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The map label for this gene is 78223609

Identifier: 78223609

GI number: 78223609

Start: 2721052

End: 2722209

Strand: Reverse

Name: 78223609

Synonym: Gmet_2406

Alternate gene names: NA

Gene position: 2722209-2721052 (Counterclockwise)

Preceding gene: 78223610

Following gene: 78223608

Centisome position: 68.1

GC content: 61.92

Gene sequence:

>1158_bases
GTGTTCATCCTCAAGCTCCTTATACGCAACGCCTTCCGCCACAAGCTCCGGACCACTCTCACCATCGTGGGGGTGGCCAT
TGCCATCGTGGCCTTCGGCCTGCTGCGGACCCTGGTGGATCTCTGGTACGCCGGAGTGGAGGCGTCGTCGGCCTCCCGCC
TCATCACCCGCAATGCCATCTCTCTCGTCTTTCCCCTCCCCATATCCTACAAGGATCGGATCCGCCAGGTGCCGGGGGTG
AAGGACGTCTCCTGGGGGAACTGGTTCGGCGGTATCTACAAGGACGAGAAGAACTTTTTCCCCAACTTCGCCGTCGAACC
CAAGAGCTACCTGGCCATGTACCCCGAGTACGTCATCGACCCCTCTCAGGTAAAGGCCTTTGCCCTTGACCGCAAGGGGT
GCATCGTGGGGCGGAAGACCGCCGAGCGCTTCGGCTGGAAGGTGGGGGATCAGGTGACGCTGCGTGGGACCATCTTTCCC
GGCCAGTGGGACTTCGTGATCCGGGGGATCTACCGGGGTGCCCAGAAGAACACCGACGAGACCCAGCTCTTCTTCCACTG
GGACTACCTGAACGAAACCGTCAAGAAGACCATTGCCCGTCGGGCCGACCAGGTGGGGTTTTACATGATCTCCCTCACCA
AGCCGGAACAGGCGGCGGAGGTCTCCCTGGCGATCGATGCCATCTTCAAGAACTCCCTGGCCGAGACCCTGACCGAGACC
GAGAAGGCGTTCCAGATGGGTTTTGTCTCCATGACCGAGGCGATCCTAGTTGCCATCCAGATCGTCTCCTACGTGGTGAT
CGTCATCATCATGGTAGTGGCGGCCAACACCATGGCCATGACCGCCCGGGAGCGGATCGCCGAGTACGCCACCCTGAAAA
CCCTCGGCTTCGGGGCGATCCACATCGCGGGGGTGGTCTTTGGCGAATCCATTGTCATCGCCATGATCGGCGGGATTGCC
GGGGTTGCCTGCACCTTTCCGGCGGCCCACTGGATCGAGACGGAACTCTCCCAGTTCTTCCCGGTCTTCTCCATTGCCCC
GCAAACCATCGTGATGGACCTGGCCGCCGCCCTCGTGGTGGGGGTCGTGGCGGGAATCTTCCCCACCTGGCGAGGGGCGA
CCATTGGAATAGCGGATGGCCTGCGGAGGATAGGGTAG

Upstream 100 bases:

>100_bases
AACCATCATCATGGTCACCCACGACCCCCGGGCTGCCGAGCAGGCCCACCGGCTCCTCCACCTGGAGAAGGGGGAGCTGA
CCGACGGGGCGGGGTAGACC

Downstream 100 bases:

>100_bases
ATGGGCATCCCTTACTCCTACAGCTTCCGCAACCTCTGGACCCGGCGTCTGACCACGGTCCTTACCGCCTCAGGCATGGC
GCTGGTCGTCTTTGTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MFILKLLIRNAFRHKLRTTLTIVGVAIAIVAFGLLRTLVDLWYAGVEASSASRLITRNAISLVFPLPISYKDRIRQVPGV
KDVSWGNWFGGIYKDEKNFFPNFAVEPKSYLAMYPEYVIDPSQVKAFALDRKGCIVGRKTAERFGWKVGDQVTLRGTIFP
GQWDFVIRGIYRGAQKNTDETQLFFHWDYLNETVKKTIARRADQVGFYMISLTKPEQAAEVSLAIDAIFKNSLAETLTET
EKAFQMGFVSMTEAILVAIQIVSYVVIVIIMVVAANTMAMTARERIAEYATLKTLGFGAIHIAGVVFGESIVIAMIGGIA
GVACTFPAAHWIETELSQFFPVFSIAPQTIVMDLAAALVVGVVAGIFPTWRGATIGIADGLRRIG

Sequences:

>Translated_385_residues
MFILKLLIRNAFRHKLRTTLTIVGVAIAIVAFGLLRTLVDLWYAGVEASSASRLITRNAISLVFPLPISYKDRIRQVPGV
KDVSWGNWFGGIYKDEKNFFPNFAVEPKSYLAMYPEYVIDPSQVKAFALDRKGCIVGRKTAERFGWKVGDQVTLRGTIFP
GQWDFVIRGIYRGAQKNTDETQLFFHWDYLNETVKKTIARRADQVGFYMISLTKPEQAAEVSLAIDAIFKNSLAETLTET
EKAFQMGFVSMTEAILVAIQIVSYVVIVIIMVVAANTMAMTARERIAEYATLKTLGFGAIHIAGVVFGESIVIAMIGGIA
GVACTFPAAHWIETELSQFFPVFSIAPQTIVMDLAAALVVGVVAGIFPTWRGATIGIADGLRRIG
>Mature_385_residues
MFILKLLIRNAFRHKLRTTLTIVGVAIAIVAFGLLRTLVDLWYAGVEASSASRLITRNAISLVFPLPISYKDRIRQVPGV
KDVSWGNWFGGIYKDEKNFFPNFAVEPKSYLAMYPEYVIDPSQVKAFALDRKGCIVGRKTAERFGWKVGDQVTLRGTIFP
GQWDFVIRGIYRGAQKNTDETQLFFHWDYLNETVKKTIARRADQVGFYMISLTKPEQAAEVSLAIDAIFKNSLAETLTET
EKAFQMGFVSMTEAILVAIQIVSYVVIVIIMVVAANTMAMTARERIAEYATLKTLGFGAIHIAGVVFGESIVIAMIGGIA
GVACTFPAAHWIETELSQFFPVFSIAPQTIVMDLAAALVVGVVAGIFPTWRGATIGIADGLRRIG

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 42509; Mature: 42509

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILKLLIRNAFRHKLRTTLTIVGVAIAIVAFGLLRTLVDLWYAGVEASSASRLITRNAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCE
SLVFPLPISYKDRIRQVPGVKDVSWGNWFGGIYKDEKNFFPNFAVEPKSYLAMYPEYVID
EEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCHHHHCC
PSQVKAFALDRKGCIVGRKTAERFGWKVGDQVTLRGTIFPGQWDFVIRGIYRGAQKNTDE
HHHHHHHEECCCCCEEECHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCC
TQLFFHWDYLNETVKKTIARRADQVGFYMISLTKPEQAAEVSLAIDAIFKNSLAETLTET
CEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKAFQMGFVSMTEAILVAIQIVSYVVIVIIMVVAANTMAMTARERIAEYATLKTLGFGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
HIAGVVFGESIVIAMIGGIAGVACTFPAAHWIETELSQFFPVFSIAPQTIVMDLAAALVV
HHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
GVVAGIFPTWRGATIGIADGLRRIG
HHHHHHCCCCCCCEEEHHHHHHHCC
>Mature Secondary Structure
MFILKLLIRNAFRHKLRTTLTIVGVAIAIVAFGLLRTLVDLWYAGVEASSASRLITRNAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCE
SLVFPLPISYKDRIRQVPGVKDVSWGNWFGGIYKDEKNFFPNFAVEPKSYLAMYPEYVID
EEEEECCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCHHHHCC
PSQVKAFALDRKGCIVGRKTAERFGWKVGDQVTLRGTIFPGQWDFVIRGIYRGAQKNTDE
HHHHHHHEECCCCCEEECHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCC
TQLFFHWDYLNETVKKTIARRADQVGFYMISLTKPEQAAEVSLAIDAIFKNSLAETLTET
CEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKAFQMGFVSMTEAILVAIQIVSYVVIVIIMVVAANTMAMTARERIAEYATLKTLGFGAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
HIAGVVFGESIVIAMIGGIAGVACTFPAAHWIETELSQFFPVFSIAPQTIVMDLAAALVV
HHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH
GVVAGIFPTWRGATIGIADGLRRIG
HHHHHHCCCCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]