| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is fbp [H]
Identifier: 78223565
GI number: 78223565
Start: 2670647
End: 2671120
Strand: Reverse
Name: fbp [H]
Synonym: Gmet_2362
Alternate gene names: 78223565
Gene position: 2671120-2670647 (Counterclockwise)
Preceding gene: 78223566
Following gene: 78223564
Centisome position: 66.82
GC content: 63.71
Gene sequence:
>474_bases GTGAGATCCGTTGAAAAGTTGCTCGTTCTGTTTCTCTTTGTCACCGGGGTTGCCATTGCCGCGTGTTCCGACAAGGACGC GAAGTCCTTGGGGGAGGCCAAGCCCGCCGCCGTTTCCACGGCGCCGGCTGGAGCCGTCACGACACCGTCGGGGCTTTCCT ACGTGGATCTCGTTGTCGGCAACGGCCCCCAGCCGACCTCGGGCAAGCCCGTGAAGGTTCACTATACCGGCTGGCTCGAG AATGGCACCAAGTTCGACAGCTCCGTGGACCGGGGCGAGCCCTTTGTCTTTACCATTGGCGCCGGCGAGGTGATCCCCGG CTGGGACGAAGGGGTGATGACCATGAAGGTGGGGGGCAAACGGCGTCTCATCGTGCCGGCCCAACTCGGGTATGGCGCTG CCGGGGCCGGCGGCGTGATCCCCCCCAACGCGACCCTCATATTTGAAGTGGAACTGCTCGAGGCTGCGAAGTAA
Upstream 100 bases:
>100_bases GCTTCTCAAGAGGAGCCGCCTGTCGGTTCAGCCGGTGACGCAACACGAGTGGGAATACATCCTCCGCCTGGGCGGAATTG ATTGAAGCAGGGAGGTTTAC
Downstream 100 bases:
>100_bases CCGACGCTTCATGTTGCACAACTGAACTGCCAGGGAGGGCTTATGCGGTTTCTGATCGTTGCGGTCATGCTATTTGTGGT TGTGTCACCTGCGGTTGCGG
Product: peptidylprolyl isomerase, FKBP-type
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRSVEKLLVLFLFVTGVAIAACSDKDAKSLGEAKPAAVSTAPAGAVTTPSGLSYVDLVVGNGPQPTSGKPVKVHYTGWLE NGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMTMKVGGKRRLIVPAQLGYGAAGAGGVIPPNATLIFEVELLEAAK
Sequences:
>Translated_157_residues MRSVEKLLVLFLFVTGVAIAACSDKDAKSLGEAKPAAVSTAPAGAVTTPSGLSYVDLVVGNGPQPTSGKPVKVHYTGWLE NGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMTMKVGGKRRLIVPAQLGYGAAGAGGVIPPNATLIFEVELLEAAK >Mature_157_residues MRSVEKLLVLFLFVTGVAIAACSDKDAKSLGEAKPAAVSTAPAGAVTTPSGLSYVDLVVGNGPQPTSGKPVKVHYTGWLE NGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMTMKVGGKRRLIVPAQLGYGAAGAGGVIPPNATLIFEVELLEAAK
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI224809329, Length=135, Percent_Identity=45.9259259259259, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI224809327, Length=135, Percent_Identity=45.9259259259259, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI4758384, Length=135, Percent_Identity=45.9259259259259, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI224809331, Length=135, Percent_Identity=45.9259259259259, Blast_Score=106, Evalue=7e-24, Organism=Homo sapiens, GI206725530, Length=91, Percent_Identity=52.7472527472528, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI17149844, Length=91, Percent_Identity=52.7472527472528, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI17149842, Length=91, Percent_Identity=52.7472527472528, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI17149836, Length=90, Percent_Identity=54.4444444444444, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI4503725, Length=90, Percent_Identity=54.4444444444444, Blast_Score=105, Evalue=1e-23, Organism=Homo sapiens, GI4503729, Length=90, Percent_Identity=55.5555555555556, Blast_Score=105, Evalue=2e-23, Organism=Homo sapiens, GI4758380, Length=89, Percent_Identity=56.1797752808989, Blast_Score=104, Evalue=3e-23, Organism=Homo sapiens, GI192448443, Length=87, Percent_Identity=51.7241379310345, Blast_Score=91, Evalue=3e-19, Organism=Homo sapiens, GI8923659, Length=85, Percent_Identity=50.5882352941176, Blast_Score=82, Evalue=2e-16, Organism=Homo sapiens, GI33469985, Length=88, Percent_Identity=46.5909090909091, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI4503727, Length=137, Percent_Identity=35.7664233576642, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI150010552, Length=102, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=1e-14, Organism=Homo sapiens, GI7706131, Length=124, Percent_Identity=37.0967741935484, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI206725547, Length=153, Percent_Identity=32.0261437908497, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI31317231, Length=154, Percent_Identity=32.4675324675325, Blast_Score=70, Evalue=7e-13, Organism=Homo sapiens, GI219842220, Length=112, Percent_Identity=37.5, Blast_Score=67, Evalue=9e-12, Organism=Escherichia coli, GI87082390, Length=111, Percent_Identity=51.3513513513513, Blast_Score=103, Evalue=5e-24, Organism=Escherichia coli, GI1789745, Length=156, Percent_Identity=40.3846153846154, Blast_Score=90, Evalue=7e-20, Organism=Caenorhabditis elegans, GI71993519, Length=93, Percent_Identity=58.0645161290323, Blast_Score=106, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17561782, Length=91, Percent_Identity=58.2417582417582, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17540882, Length=94, Percent_Identity=47.8723404255319, Blast_Score=97, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17561778, Length=127, Percent_Identity=33.0708661417323, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17506169, Length=89, Percent_Identity=37.0786516853933, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17506167, Length=89, Percent_Identity=37.0786516853933, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71993555, Length=105, Percent_Identity=38.0952380952381, Blast_Score=66, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17561780, Length=91, Percent_Identity=38.4615384615385, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324194, Length=90, Percent_Identity=57.7777777777778, Blast_Score=108, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320727, Length=88, Percent_Identity=57.9545454545455, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323482, Length=103, Percent_Identity=46.6019417475728, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323566, Length=103, Percent_Identity=46.6019417475728, Blast_Score=90, Evalue=2e-19, Organism=Drosophila melanogaster, GI281363946, Length=88, Percent_Identity=59.0909090909091, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI17352457, Length=88, Percent_Identity=59.0909090909091, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI24655568, Length=105, Percent_Identity=55.2380952380952, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI24647110, Length=119, Percent_Identity=47.8991596638655, Blast_Score=105, Evalue=9e-24, Organism=Drosophila melanogaster, GI24583150, Length=89, Percent_Identity=53.9325842696629, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI21356629, Length=88, Percent_Identity=56.8181818181818, Blast_Score=89, Evalue=1e-18,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 16129; Mature: 16129
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSVEKLLVLFLFVTGVAIAACSDKDAKSLGEAKPAAVSTAPAGAVTTPSGLSYVDLVVG CCHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCEEECCCCCCEECCCCCEEEEEEEC NGPQPTSGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMTMKVGGK CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCC RRLIVPAQLGYGAAGAGGVIPPNATLIFEVELLEAAK EEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure MRSVEKLLVLFLFVTGVAIAACSDKDAKSLGEAKPAAVSTAPAGAVTTPSGLSYVDLVVG CCHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCEEECCCCCCEECCCCCEEEEEEEC NGPQPTSGKPVKVHYTGWLENGTKFDSSVDRGEPFVFTIGAGEVIPGWDEGVMTMKVGGK CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCC RRLIVPAQLGYGAAGAGGVIPPNATLIFEVELLEAAK EEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]