| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223712
Identifier: 78223712
GI number: 78223712
Start: 2852852
End: 2853418
Strand: Direct
Name: 78223712
Synonym: Gmet_2512
Alternate gene names: NA
Gene position: 2852852-2853418 (Clockwise)
Preceding gene: 78223711
Following gene: 78223713
Centisome position: 71.37
GC content: 60.67
Gene sequence:
>567_bases ATGAAACGCCTGATCGCCCTGCTGCTTCTCGTCGCCGCCCTTGCCTTCGCCCCCCACGCAGAGGCGTTCTCCCTCTCCCT CGAACCACCTTCGCAGACCATCGCGGTGGGAGACACGGCAACCTTTGCGCTCAGGGTTACGGATCTTGCCGATCCCATTT TATTCTATACCCTTGATGTGCTTTTCGATGCGAGCGTGCTCGCCTTCCAGGGGGCGATTTTCACCAACGCCTTGGGTAAT CCGTCTGATTCCATGGTGGACACGAGCCTTGTGGACACCGGTCTTTTGGGTCTGGTGGGGACTTCCGCCACCGGTTCGTT GACCGGCGACTTCGATCTGGCCTACCTCACCTTCTCAGGCATTACTGCCGGAACCTCCGACCTGATCATCGGTTCCAACA CTTTTTTCGGTATTGACCCGAACACCGGCGGTGACATCCCCCTCAACGTGGATTCGCTCTTCGATAGCCGGGCAACCGTG GTAAACGCCGTCCCTGAACCGGGCACCCTGATCCTCCTGGGCGCCGGCCTGACCGGGCTGGCTGTCTGGCGGCGCAGGCA CCCCTGA
Upstream 100 bases:
>100_bases ATCGGGATGTTATCTATTGGCACGTCACTTGATAGAGAAGAGGTATCAACCGACCGCCGCGCCGCGGCACATCCCTTGGT ATTCAGTTCACGGAGAAACC
Downstream 100 bases:
>100_bases GAAGGAACACTGGCTCCTCCCTTTTTGGCTTTTCCCTCTCTCGCATCAAGTTTTTTCCAGGCATGACTGACCGCCGCTCC AACCGGGGCGGCGGCACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKRLIALLLLVAALAFAPHAEAFSLSLEPPSQTIAVGDTATFALRVTDLADPILFYTLDVLFDASVLAFQGAIFTNALGN PSDSMVDTSLVDTGLLGLVGTSATGSLTGDFDLAYLTFSGITAGTSDLIIGSNTFFGIDPNTGGDIPLNVDSLFDSRATV VNAVPEPGTLILLGAGLTGLAVWRRRHP
Sequences:
>Translated_188_residues MKRLIALLLLVAALAFAPHAEAFSLSLEPPSQTIAVGDTATFALRVTDLADPILFYTLDVLFDASVLAFQGAIFTNALGN PSDSMVDTSLVDTGLLGLVGTSATGSLTGDFDLAYLTFSGITAGTSDLIIGSNTFFGIDPNTGGDIPLNVDSLFDSRATV VNAVPEPGTLILLGAGLTGLAVWRRRHP >Mature_188_residues MKRLIALLLLVAALAFAPHAEAFSLSLEPPSQTIAVGDTATFALRVTDLADPILFYTLDVLFDASVLAFQGAIFTNALGN PSDSMVDTSLVDTGLLGLVGTSATGSLTGDFDLAYLTFSGITAGTSDLIIGSNTFFGIDPNTGGDIPLNVDSLFDSRATV VNAVPEPGTLILLGAGLTGLAVWRRRHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19470; Mature: 19470
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIALLLLVAALAFAPHAEAFSLSLEPPSQTIAVGDTATFALRVTDLADPILFYTLDV CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCEEEEEEEECCCCHHHHHHHHH LFDASVLAFQGAIFTNALGNPSDSMVDTSLVDTGLLGLVGTSATGSLTGDFDLAYLTFSG HHCCHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEC ITAGTSDLIIGSNTFFGIDPNTGGDIPLNVDSLFDSRATVVNAVPEPGTLILLGAGLTGL CCCCCCCEEEECCEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCCCEEEEECCCCHHH AVWRRRHP HHHHCCCC >Mature Secondary Structure MKRLIALLLLVAALAFAPHAEAFSLSLEPPSQTIAVGDTATFALRVTDLADPILFYTLDV CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCEEEEEEEECCCCHHHHHHHHH LFDASVLAFQGAIFTNALGNPSDSMVDTSLVDTGLLGLVGTSATGSLTGDFDLAYLTFSG HHCCHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEC ITAGTSDLIIGSNTFFGIDPNTGGDIPLNVDSLFDSRATVVNAVPEPGTLILLGAGLTGL CCCCCCCEEEECCEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCCCEEEEECCCCHHH AVWRRRHP HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA