| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78223564
Identifier: 78223564
GI number: 78223564
Start: 2669624
End: 2670604
Strand: Reverse
Name: 78223564
Synonym: Gmet_2361
Alternate gene names: NA
Gene position: 2670604-2669624 (Counterclockwise)
Preceding gene: 78223565
Following gene: 78223563
Centisome position: 66.81
GC content: 59.63
Gene sequence:
>981_bases ATGCGGTTTCTGATCGTTGCGGTCATGCTATTTGTGGTTGTGTCACCTGCGGTTGCGGCTTCTAAAAACGTAACCTACTT CCTTGATGGCACTCGGGTCGAAGGTGTGGCTTCAGCCCCCAAAGGGTACCTGGAGCTGCCACTCCCCGGCAACTACATCC CCGGCTCGTTTCGAGTACGCCCCGCAGGGTCAGTGCCTGTAGCGCGGGTGGATGTTGTCCCCGCACGGCCTGACTCCAAG GCTGAAAAAGAGATGAAGGATCTCATGGAACGGCGCCGCACCCTGGAAGACCGGTTGAAGGCCCTGGACGTCCGCCAGGA GATTTTCAAGGCCGCAGCCAAATCCCAGAGCAGTAAAGCCCCCCGTAAGACTAAGAATAATCCCCAGCCCCTCGACACCA TCAGAAAAGGGACCGACTACGCCGTGACCCAACTGGAGGAGGTCTACCGTGGGCGTCGCCGCGCAGAGGAGGGGCTCAAG ACGGTCGATGCCCGCATCGAAGCCCTGAAGAAGGAAGGGGGAATCGGCGGAAGCGTGGCTCGCGTATGGCTCTCTGGAAA GGGAAGCGCTTCCTACAGTTTTCTCACCACGGGAACCGGTTGGACCCCTTTCTACGATTTCAGACTCAGGGGGAACGGTA TGGTTGAGGTAACGGTTAAGGCTCAGCTTCCTGGCGTCCAGCGGGACAAGGTGTCGGTCGTGGCCCAGAATGTCGTTGAT GCGACCCCGGATGTCCAGGCAGTTTCCGTTTCCTCCAACCTCGCGCCGGTTGCCAGATTTTCTCTCCCCGTTGAGAGAGA AGAGCCCTTCCGGGCTCCCCAGAGCGGGGTGAGCTTCGCCTTCAGAAACACGACCGGCGAGCGTCTCATGGCAGGTGGCG GTGCCTGCTACCTGAACGGAGAGTATCTGGGGGCGGTCCGCTTCGAGGGGAGTTCGTCCGGAGAGTTGAAAGATGTTGTG GCGGGAAGGCTTCAGGAGTAA
Upstream 100 bases:
>100_bases GATCCCCCCCAACGCGACCCTCATATTTGAAGTGGAACTGCTCGAGGCTGCGAAGTAACCGACGCTTCATGTTGCACAAC TGAACTGCCAGGGAGGGCTT
Downstream 100 bases:
>100_bases GGACTGGCACCGGGATCTCCCGAAAGTTCCCGGTTTTATCTTGACTTGGCTTTGCCCGTGGGCTAATTTGCGGGTTTGTT AAACCGGTCGAAACCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRFLIVAVMLFVVVSPAVAASKNVTYFLDGTRVEGVASAPKGYLELPLPGNYIPGSFRVRPAGSVPVARVDVVPARPDSK AEKEMKDLMERRRTLEDRLKALDVRQEIFKAAAKSQSSKAPRKTKNNPQPLDTIRKGTDYAVTQLEEVYRGRRRAEEGLK TVDARIEALKKEGGIGGSVARVWLSGKGSASYSFLTTGTGWTPFYDFRLRGNGMVEVTVKAQLPGVQRDKVSVVAQNVVD ATPDVQAVSVSSNLAPVARFSLPVEREEPFRAPQSGVSFAFRNTTGERLMAGGGACYLNGEYLGAVRFEGSSSGELKDVV AGRLQE
Sequences:
>Translated_326_residues MRFLIVAVMLFVVVSPAVAASKNVTYFLDGTRVEGVASAPKGYLELPLPGNYIPGSFRVRPAGSVPVARVDVVPARPDSK AEKEMKDLMERRRTLEDRLKALDVRQEIFKAAAKSQSSKAPRKTKNNPQPLDTIRKGTDYAVTQLEEVYRGRRRAEEGLK TVDARIEALKKEGGIGGSVARVWLSGKGSASYSFLTTGTGWTPFYDFRLRGNGMVEVTVKAQLPGVQRDKVSVVAQNVVD ATPDVQAVSVSSNLAPVARFSLPVEREEPFRAPQSGVSFAFRNTTGERLMAGGGACYLNGEYLGAVRFEGSSSGELKDVV AGRLQE >Mature_326_residues MRFLIVAVMLFVVVSPAVAASKNVTYFLDGTRVEGVASAPKGYLELPLPGNYIPGSFRVRPAGSVPVARVDVVPARPDSK AEKEMKDLMERRRTLEDRLKALDVRQEIFKAAAKSQSSKAPRKTKNNPQPLDTIRKGTDYAVTQLEEVYRGRRRAEEGLK TVDARIEALKKEGGIGGSVARVWLSGKGSASYSFLTTGTGWTPFYDFRLRGNGMVEVTVKAQLPGVQRDKVSVVAQNVVD ATPDVQAVSVSSNLAPVARFSLPVEREEPFRAPQSGVSFAFRNTTGERLMAGGGACYLNGEYLGAVRFEGSSSGELKDVV AGRLQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35372; Mature: 35372
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLIVAVMLFVVVSPAVAASKNVTYFLDGTRVEGVASAPKGYLELPLPGNYIPGSFRVR CHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEECCCCCCCCCEEECCCCCCCCCCCEEEC PAGSVPVARVDVVPARPDSKAEKEMKDLMERRRTLEDRLKALDVRQEIFKAAAKSQSSKA CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRKTKNNPQPLDTIRKGTDYAVTQLEEVYRGRRRAEEGLKTVDARIEALKKEGGIGGSVA CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE RVWLSGKGSASYSFLTTGTGWTPFYDFRLRGNGMVEVTVKAQLPGVQRDKVSVVAQNVVD EEEECCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHC ATPDVQAVSVSSNLAPVARFSLPVEREEPFRAPQSGVSFAFRNTTGERLMAGGGACYLNG CCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCEEEECC EYLGAVRFEGSSSGELKDVVAGRLQE CEEEEEEECCCCCCCHHHHHHHHCCC >Mature Secondary Structure MRFLIVAVMLFVVVSPAVAASKNVTYFLDGTRVEGVASAPKGYLELPLPGNYIPGSFRVR CHHHHHHHHHHHHHCCHHHCCCCEEEEECCCEECCCCCCCCCEEECCCCCCCCCCCEEEC PAGSVPVARVDVVPARPDSKAEKEMKDLMERRRTLEDRLKALDVRQEIFKAAAKSQSSKA CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRKTKNNPQPLDTIRKGTDYAVTQLEEVYRGRRRAEEGLKTVDARIEALKKEGGIGGSVA CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE RVWLSGKGSASYSFLTTGTGWTPFYDFRLRGNGMVEVTVKAQLPGVQRDKVSVVAQNVVD EEEECCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHC ATPDVQAVSVSSNLAPVARFSLPVEREEPFRAPQSGVSFAFRNTTGERLMAGGGACYLNG CCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCEEEECC EYLGAVRFEGSSSGELKDVVAGRLQE CEEEEEEECCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA