGDEAFLNRLAELGRKQVIVTGMETHVCVLQT
HHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHH
ILELRERGYHVHLVKDAVMSRKKGNWKVGVNAAAAAGAAITSTEAALFQLLRVAGTEEFK
HHHHHHCCCEEEEHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHHHCHHHHH
KLSKLVR
HHHHHCC
>Mature Secondary Structure 
GIMDTFFLDRNQAVLVVVDVQEKLCAAMNQEVLAQLTKNTGILLEAAKELGIPVVATEQ
CCCHHHEECCCCEEEEEEECHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCEEEHHH
YVKGLGCTVPELRQQFEGAAFEKMAFSCCGDEAFLNRLAELGRKQVIVTGMETHVCVLQT
HHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHH
ILELRERGYHVHLVKDAVMSRKKGNWKVGVNAAAAAGAAITSTEAALFQLLRVAGTEEFK
HHHHHHCCCEEEEHHHHHHHCCCCCEEECCCHHHHCCCHHHHHHHHHHHHHHHHCHHHHH
KLSKLVR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA