| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223684
Identifier: 78223684
GI number: 78223684
Start: 2823456
End: 2824190
Strand: Reverse
Name: 78223684
Synonym: Gmet_2481
Alternate gene names: NA
Gene position: 2824190-2823456 (Counterclockwise)
Preceding gene: 78223685
Following gene: 78223683
Centisome position: 70.65
GC content: 60.41
Gene sequence:
>735_bases GTGCCGGTCCTGCGCGTTCGTCGCGCTGTCCCGTTCCGTTTCGTTGACCGTCCGGCAAAGCCTCAAAAACCGACCCAAAA AATAACTATGAAAAAAATGATCCTTCTATCGGCAGTCATGATGCTCACTGGTGTTTCCTGCAACCAGACCGCTCTGCGCC GGGACCCCGTCACGGTGGTCCTCAGCGAATCCGGTGTTGACCTGGAAGTCCGTCGGCTCATGGATCAGGGTATCGAGTTG GATGAACGTCAACGACAGGCACGGGCCATTGCCACGGTGTTTGCGCGACGCACCACCCCCGACCGGGCCTACCGGCTCGC ATCCCTCTGCTACCTGAAAACCCTCGGTACCGATTTCATGCCCCTCGACCTTGCCGAACTGGCCTTGGCCGAAACCGGTT CCATCGGCTTCGACCCGAAGGCGGTTTCGTCGAAGGGTGCCCTTGGTGTCTGGCAGCTCATGCCCTATCGGGCAGAGAGC CACGGATTCAACCCCCACGAGATGGCCAATGACGAAAAATGCGCGGAGGCCGCTGTTCGGGAGTTGGCCACCAAGCTCGA CATGGCCCGCGGCAATCTGGTGAGGGCAAAGAAACTCTACTGCGGCGTCGGTCCCGAAGCCGATGCCTACGAAATCAAGC GCCGCCGCTACCAGCGAGAGATCCTGAGGGAACTCGGCACTCCCCTCCACGTCCGGGCCGTGGATTTGCGCTTCTCGTTC GCCAAGGTCTCATAG
Upstream 100 bases:
>100_bases TGTTTGTTAGCTATTTTCGTGGACCATGGCGACTCTGTCGCATAGCCGGGAGACCTGGAAATCCAGTCGTCTCTACATCA AGGAAAGGAGTTATTGGCCG
Downstream 100 bases:
>100_bases CTCTGCCGCAGGCGAGCAGGACAACCCAGCACGAAGGGCGGACTTCGCAAGGAGTCTGCCCTTTTTCGTGGTACTTCTCG CGCGGCAGGGGACGGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPVLRVRRAVPFRFVDRPAKPQKPTQKITMKKMILLSAVMMLTGVSCNQTALRRDPVTVVLSESGVDLEVRRLMDQGIEL DERQRQARAIATVFARRTTPDRAYRLASLCYLKTLGTDFMPLDLAELALAETGSIGFDPKAVSSKGALGVWQLMPYRAES HGFNPHEMANDEKCAEAAVRELATKLDMARGNLVRAKKLYCGVGPEADAYEIKRRRYQREILRELGTPLHVRAVDLRFSF AKVS
Sequences:
>Translated_244_residues MPVLRVRRAVPFRFVDRPAKPQKPTQKITMKKMILLSAVMMLTGVSCNQTALRRDPVTVVLSESGVDLEVRRLMDQGIEL DERQRQARAIATVFARRTTPDRAYRLASLCYLKTLGTDFMPLDLAELALAETGSIGFDPKAVSSKGALGVWQLMPYRAES HGFNPHEMANDEKCAEAAVRELATKLDMARGNLVRAKKLYCGVGPEADAYEIKRRRYQREILRELGTPLHVRAVDLRFSF AKVS >Mature_243_residues PVLRVRRAVPFRFVDRPAKPQKPTQKITMKKMILLSAVMMLTGVSCNQTALRRDPVTVVLSESGVDLEVRRLMDQGIELD ERQRQARAIATVFARRTTPDRAYRLASLCYLKTLGTDFMPLDLAELALAETGSIGFDPKAVSSKGALGVWQLMPYRAESH GFNPHEMANDEKCAEAAVRELATKLDMARGNLVRAKKLYCGVGPEADAYEIKRRRYQREILRELGTPLHVRAVDLRFSFA KVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27448; Mature: 27317
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLRVRRAVPFRFVDRPAKPQKPTQKITMKKMILLSAVMMLTGVSCNQTALRRDPVTVV CCCHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEE LSESGVDLEVRRLMDQGIELDERQRQARAIATVFARRTTPDRAYRLASLCYLKTLGTDFM ECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC PLDLAELALAETGSIGFDPKAVSSKGALGVWQLMPYRAESHGFNPHEMANDEKCAEAAVR CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCHHCCCHHHHHHHHHH ELATKLDMARGNLVRAKKLYCGVGPEADAYEIKRRRYQREILRELGTPLHVRAVDLRFSF HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEE AKVS ECCC >Mature Secondary Structure PVLRVRRAVPFRFVDRPAKPQKPTQKITMKKMILLSAVMMLTGVSCNQTALRRDPVTVV CCHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEE LSESGVDLEVRRLMDQGIELDERQRQARAIATVFARRTTPDRAYRLASLCYLKTLGTDFM ECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC PLDLAELALAETGSIGFDPKAVSSKGALGVWQLMPYRAESHGFNPHEMANDEKCAEAAVR CHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCHHCCCHHHHHHHHHH ELATKLDMARGNLVRAKKLYCGVGPEADAYEIKRRRYQREILRELGTPLHVRAVDLRFSF HHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEE AKVS ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA