| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223597
Identifier: 78223597
GI number: 78223597
Start: 2705027
End: 2705956
Strand: Reverse
Name: 78223597
Synonym: Gmet_2394
Alternate gene names: NA
Gene position: 2705956-2705027 (Counterclockwise)
Preceding gene: 78223598
Following gene: 78223596
Centisome position: 67.69
GC content: 53.98
Gene sequence:
>930_bases ATGACCATTGCAGTTCTGCGGATAACGATCCGTCTGGCCGAGGACATATCTGACCCGTATCTTTTGTTTCGCATTCGTGA TGGATTTCAGAGATCGTTCCGGCGGGTGGTGGGTTGCGCGGAGGAGGAATGTGTTCTGTGCAACCGCCGTAATGAGTGCC CGTATCGAATCGTCTTTGCCCAAGCCCTGAGTTCAGATCCGGCGACGGTCAAGAGACATCAGAAACCCCCTCTTCCCTTT GCATTCTCATTTCCGGTAATTCCCAGTCAGCAGAAATCAGACACTCTGTTCGAGATCCGTCTTGCTCTCCTGGGAACGGC GACACGTTTCGTTACTGAGTTTCTGGATTCTCTTAAGCTTCTTTGCTCCAAACACGACCAGAGAGACGAATTGGCTGCTA TCGTGGAGCGTGTCGAATCCCTAGGCTATCGTGGGGAGCCTTACCTTATTTATGCGGCAGATCACTCGGCCGGGTTTGCA GAATCCCTCACCCTCCTGACGTCCGAGGGGCTCTGTGACACGCGTTGGGTGGACGTTTCGGGCGACGTGACCCTCCGACT GCTCACGCCACTGAAGATTATGCAGGATGGCAGGCCGAGTCGTACCTTTTCTTTCCCCCTTTTGATGCGCACCCTCATAC GACGAATTTCATCCCTTGCTTCCTATTACTGCGACGACGAGATTTTGGTGGACTTTAGGTGGTTGGCGTCCCTCTGTGAG ACGGTTACCGTATCGGGCAGTTCGATTCAGTGGGTTGAATGGGGTGGGGGCAAACAGGGGAGAAAACTCGCCGGATTGAC CGGAGAGGCGGTATTGAGCAGCGTGCCCGAGGAATTTATCCCGTTTTTGCTCTTAGGCGAGTTCCTTAATGTGGGTAAAG GCGCAGCGTTCGGCCTCGGTCGCTTCTCCATTGGTGCTAATTGCCCGTAA
Upstream 100 bases:
>100_bases TTCTAGCGATGCCCTGACTCATTATGAAGCCGTGCAATGGCACGGAGCGATGGGGCGGATTTAACGATCCGCCCCATTTT TTTTTGATAGGGGAGTAAGT
Downstream 100 bases:
>100_bases TGCCTTGCAAATCAAGGAGTGTGTGTTACCACTTTACTGACATTGCAATGATATGATCTGCTGAAACTTGACCGAGAATC GAGTTTCGGCGTCAAGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTIAVLRITIRLAEDISDPYLLFRIRDGFQRSFRRVVGCAEEECVLCNRRNECPYRIVFAQALSSDPATVKRHQKPPLPF AFSFPVIPSQQKSDTLFEIRLALLGTATRFVTEFLDSLKLLCSKHDQRDELAAIVERVESLGYRGEPYLIYAADHSAGFA ESLTLLTSEGLCDTRWVDVSGDVTLRLLTPLKIMQDGRPSRTFSFPLLMRTLIRRISSLASYYCDDEILVDFRWLASLCE TVTVSGSSIQWVEWGGGKQGRKLAGLTGEAVLSSVPEEFIPFLLLGEFLNVGKGAAFGLGRFSIGANCP
Sequences:
>Translated_309_residues MTIAVLRITIRLAEDISDPYLLFRIRDGFQRSFRRVVGCAEEECVLCNRRNECPYRIVFAQALSSDPATVKRHQKPPLPF AFSFPVIPSQQKSDTLFEIRLALLGTATRFVTEFLDSLKLLCSKHDQRDELAAIVERVESLGYRGEPYLIYAADHSAGFA ESLTLLTSEGLCDTRWVDVSGDVTLRLLTPLKIMQDGRPSRTFSFPLLMRTLIRRISSLASYYCDDEILVDFRWLASLCE TVTVSGSSIQWVEWGGGKQGRKLAGLTGEAVLSSVPEEFIPFLLLGEFLNVGKGAAFGLGRFSIGANCP >Mature_308_residues TIAVLRITIRLAEDISDPYLLFRIRDGFQRSFRRVVGCAEEECVLCNRRNECPYRIVFAQALSSDPATVKRHQKPPLPFA FSFPVIPSQQKSDTLFEIRLALLGTATRFVTEFLDSLKLLCSKHDQRDELAAIVERVESLGYRGEPYLIYAADHSAGFAE SLTLLTSEGLCDTRWVDVSGDVTLRLLTPLKIMQDGRPSRTFSFPLLMRTLIRRISSLASYYCDDEILVDFRWLASLCET VTVSGSSIQWVEWGGGKQGRKLAGLTGEAVLSSVPEEFIPFLLLGEFLNVGKGAAFGLGRFSIGANCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34487; Mature: 34356
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAVLRITIRLAEDISDPYLLFRIRDGFQRSFRRVVGCAEEECVLCNRRNECPYRIVFA CEEEEEEEEEHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE QALSSDPATVKRHQKPPLPFAFSFPVIPSQQKSDTLFEIRLALLGTATRFVTEFLDSLKL HHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LCSKHDQRDELAAIVERVESLGYRGEPYLIYAADHSAGFAESLTLLTSEGLCDTRWVDVS HHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEECC GDVTLRLLTPLKIMQDGRPSRTFSFPLLMRTLIRRISSLASYYCDDEILVDFRWLASLCE CCEEEEEECCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHH TVTVSGSSIQWVEWGGGKQGRKLAGLTGEAVLSSVPEEFIPFLLLGEFLNVGKGAAFGLG HEECCCCEEEEEEECCCCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCC RFSIGANCP CCCCCCCCC >Mature Secondary Structure TIAVLRITIRLAEDISDPYLLFRIRDGFQRSFRRVVGCAEEECVLCNRRNECPYRIVFA EEEEEEEEEHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE QALSSDPATVKRHQKPPLPFAFSFPVIPSQQKSDTLFEIRLALLGTATRFVTEFLDSLKL HHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LCSKHDQRDELAAIVERVESLGYRGEPYLIYAADHSAGFAESLTLLTSEGLCDTRWVDVS HHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEECC GDVTLRLLTPLKIMQDGRPSRTFSFPLLMRTLIRRISSLASYYCDDEILVDFRWLASLCE CCEEEEEECCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHH TVTVSGSSIQWVEWGGGKQGRKLAGLTGEAVLSSVPEEFIPFLLLGEFLNVGKGAAFGLG HEECCCCEEEEEEECCCCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCEECCC RFSIGANCP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA