| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is macB [H]
Identifier: 78223608
GI number: 78223608
Start: 2719888
End: 2721051
Strand: Reverse
Name: macB [H]
Synonym: Gmet_2405
Alternate gene names: 78223608
Gene position: 2721051-2719888 (Counterclockwise)
Preceding gene: 78223609
Following gene: 78223606
Centisome position: 68.07
GC content: 63.06
Gene sequence:
>1164_bases ATGGGCATCCCTTACTCCTACAGCTTCCGCAACCTCTGGACCCGGCGTCTGACCACGGTCCTTACCGCCTCAGGCATGGC GCTGGTCGTCTTTGTCTTTGCGGCAACCCTCATGCTGGCCGAGGGGCTTCGGAAGACCCTGGTGGATACCGGTTCCTACG ACAACGTGGTGGTGATCCGCAAGTCGGCCCAGACCGAGGTGCAGAGCGGCATCGACCGTTCCCAGGCCGCGGTGGTGGAA ACTCAGCCCGAGATCGCGGTGGAGGGGGGAGAGCGTCTTGTCGCGAAGGAAATCGTGGTCCTCATCAGCCTTCCTAAGCG GGGGAGTGGTAAGCCCTCCAACGTCATTATCCGGGGGGTAAGTGCCACATCGCTCCTCATGCGCCCCCAGGTGAAAGTCA TTGAGGGACGGATGCCGCGCCCCGGCTCGGCCGAGATCATGGCAGGAGCCAGCATTGCCAAGCGCTTCAAGGGGGGAGGT ATCGGCGAGACCCTGCGCTTCGGCATGCGGGACTGGACCGTGGTGGGAATCTTCGAGGCCGGCAATACCGGCTTCTCATC GGAGATATGGGGCGACGTGGACCAGCTCATGCAGGCCTTCCGCCGGCCCGTCTACTCCTCCATCATCTTCAAGTTGCGGG ACCCGTCGGAGTTCGTCAGGGTGAAGGAGCGGATCGAGGGCGACCCGCGCCTGACCCTGGAAGCGAAGCGGGAGATCACC TTCTACGCCGATCAGTCCCAGGCCATGGCCAAGTTTCTCCGGATTCTCGGGATAACCCTCACCATCATCTTCTCCCTCGG GGCGGTCATCGGCGCCATGATCACCATGTACGCCGCCGTGGCCAACCGGGTCACCGAGATAGGCACCCTGCGGGCCCTGG GCTTCCAGCGGGGGAGCATTCTGGCCGCCTTCATCCTGGAGTCGCTCTTCCTGGGGCTCCTGGGCGGGGTGGTGGGGCTT TTCTTCGCTTCGTTCATGCAACTGGTCACCATCTCCACCATGAACTGGCAGACCTTTTCGGAGCTGGCTTTCACCTTCTC CCTCACCCCCGGCATCATCGGCAAGTCGCTTATCTTTTCCCTCGTCATGGGGTTTGTGGGGGGATTGCTGCCGGCCTTCC GGGCGGCGCGGATGAATATCGTGGATGCGCTGCGGGCGACGTAG
Upstream 100 bases:
>100_bases CCTGGCCGCCGCCCTCGTGGTGGGGGTCGTGGCGGGAATCTTCCCCACCTGGCGAGGGGCGACCATTGGAATAGCGGATG GCCTGCGGAGGATAGGGTAG
Downstream 100 bases:
>100_bases CGTTTTTCTGCTGTTCGGAGAGTGGTTTTGGGGGGGTCAGAGCCCCAGGGCGTTCTGGGTCTCTGCCAGGTAGGTACGCA CGGCGCCGGAACTGACGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MGIPYSYSFRNLWTRRLTTVLTASGMALVVFVFAATLMLAEGLRKTLVDTGSYDNVVVIRKSAQTEVQSGIDRSQAAVVE TQPEIAVEGGERLVAKEIVVLISLPKRGSGKPSNVIIRGVSATSLLMRPQVKVIEGRMPRPGSAEIMAGASIAKRFKGGG IGETLRFGMRDWTVVGIFEAGNTGFSSEIWGDVDQLMQAFRRPVYSSIIFKLRDPSEFVRVKERIEGDPRLTLEAKREIT FYADQSQAMAKFLRILGITLTIIFSLGAVIGAMITMYAAVANRVTEIGTLRALGFQRGSILAAFILESLFLGLLGGVVGL FFASFMQLVTISTMNWQTFSELAFTFSLTPGIIGKSLIFSLVMGFVGGLLPAFRAARMNIVDALRAT
Sequences:
>Translated_387_residues MGIPYSYSFRNLWTRRLTTVLTASGMALVVFVFAATLMLAEGLRKTLVDTGSYDNVVVIRKSAQTEVQSGIDRSQAAVVE TQPEIAVEGGERLVAKEIVVLISLPKRGSGKPSNVIIRGVSATSLLMRPQVKVIEGRMPRPGSAEIMAGASIAKRFKGGG IGETLRFGMRDWTVVGIFEAGNTGFSSEIWGDVDQLMQAFRRPVYSSIIFKLRDPSEFVRVKERIEGDPRLTLEAKREIT FYADQSQAMAKFLRILGITLTIIFSLGAVIGAMITMYAAVANRVTEIGTLRALGFQRGSILAAFILESLFLGLLGGVVGL FFASFMQLVTISTMNWQTFSELAFTFSLTPGIIGKSLIFSLVMGFVGGLLPAFRAARMNIVDALRAT >Mature_386_residues GIPYSYSFRNLWTRRLTTVLTASGMALVVFVFAATLMLAEGLRKTLVDTGSYDNVVVIRKSAQTEVQSGIDRSQAAVVET QPEIAVEGGERLVAKEIVVLISLPKRGSGKPSNVIIRGVSATSLLMRPQVKVIEGRMPRPGSAEIMAGASIAKRFKGGGI GETLRFGMRDWTVVGIFEAGNTGFSSEIWGDVDQLMQAFRRPVYSSIIFKLRDPSEFVRVKERIEGDPRLTLEAKREITF YADQSQAMAKFLRILGITLTIIFSLGAVIGAMITMYAAVANRVTEIGTLRALGFQRGSILAAFILESLFLGLLGGVVGLF FASFMQLVTISTMNWQTFSELAFTFSLTPGIIGKSLIFSLVMGFVGGLLPAFRAARMNIVDALRAT
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 42106; Mature: 41975
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPYSYSFRNLWTRRLTTVLTASGMALVVFVFAATLMLAEGLRKTLVDTGSYDNVVVIR CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE KSAQTEVQSGIDRSQAAVVETQPEIAVEGGERLVAKEIVVLISLPKRGSGKPSNVIIRGV CCHHHHHHHCCCHHHHEEEECCCCEEECCCCHHHHHHHHHEEECCCCCCCCCCCEEEECC SATSLLMRPQVKVIEGRMPRPGSAEIMAGASIAKRFKGGGIGETLRFGMRDWTVVGIFEA CHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEEC GNTGFSSEIWGDVDQLMQAFRRPVYSSIIFKLRDPSEFVRVKERIEGDPRLTLEAKREIT CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCEEE FYADQSQAMAKFLRILGITLTIIFSLGAVIGAMITMYAAVANRVTEIGTLRALGFQRGSI EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LAAFILESLFLGLLGGVVGLFFASFMQLVTISTMNWQTFSELAFTFSLTPGIIGKSLIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCHHHHHHHHHH LVMGFVGGLLPAFRAARMNIVDALRAT HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIPYSYSFRNLWTRRLTTVLTASGMALVVFVFAATLMLAEGLRKTLVDTGSYDNVVVIR CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE KSAQTEVQSGIDRSQAAVVETQPEIAVEGGERLVAKEIVVLISLPKRGSGKPSNVIIRGV CCHHHHHHHCCCHHHHEEEECCCCEEECCCCHHHHHHHHHEEECCCCCCCCCCCEEEECC SATSLLMRPQVKVIEGRMPRPGSAEIMAGASIAKRFKGGGIGETLRFGMRDWTVVGIFEA CHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEEC GNTGFSSEIWGDVDQLMQAFRRPVYSSIIFKLRDPSEFVRVKERIEGDPRLTLEAKREIT CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCEEE FYADQSQAMAKFLRILGITLTIIFSLGAVIGAMITMYAAVANRVTEIGTLRALGFQRGSI EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LAAFILESLFLGLLGGVVGLFFASFMQLVTISTMNWQTFSELAFTFSLTPGIIGKSLIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCHHHHHHHHHH LVMGFVGGLLPAFRAARMNIVDALRAT HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA